Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18686 | Canola | cytosol | 92.54 | 92.54 |
| Bra024356.1-P | Field mustard | cytosol | 33.22 | 71.53 |
| Bra006048.1-P | Field mustard | cytosol | 29.15 | 59.72 |
| AT5G65120.1 | Thale cress | nucleus | 56.27 | 52.37 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 12.54 | 35.24 |
| Os02t0752300-01 | Rice | nucleus | 30.51 | 27.36 |
| KRH43214 | Soybean | nucleus | 27.8 | 27.33 |
| Zm00001d052230_P001 | Maize | nucleus | 29.49 | 26.28 |
| KRH59375 | Soybean | nucleus | 25.42 | 26.22 |
| VIT_00s1188g00010.t01 | Wine grape | cytosol | 31.19 | 25.07 |
| OQU85411 | Sorghum | nucleus | 28.14 | 25.0 |
| TraesCS6B01G331200.2 | Wheat | cytosol, mitochondrion, nucleus | 26.78 | 24.61 |
| TraesCS6D01G281500.1 | Wheat | cytosol, nucleus, plastid | 26.44 | 24.3 |
| TraesCS6A01G302100.1 | Wheat | cytosol | 25.76 | 22.09 |
| HORVU0Hr1G017100.2 | Barley | cytosol | 26.1 | 21.33 |
| Solyc04g054900.2.1 | Tomato | nucleus | 24.75 | 20.33 |
| PGSC0003DMT400053153 | Potato | nucleus | 24.75 | 20.28 |
| VIT_00s0662g00020.t01 | Wine grape | cytosol, nucleus | 18.31 | 14.06 |
Protein Annotations
Description
AT5G65120 (E=1e-074) | unknown protein
Coordinates
chrA09:+:3652374..3653521
Molecular Weight (calculated)
32336.6 Da
IEP (calculated)
4.357
GRAVY (calculated)
-0.516
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGDSCSLVS KETRLPLCDM TIVPSKRGLS SILSDFLLKS GDDSGKTFAR EGSGVKFSKR LCLVVDDLVK ESTRSTDTND GSLVVDADSE NLKESQGETN
101: AVDGIRVGDD AVVELSQREC DNKGSNVADF ASQTDAVTGE DLKETLYGSS NRESDDRLAM VATEGTGVLP VDSVGIVNHD MEADDELRSC SCSFCLKAAY
201: IWSDLNYQDI KGRLSVLKKS QKETSSLIQR NSKEEPTDVE FDVMGQWTSL FLNMNDILAR EGSRLQDSFV AMKELRENCK IDLERATKPP QHNNS
101: AVDGIRVGDD AVVELSQREC DNKGSNVADF ASQTDAVTGE DLKETLYGSS NRESDDRLAM VATEGTGVLP VDSVGIVNHD MEADDELRSC SCSFCLKAAY
201: IWSDLNYQDI KGRLSVLKKS QKETSSLIQR NSKEEPTDVE FDVMGQWTSL FLNMNDILAR EGSRLQDSFV AMKELRENCK IDLERATKPP QHNNS
001: MTGDWCSLVV SKETRVALCD MTNLPSKRGL SAILGDLLLK SGDDSGKSLA AREGSGVKFS KRLCLVVDDL VKESTRTSDT NEASSSEDKI SYDCDSENLD
101: VKESQGETNA GDIDVEPSKD DTVKETCEKD SNMNVCGSQT DAVTSEDLAM TLFSSNNNES EGLLVPNPQA IKSFNMNRCS NVDGMGIVNH HMEADGELKS
201: CSCSFCLTAA YIWSDLHYQD IKGRLSVLKK SQKEASGLIQ RNDRGTPTDI YGSENSNNST NTDNPMEQWT SLFRNMEGIL ARESNHLHNS FVAMKELREN
301: CKIDLERATK TSQQNNT
101: VKESQGETNA GDIDVEPSKD DTVKETCEKD SNMNVCGSQT DAVTSEDLAM TLFSSNNNES EGLLVPNPQA IKSFNMNRCS NVDGMGIVNH HMEADGELKS
201: CSCSFCLTAA YIWSDLHYQD IKGRLSVLKK SQKEASGLIQ RNDRGTPTDI YGSENSNNST NTDNPMEQWT SLFRNMEGIL ARESNHLHNS FVAMKELREN
301: CKIDLERATK TSQQNNT
Arabidopsis Description
At5g65120 [Source:UniProtKB/TrEMBL;Acc:B4F7Q0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.