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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
Os02t0752300-01
Os12t0209700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 Os12t0209700-01 AT4G10930.1 21798944
AT3G48690.1 Os02t0752300-01 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G005140.1 Barley extracellular 64.59 75.63
Zm00001d050479_P001 Maize extracellular, plasma membrane, vacuole 73.51 71.77
TraesCS2D01G360900.1 Wheat extracellular 74.86 70.3
TraesCS2B01G381300.1 Wheat vacuole 74.59 70.23
OQU80637 Sorghum plasma membrane 74.32 69.44
EES15127 Sorghum extracellular 68.65 67.73
GSMUA_Achr6P04360_001 Banana cytosol 44.59 56.31
Os08t0475100-01 Rice extracellular 49.19 54.65
Os09t0461500-01 Rice golgi, mitochondrion 51.08 54.31
TraesCS2A01G363400.1 Wheat endoplasmic reticulum, extracellular, vacuole 59.73 54.3
Os06t0214300-01 Rice plasma membrane, plastid 46.76 53.73
Os09t0462100-01 Rice plasma membrane 54.86 53.42
GSMUA_Achr3P06860_001 Banana cytosol 35.14 53.06
GSMUA_Achr7P12950_001 Banana cytosol 45.95 52.63
GSMUA_Achr6P04230_001 Banana cytosol 32.7 51.71
Os09t0461700-01 Rice cytosol 41.35 47.96
Os09t0461900-01 Rice cytosol, plasma membrane 41.08 47.35
Os09t0460700-01 Rice cytosol 38.11 45.19
Os09t0460400-01 Rice cytosol 38.11 44.76
Os09t0460500-00 Rice cytosol 37.84 44.73
Os06t0214800-01 Rice cytosol 39.73 44.68
VIT_03s0063g00750.t01 Wine grape cytosol 38.92 44.58
Os08t0475000-00 Rice cytosol 41.08 44.31
Os09t0462200-01 Rice cytosol, extracellular 39.46 43.45
CDX77920 Canola cytosol 36.49 43.27
Solyc01g108560.2.1 Tomato cytosol, plastid 35.14 43.19
VIT_03s0063g00820.t01 Wine grape cytosol 35.14 43.19
Bra019558.1-P Field mustard cytosol 37.57 43.03
CDY37916 Canola cytosol 37.57 43.03
Solyc01g108570.2.1 Tomato cytosol, extracellular 35.95 42.9
VIT_03s0063g00740.t01 Wine grape cytosol 37.3 42.86
Os08t0475400-02 Rice cytosol, plasma membrane 37.84 42.81
PGSC0003DMT400066392 Potato cytosol 36.22 42.81
PGSC0003DMT400066389 Potato cytosol 33.78 42.81
Bra025117.1-P Field mustard cytosol 35.14 42.76
KRH71164 Soybean cytosol 35.14 42.76
CDX83045 Canola cytosol 37.3 42.59
Os09t0455500-01 Rice cytosol 36.76 42.5
VIT_03s0063g00720.t01 Wine grape cytosol 37.03 42.41
Bra029913.1-P Field mustard cytosol 37.3 42.33
VIT_03s0063g00730.t01 Wine grape cytosol 36.49 42.19
VIT_03s0063g00700.t01 Wine grape cytosol 36.76 42.11
Os06t0214850-00 Rice plasma membrane 40.0 42.05
Os09t0455900-01 Rice cytosol, plasma membrane 36.22 42.01
VIT_03s0063g00800.t01 Wine grape cytosol 34.05 42.0
AT3G48690.1 Thale cress cytosol 36.76 41.98
Os02t0567800-01 Rice cytosol 36.22 41.88
Solyc01g108540.2.1 Tomato cytosol 34.86 41.75
PGSC0003DMT400066386 Potato cytosol 35.14 41.67
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 33.78 41.67
CDX68486 Canola cytosol 36.22 41.49
VIT_03s0063g00830.t01 Wine grape cytosol 33.78 41.39
CDY67024 Canola cytosol 35.95 41.18
KRH50255 Soybean cytosol 33.78 41.12
AT3G48700.1 Thale cress cytosol 36.49 41.03
PGSC0003DMT400091080 Potato cytosol 34.59 41.03
VIT_03s0063g00810.t01 Wine grape cytosol 34.59 40.89
Bra029912.1-P Field mustard cytosol 35.41 40.56
KRH71162 Soybean cytosol, nucleus 36.49 40.54
AT1G49660.1 Thale cress cytosol 34.86 40.44
KRH50256 Soybean cytosol 34.59 40.25
PGSC0003DMT400066385 Potato cytosol 33.24 40.07
AT2G03550.1 Thale cress cytosol 33.78 40.06
VIT_03s0063g00790.t01 Wine grape cytosol 32.43 39.87
Solyc01g108580.2.1 Tomato cytosol 33.51 39.74
Solyc01g108530.2.1 Tomato cytosol 32.97 39.74
KRH71161 Soybean cytosol 29.19 39.56
PGSC0003DMT400066384 Potato cytosol 21.89 39.51
Bra040667.1-P Field mustard cytosol 33.78 39.19
CDY28098 Canola cytosol 34.05 39.13
Bra025714.1-P Field mustard cytosol 25.14 39.08
Solyc10g050880.1.1 Tomato cytosol 32.7 38.78
CDY51033 Canola cytosol 33.51 38.75
CDY28094 Canola cytosol 33.51 38.63
CDY29339 Canola cytosol 33.24 38.56
PGSC0003DMT400088862 Potato cytosol 35.68 38.37
KRH71163 Soybean cytosol 31.08 38.08
Bra018807.1-P Field mustard cytosol 33.51 38.04
Bra018809.1-P Field mustard cytosol 32.43 37.97
AT1G19190.1 Thale cress cytosol 32.43 37.74
CDY51035 Canola cytosol 33.24 37.73
CDY02986 Canola cytosol 35.95 37.68
CDY20870 Canola cytosol 32.43 37.62
CDY41024 Canola peroxisome 32.43 37.15
PGSC0003DMT400066383 Potato cytosol 30.0 36.51
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 31.08 36.51
Os09t0460300-01 Rice plastid 38.11 36.43
AT1G49640.1 Thale cress cytosol 30.81 36.19
KRH50257 Soybean cytosol 31.35 35.69
CDX96674 Canola cytosol 31.08 35.38
Bra016519.1-P Field mustard cytosol 30.54 34.56
AT1G49650.1 Thale cress mitochondrion 34.86 34.49
CDY16521 Canola mitochondrion 35.14 34.21
CDY51034 Canola plastid 35.14 34.21
Bra018808.1-P Field mustard plastid 35.14 34.12
Bra014213.1-P Field mustard mitochondrion 34.86 33.95
CDY28095 Canola plastid 34.59 33.68
CDY32845 Canola mitochondrion 32.97 33.33
KRH71160 Soybean nucleus 35.41 33.33
VIT_03s0063g00770.t01 Wine grape plastid 36.22 32.21
Os07t0526600-01 Rice extracellular 37.57 30.22
Os07t0501400-00 Rice plastid 36.49 30.13
Os09t0435700-00 Rice mitochondrion 32.97 28.64
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 39.73 23.86
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1EntrezGene:4345820InterPro:AB_hydrolaseInterPro:AB_hydrolase_3ProteinID:BAF23945.2
ProteinID:BAT05874.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0016787InterPro:IPR029058EnsemblPlantsGene:Os08g0474866EnsemblPlants:Os08t0474866-00PFAM:PF07859PANTHER:PTHR23024
PANTHER:PTHR23024:SF146UniProt:Q0J520SUPFAM:SSF53474SignalP:SignalP-noTMUniParc:UPI0000F143CFRefSeq:XP_015650239.1
RefSeq:XP_015650240.1SEG:seg::::
Description
Similar to gibberellin receptor GID1L2. (Os08t0474866-00)
Coordinates
chr8:-:23403049..23404168
Molecular Weight (calculated)
39399.9 Da
IEP (calculated)
6.522
GRAVY (calculated)
0.033
Length
370 amino acids
Sequence
(BLAST)
001: MAASISSALL LLLNMAGALL SPRAPPPAPA ALTGAGDGED VDFFFFPFLV LYKSGRVVRF IGTDTVPASM DPATGVASKD VVIDADAGLA VRLYLPNVAN
101: LTAGKRGGGD KLPVVVFYHG GGFVTESAFS PTYHRYLNAL VSKARVVAVS VEYHLAPEHR LPRAYDDAWA ALRWVLENAG AGPEPWLSRH GDTARLFLVG
201: DSAGGNIAHN VAMRAGGEGG LHGGAAIRGV ALLDPYFWGK RPVPSETADP ATRRWRERTW GFVCAGRYEV DDPVIDPVAM ARGEWRRLGR ARVLVTVASL
301: DTLSARGRAY VAAARASGWG GEAVLYETPG ENHVYFLVEP DGEKAAKEMD AVVAFINEGE QVITASRMDA
Best Arabidopsis Sequence Match ( AT3G48700.1 )
(BLAST)
001: MDSEIAADYS PMLIIYKSGR IERLVGETTV PPSSNPQNGV VSKDVVYSPD NNLSLRIYLP EKAATAETEA SVKLPLLVYF HGGGFLVETA FSPTYHTFLT
101: AAVSASDCVA VSVDYRRAPE HPIPTSYDDS WTALKWVFSH IAGSGSEDWL NKHADFSKVF LAGDSAGANI THHMTMKAAK DKLSPESLNE SGISGIILVH
201: PYFWSKTPVD DKETTDVAIR TWIESVWTLA SPNSKDGSDD PFINVVQSES VDLSGLGCGK VLVMVAEKDA LVRQGWGYWE KLGKSRWNGE VLDVVETKGE
301: GHVFHLRDPN SEKAHELVHR FAGFIKGDK
Arabidopsis Description
CXE13Probable carboxylesterase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.