Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59375 | Soybean | nucleus | 78.0 | 81.82 |
| Bra024356.1-P | Field mustard | cytosol | 21.0 | 45.99 |
| Bra006048.1-P | Field mustard | cytosol | 21.67 | 45.14 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 14.33 | 40.95 |
| CDX78368 | Canola | nucleus | 29.0 | 30.85 |
| CDX81159 | Canola | nucleus | 28.67 | 30.18 |
| VIT_00s1188g00010.t01 | Wine grape | cytosol | 35.33 | 28.88 |
| CDY14541 | Canola | nucleus | 29.33 | 28.66 |
| CDY18686 | Canola | cytosol | 27.67 | 28.14 |
| CDY08819 | Canola | nucleus | 30.0 | 28.04 |
| Bra037805.1-P | Field mustard | cytosol | 27.33 | 27.8 |
| CDX81268 | Canola | nucleus | 27.67 | 27.3 |
| AT5G10110.1 | Thale cress | nucleus | 29.0 | 27.1 |
| AT5G65120.1 | Thale cress | nucleus | 28.33 | 26.81 |
| Os02t0752300-01 | Rice | nucleus | 27.33 | 24.92 |
| Zm00001d052230_P001 | Maize | nucleus | 26.0 | 23.57 |
| OQU85411 | Sorghum | nucleus | 26.0 | 23.49 |
| TraesCS6B01G331200.2 | Wheat | cytosol, mitochondrion, nucleus | 24.0 | 22.43 |
| TraesCS6D01G281500.1 | Wheat | cytosol, nucleus, plastid | 23.67 | 22.12 |
| TraesCS6A01G302100.1 | Wheat | cytosol | 24.0 | 20.93 |
| Solyc04g054900.2.1 | Tomato | nucleus | 25.0 | 20.89 |
| PGSC0003DMT400053153 | Potato | nucleus | 24.33 | 20.28 |
| HORVU0Hr1G017100.2 | Barley | cytosol | 23.33 | 19.39 |
| VIT_00s0662g00020.t01 | Wine grape | cytosol, nucleus | 22.33 | 17.45 |
Protein Annotations
| EMBL:ACUP02004851 | EnsemblPlants:KRH43214 | EnsemblPlantsGene:GLYMA_08G137700 | EntrezGene:100819376 | PANTHER:PTHR33924 | PANTHER:PTHR33924:SF2 |
| ProteinID:KRH43214 | ProteinID:KRH43214.1 | SEG:seg | UniParc:UPI0002337DE7 | UniProt:I1KT43 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr8:-:10561330..10563938
Molecular Weight (calculated)
33386.3 Da
IEP (calculated)
5.799
GRAVY (calculated)
-0.604
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNDNFGDG IFKTRPHLAD VTNLPAKRSF SLVSGDGGDL QFTKKIRLGV ENLAKGKSQM QFGAHAYLNN EVLLQPKEKH TILLPFSDDT LHSFQNPSLT
101: VEGMEEQNPL DLENFKFGKE GDGIVATDRA VESGGKDICD VENLGSPKCG AEQMPTISVS NDSNFLGLKP CSSSVTEAAD LKSCTCSFCS KAGYIWSDLH
201: YQDAKGRLSA IKKSQKEAKM IIQKFSGLEN TVMHDQHRSE ESLKLELSLV HQWKSLFLQM QNMYTQESSQ LETSFETLKN LRENCKTDLE LNDNSHHQNQ
101: VEGMEEQNPL DLENFKFGKE GDGIVATDRA VESGGKDICD VENLGSPKCG AEQMPTISVS NDSNFLGLKP CSSSVTEAAD LKSCTCSFCS KAGYIWSDLH
201: YQDAKGRLSA IKKSQKEAKM IIQKFSGLEN TVMHDQHRSE ESLKLELSLV HQWKSLFLQM QNMYTQESSQ LETSFETLKN LRENCKTDLE LNDNSHHQNQ
001: MTGDWCSLVV SKETRVALCD MTNLPSKRGL SAILGDLLLK SGDDSGKSLA AREGSGVKFS KRLCLVVDDL VKESTRTSDT NEASSSEDKI SYDCDSENLD
101: VKESQGETNA GDIDVEPSKD DTVKETCEKD SNMNVCGSQT DAVTSEDLAM TLFSSNNNES EGLLVPNPQA IKSFNMNRCS NVDGMGIVNH HMEADGELKS
201: CSCSFCLTAA YIWSDLHYQD IKGRLSVLKK SQKEASGLIQ RNDRGTPTDI YGSENSNNST NTDNPMEQWT SLFRNMEGIL ARESNHLHNS FVAMKELREN
301: CKIDLERATK TSQQNNT
101: VKESQGETNA GDIDVEPSKD DTVKETCEKD SNMNVCGSQT DAVTSEDLAM TLFSSNNNES EGLLVPNPQA IKSFNMNRCS NVDGMGIVNH HMEADGELKS
201: CSCSFCLTAA YIWSDLHYQD IKGRLSVLKK SQKEASGLIQ RNDRGTPTDI YGSENSNNST NTDNPMEQWT SLFRNMEGIL ARESNHLHNS FVAMKELREN
301: CKIDLERATK TSQQNNT
Arabidopsis Description
At5g65120 [Source:UniProtKB/TrEMBL;Acc:B4F7Q0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.