Factsheet for Os06t0214850-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 1
nucleus 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
YLoc:	peroxisome

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0752300-01
Os12t0209700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	Os12t0209700-01	AT4G10930.1	21798944
AT3G48690.1	Os02t0752300-01	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G173800.1	Wheat	golgi	69.89	78.1
Zm00001d037180_P001	Maize	cytosol, extracellular	69.6	75.38
HORVU0Hr1G019700.1	Barley	cytosol, mitochondrion	50.28	73.44
GSMUA_Achr3P06860_001	Banana	cytosol	33.24	47.76
GSMUA_Achr6P04360_001	Banana	cytosol	39.49	47.44
Os06t0214800-01	Rice	cytosol	44.32	47.42
Os09t0462200-01	Rice	cytosol, extracellular	44.03	46.13
VIT_03s0063g00720.t01	Wine grape	cytosol	41.76	45.51
GSMUA_Achr6P04230_001	Banana	cytosol	30.11	45.3
VIT_03s0063g00700.t01	Wine grape	cytosol	41.48	45.2
Os02t0567800-01	Rice	cytosol	40.91	45.0
KRH71162	Soybean	cytosol, nucleus	42.05	44.44
Os09t0461900-01	Rice	cytosol, plasma membrane	40.06	43.93
Os09t0461700-01	Rice	cytosol	39.77	43.89
GSMUA_Achr7P12950_001	Banana	cytosol	39.49	43.03
VIT_03s0063g00750.t01	Wine grape	cytosol	39.49	43.03
Os06t0214300-01	Rice	plasma membrane, plastid	39.2	42.86
KRH50256	Soybean	cytosol	38.64	42.77
Os08t0475400-02	Rice	cytosol, plasma membrane	39.49	42.51
VIT_03s0063g00730.t01	Wine grape	cytosol	38.64	42.5
VIT_03s0063g00830.t01	Wine grape	cytosol	36.36	42.38
Os09t0455900-01	Rice	cytosol, plasma membrane	38.35	42.32
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	35.8	42.0
VIT_03s0063g00800.t01	Wine grape	cytosol	35.8	42.0
Os09t0461500-01	Rice	golgi, mitochondrion	41.48	41.95
VIT_03s0063g00790.t01	Wine grape	cytosol	35.8	41.86
KRH71164	Soybean	cytosol	36.08	41.78
Solyc01g108580.2.1	Tomato	cytosol	36.93	41.67
PGSC0003DMT400091080	Potato	cytosol	36.93	41.67
Os09t0460500-00	Rice	cytosol	36.93	41.53
PGSC0003DMT400066384	Potato	cytosol	24.15	41.46
Os09t0460700-01	Rice	cytosol	36.65	41.35
KRH50255	Soybean	cytosol	35.51	41.12
Solyc01g108540.2.1	Tomato	cytosol	36.08	41.1
PGSC0003DMT400066386	Potato	cytosol	36.08	40.71
VIT_03s0063g00740.t01	Wine grape	cytosol	37.22	40.68
Solyc01g108570.2.1	Tomato	cytosol, extracellular	35.8	40.65
VIT_03s0063g00810.t01	Wine grape	cytosol	36.08	40.58
Os09t0455500-01	Rice	cytosol	36.65	40.31
VIT_03s0063g00820.t01	Wine grape	cytosol	34.38	40.2
CDX77920	Canola	cytosol	35.51	40.06
Os08t0474866-00	Rice	extracellular	42.05	40.0
KRH71161	Soybean	cytosol	30.97	39.93
PGSC0003DMT400066383	Potato	cytosol	34.38	39.8
PGSC0003DMT400066385	Potato	cytosol	34.66	39.74
Os08t0475100-01	Rice	extracellular	37.5	39.64
Solyc10g050880.1.1	Tomato	cytosol	34.94	39.42
PGSC0003DMT400066392	Potato	cytosol	34.94	39.3
Solyc01g108560.2.1	Tomato	cytosol, plastid	33.52	39.2
CDY37916	Canola	cytosol	35.8	39.01
Solyc01g108530.2.1	Tomato	cytosol	33.81	38.76
KRH71163	Soybean	cytosol	33.24	38.74
Os09t0460400-01	Rice	cytosol	34.66	38.73
Bra019558.1-P	Field mustard	cytosol	35.51	38.7
PGSC0003DMT400066389	Potato	cytosol	32.1	38.7
Bra025117.1-P	Field mustard	cytosol	32.95	38.16
AT2G03550.1	Thale cress	cytosol	33.81	38.14
AT1G19190.1	Thale cress	cytosol	34.38	38.05
AT3G48700.1	Thale cress	cytosol	35.23	37.69
AT3G48690.1	Thale cress	cytosol	34.66	37.65
Os09t0462100-01	Rice	plasma membrane	40.62	37.63
AT1G49660.1	Thale cress	cytosol	34.09	37.62
CDY51033	Canola	cytosol	34.09	37.5
CDX83045	Canola	cytosol	34.38	37.35
CDY67024	Canola	cytosol	34.09	37.15
Bra029912.1-P	Field mustard	cytosol	34.09	37.15
Bra029913.1-P	Field mustard	cytosol	34.38	37.12
Bra040667.1-P	Field mustard	cytosol	33.52	36.99
CDY29339	Canola	cytosol	33.52	36.99
Bra025714.1-P	Field mustard	cytosol	25.0	36.97
CDY41024	Canola	peroxisome	33.81	36.84
CDX68486	Canola	cytosol	33.52	36.53
CDY28094	Canola	cytosol	33.24	36.45
CDY20870	Canola	cytosol	32.95	36.36
PGSC0003DMT400088862	Potato	cytosol	35.51	36.34
CDY28098	Canola	cytosol	33.24	36.34
KRH50257	Soybean	cytosol	33.52	36.31
AT1G49640.1	Thale cress	cytosol	32.39	36.19
CDX96674	Canola	cytosol	33.24	36.0
Bra018807.1-P	Field mustard	cytosol	33.24	35.89
Bra018809.1-P	Field mustard	cytosol	32.1	35.76
CDY51035	Canola	cytosol	32.67	35.28
Bra016519.1-P	Field mustard	cytosol	32.67	35.17
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	30.68	34.29
Os08t0475000-00	Rice	cytosol	32.67	33.53
KRH71160	Soybean	nucleus	37.22	33.33
VIT_03s0063g00770.t01	Wine grape	plastid	39.2	33.17
CDY02986	Canola	cytosol	33.24	33.14
CDY16521	Canola	mitochondrion	35.23	32.63
Bra014213.1-P	Field mustard	mitochondrion	34.94	32.37
AT1G49650.1	Thale cress	mitochondrion	34.38	32.35
CDY32845	Canola	mitochondrion	32.95	31.69
Os09t0460300-01	Rice	plastid	34.38	31.27
Bra018808.1-P	Field mustard	plastid	33.81	31.23
CDY51034	Canola	plastid	32.95	30.53
CDY28095	Canola	plastid	32.67	30.26
Os07t0501400-00	Rice	plastid	37.78	29.69
Os09t0435700-00	Rice	mitochondrion	33.81	27.93
Os07t0526600-01	Rice	extracellular	34.38	26.3
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	37.22	21.27

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A0P0WTX9	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	ProteinID:BAS96768.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787
InterPro:IPR029058	EnsemblPlantsGene:Os06g0214850	EnsemblPlants:Os06t0214850-00	PFAM:PF07859	PANTHER:PTHR23024	PANTHER:PTHR23024:SF154
SUPFAM:SSF53474	UniParc:UPI000393AD80	SEG:seg	:	:	:

Description

Similar to gibberellin receptor GID1L2. (Os06t0214850-00)

Coordinates

chr6:-:5837535..5838622

Molecular Weight (calculated)

37872.6 Da

IEP (calculated)

5.221

GRAVY (calculated)

-0.063

Length

352 amino acids

Sequence
(BLAST)

001: SELDFFLSFQ LDLLQVANSF PSPDPATNRS PSAMDPDSEV AFDFQPYLCQ YKSGRVFRLG GDPTVPAGTD PVTRVVSRDI HAGAARARVY LPPGAAVSTE
101: KLPVVVYFHG GGFVTGSPAR PSTHAYLNDL VARAGAIGVS VYYRLAPENP LPAAYEDAWA AVRWAATRGD GADPWLLDHA DLSRLFLAGC SAGANIAHNM
201: AVRCGGGGAL PDGVTLRGLV VVHPYFTGKE AVGAEAAFGP DVREFFDRTW RFVFPETSGL DDPRVNPFVD DATRAAAAAI PCERVQVCVA EQDVLLKERG
301: LWYHRELKAS GYGGEVELFE SKGVGHAFHF VGMAGSDQAV ELLERNVEFI KK

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.