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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G389600.1 Wheat cytosol 77.26 76.54
HORVU2Hr1G093140.1 Barley cytosol 76.95 76.23
TraesCS5B01G240000.1 Wheat cytosol 75.08 74.61
TraesCS4B01G135300.1 Wheat cytosol 73.52 73.52
TraesCS5A01G242600.1 Wheat cytosol 73.83 73.15
TraesCS2D01G389500.1 Wheat cytosol 67.91 72.19
Zm00001d005909_P001 Maize plasma membrane 80.37 71.47
KXG35783 Sorghum extracellular, vacuole 80.37 71.07
TraesCS5B01G240800.1 Wheat extracellular, golgi 81.0 70.65
TraesCS2B01G409800.1 Wheat cytosol 72.9 70.27
TraesCS5A01G242800.1 Wheat extracellular, plasma membrane 80.37 69.73
TraesCS5D01G249400.1 Wheat endoplasmic reticulum, plasma membrane 79.75 68.45
HORVU0Hr1G013160.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 51.4 63.46
TraesCS4D01G130000.1 Wheat extracellular, vacuole 72.9 62.9
HORVU0Hr1G013200.3 Barley plastid 66.98 57.49
TraesCS4A01G183300.2 Wheat extracellular, golgi 74.14 57.21
Os09t0461700-01 Rice cytosol 48.6 48.9
GSMUA_Achr6P04360_001 Banana cytosol 44.55 48.81
GSMUA_Achr6P04230_001 Banana cytosol 35.51 48.72
GSMUA_Achr7P12950_001 Banana cytosol 46.73 46.44
GSMUA_Achr3P06860_001 Banana cytosol 35.2 46.12
VIT_03s0063g00750.t01 Wine grape cytosol 45.79 45.51
VIT_03s0063g00740.t01 Wine grape cytosol 45.48 45.34
Os02t0567800-01 Rice cytosol 44.24 44.38
Os09t0460700-01 Rice cytosol 42.68 43.91
KRH50255 Soybean cytosol 41.43 43.75
Os09t0460500-00 Rice cytosol 42.37 43.45
KRH71164 Soybean cytosol 40.81 43.09
Os09t0462200-01 Rice cytosol, extracellular 44.86 42.86
AT2G03550.1 Thale cress cytosol 41.43 42.63
CDX77920 Canola cytosol 41.43 42.63
VIT_03s0063g00820.t01 Wine grape cytosol 39.88 42.52
AT3G48690.1 Thale cress cytosol 42.68 42.28
Os06t0214800-01 Rice cytosol 43.3 42.25
Os09t0455500-01 Rice cytosol 42.06 42.19
KRH50256 Soybean cytosol 41.74 42.14
PGSC0003DMT400091080 Potato cytosol 40.81 41.99
Os09t0461500-01 Rice golgi, mitochondrion 45.48 41.95
VIT_03s0063g00720.t01 Wine grape cytosol 42.06 41.8
PGSC0003DMT400066386 Potato cytosol 40.5 41.67
Solyc01g108570.2.1 Tomato cytosol, extracellular 40.19 41.61
Os09t0460400-01 Rice cytosol 40.81 41.59
VIT_03s0063g00730.t01 Wine grape cytosol 41.43 41.56
PGSC0003DMT400066392 Potato cytosol 40.5 41.53
CDY37916 Canola cytosol 41.74 41.49
VIT_03s0063g00700.t01 Wine grape cytosol 41.74 41.49
Bra025117.1-P Field mustard cytosol 39.25 41.45
Os08t0475100-01 Rice extracellular 42.99 41.44
Solyc01g108540.2.1 Tomato cytosol 39.88 41.42
Solyc01g108580.2.1 Tomato cytosol 40.19 41.35
Os06t0214300-01 Rice plasma membrane, plastid 41.43 41.3
Solyc01g108560.2.1 Tomato cytosol, plastid 38.63 41.2
Bra019558.1-P Field mustard cytosol 41.43 41.18
Os08t0474866-00 Rice extracellular 47.35 41.08
Os09t0455900-01 Rice cytosol, plasma membrane 40.81 41.07
VIT_03s0063g00800.t01 Wine grape cytosol 38.32 41.0
KRH71162 Soybean cytosol, nucleus 42.37 40.84
Os09t0462100-01 Rice plasma membrane 48.29 40.79
AT3G48700.1 Thale cress cytosol 41.74 40.73
KRH71161 Soybean cytosol 34.58 40.66
Os06t0214850-00 Rice plasma membrane 43.93 40.06
Bra018807.1-P Field mustard cytosol 40.5 39.88
CDY51035 Canola cytosol 40.5 39.88
CDX83045 Canola cytosol 40.19 39.81
Bra040667.1-P Field mustard cytosol 39.56 39.81
PGSC0003DMT400066389 Potato cytosol 36.14 39.73
Bra029913.1-P Field mustard cytosol 40.19 39.57
CDY28094 Canola cytosol 39.56 39.56
PGSC0003DMT400066384 Potato cytosol 25.23 39.51
CDY29339 Canola cytosol 39.25 39.5
VIT_03s0063g00830.t01 Wine grape cytosol 37.07 39.4
CDX68486 Canola cytosol 39.56 39.32
VIT_03s0063g00810.t01 Wine grape cytosol 38.32 39.3
CDY20870 Canola cytosol 38.94 39.19
Os08t0475400-02 Rice cytosol, plasma membrane 39.88 39.14
PGSC0003DMT400066385 Potato cytosol 37.38 39.09
Solyc01g108530.2.1 Tomato cytosol 37.38 39.09
CDY67024 Canola cytosol 39.25 39.01
AT1G49660.1 Thale cress cytosol 38.63 38.87
KRH71163 Soybean cytosol 36.45 38.74
Bra029912.1-P Field mustard cytosol 38.94 38.7
AT1G19190.1 Thale cress cytosol 38.32 38.68
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 36.14 38.67
CDY41024 Canola peroxisome 38.63 38.39
Solyc10g050880.1.1 Tomato cytosol 36.76 37.82
CDY28098 Canola cytosol 37.69 37.58
Bra016519.1-P Field mustard cytosol 38.01 37.31
PGSC0003DMT400088862 Potato cytosol 39.88 37.21
CDY51033 Canola cytosol 37.07 37.19
Bra025714.1-P Field mustard cytosol 27.41 36.97
CDX96674 Canola cytosol 37.38 36.92
Bra018809.1-P Field mustard cytosol 36.14 36.71
VIT_03s0063g00790.t01 Wine grape cytosol 34.27 36.54
CDY02986 Canola cytosol 39.88 36.26
KRH50257 Soybean cytosol 36.45 36.0
Os08t0475000-00 Rice cytosol 38.32 35.86
AT1G49640.1 Thale cress cytosol 34.89 35.56
Bra018808.1-P Field mustard plastid 40.19 33.86
CDY51034 Canola plastid 39.88 33.68
Os09t0460300-01 Rice plastid 40.5 33.59
PGSC0003DMT400066383 Potato cytosol 31.78 33.55
CDY28095 Canola plastid 39.56 33.42
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 32.71 33.33
CDY16521 Canola mitochondrion 39.25 33.16
AT1G49650.1 Thale cress mitochondrion 38.63 33.16
Bra014213.1-P Field mustard mitochondrion 38.94 32.89
KRH71160 Soybean nucleus 40.19 32.82
CDY32845 Canola mitochondrion 37.07 32.51
VIT_03s0063g00770.t01 Wine grape plastid 38.94 30.05
Os07t0501400-00 Rice plastid 39.56 28.35
Os07t0526600-01 Rice extracellular 37.38 26.09
Os09t0435700-00 Rice mitochondrion 33.64 25.35
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 39.88 20.78
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1InterPro:AB_hydrolaseInterPro:AB_hydrolase_3ProteinID:BAD38544.1ProteinID:BAH94601.1
ProteinID:BAT08482.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0016787InterPro:IPR029058EnsemblPlantsGene:Os09g0461900EnsemblPlants:Os09t0461900-01PFAM:PF07859PANTHER:PTHR23024
PANTHER:PTHR23024:SF171UniProt:Q67IZ7SUPFAM:SSF53474UniParc:UPI00004265A7SEG:seg:
Description
Alpha/beta hydrolase fold-3 domain containing protein. (Os09t0461900-01)
Coordinates
chr9:-:17460792..17462020
Molecular Weight (calculated)
34203.4 Da
IEP (calculated)
5.369
GRAVY (calculated)
-0.074
Length
321 amino acids
Sequence
(BLAST)
001: MDAAASEIEF DMPGVLRMYK DGRVERFDGT QTVPPSPSGD PANGVVSKDV VLDPAAGISA RLYLPPGVEP GKKLPVVLFF HGGAFLVHTA ASPLYHRYAA
101: SLAAAVPAVV VSADYRLAPE QPVPAAYDDA FAALRAVVAA CRPDGAEPWL AAHGDASRVV LAGDSAGANM AHNAAIRLRK EGIEGYGDKV SGVVLLHPYF
201: WGKDPVGGES TDAGYRGSFH GTWEFVSAGK LGLDHPCVNP LASPEEWRQL GAGRVLVTTA EHCWFVERAR AYAEGIKKCG WDGEVELHET DGEGHVFFLP
301: KPDCDNAVKE LAVVTDFVRR C
Best Arabidopsis Sequence Match ( AT2G03550.1 )
(BLAST)
001: MDSVIAFDRS PMFRVYKSGR IERLLGETTV PPSLTPQNGV VSKDIIHSPE KNLSLRIYLP EKVTVKKLPI LIYFHGGGFI IETAFSPPYH TFLTSAVAAA
101: NCLAISVNYR RAPEFPVPIP YEDSWDSLKW VLTHITGTGP ETWINKHGDF GKVFLAGDSA GGNISHHLTM RAKKEKLCDS LISGIILIHP YFWSKTPIDE
201: FEVRDVGKTK GVEGSWRVAS PNSKQGVDDP WLNVVGSDPS GLGCGRVLVM VAGDDLFVRQ GWCYAEKLKK SGWEGEVEVM ETKNEGHVFH LKNPNSDNAR
301: QVVKKLEEFI NK
Arabidopsis Description
CXE7Probable carboxylesterase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ91]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.