Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006048.1-P | Field mustard | cytosol | 70.07 | 66.67 |
| CDY14541 | Canola | nucleus | 99.27 | 44.3 |
| CDY08819 | Canola | nucleus | 100.0 | 42.68 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 29.93 | 39.05 |
| AT5G65120.1 | Thale cress | nucleus | 79.56 | 34.38 |
| Bra037805.1-P | Field mustard | cytosol | 71.53 | 33.22 |
| KRH43214 | Soybean | nucleus | 45.99 | 21.0 |
| VIT_00s1188g00010.t01 | Wine grape | cytosol | 53.28 | 19.89 |
| KRH59375 | Soybean | nucleus | 40.15 | 19.23 |
| Os02t0752300-01 | Rice | nucleus | 44.53 | 18.54 |
| Zm00001d052230_P001 | Maize | nucleus | 42.34 | 17.52 |
| OQU85411 | Sorghum | nucleus | 41.61 | 17.17 |
| Solyc04g054900.2.1 | Tomato | nucleus | 43.8 | 16.71 |
| PGSC0003DMT400053153 | Potato | nucleus | 43.07 | 16.39 |
| TraesCS6B01G331200.2 | Wheat | cytosol, mitochondrion, nucleus | 36.5 | 15.58 |
| TraesCS6D01G281500.1 | Wheat | cytosol, nucleus, plastid | 36.5 | 15.58 |
| TraesCS6A01G302100.1 | Wheat | cytosol | 35.04 | 13.95 |
| HORVU0Hr1G017100.2 | Barley | cytosol | 35.77 | 13.57 |
| VIT_00s0662g00020.t01 | Wine grape | cytosol, nucleus | 21.9 | 7.81 |
Protein Annotations
Description
AT5G65120 (E=2e-057) | unknown protein
Coordinates
chrA06:+:15145637..15146347
Molecular Weight (calculated)
15524.2 Da
IEP (calculated)
6.502
GRAVY (calculated)
-0.716
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRCSAVDNN MDADDELKSC SCSFCLKAAY IWSDLHYQDI KGRLSVLKKS QKEASSLIRR NGKGRPTDVY GSENSNNSTN VEFDVMGQWT SLFLNMEGIL
101: ARESSHLQDS FVTMKELREN CKIDLERATK TPQQNNT
101: ARESSHLQDS FVTMKELREN CKIDLERATK TPQQNNT
001: MTGDWCSLVV SKETRVALCD MTNLPSKRGL SAILGDLLLK SGDDSGKSLA AREGSGVKFS KRLCLVVDDL VKESTRTSDT NEASSSEDKI SYDCDSENLD
101: VKESQGETNA GDIDVEPSKD DTVKETCEKD SNMNVCGSQT DAVTSEDLAM TLFSSNNNES EGLLVPNPQA IKSFNMNRCS NVDGMGIVNH HMEADGELKS
201: CSCSFCLTAA YIWSDLHYQD IKGRLSVLKK SQKEASGLIQ RNDRGTPTDI YGSENSNNST NTDNPMEQWT SLFRNMEGIL ARESNHLHNS FVAMKELREN
301: CKIDLERATK TSQQNNT
101: VKESQGETNA GDIDVEPSKD DTVKETCEKD SNMNVCGSQT DAVTSEDLAM TLFSSNNNES EGLLVPNPQA IKSFNMNRCS NVDGMGIVNH HMEADGELKS
201: CSCSFCLTAA YIWSDLHYQD IKGRLSVLKK SQKEASGLIQ RNDRGTPTDI YGSENSNNST NTDNPMEQWT SLFRNMEGIL ARESNHLHNS FVAMKELREN
301: CKIDLERATK TSQQNNT
Arabidopsis Description
At5g65120 [Source:UniProtKB/TrEMBL;Acc:B4F7Q0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.