CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	OQU84317	AT4G10930.1	21798944
AT3G48690.1	OQU85411	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15127	Sorghum	extracellular	82.32	86.93
Zm00001d050479_P001	Maize	extracellular, plasma membrane, vacuole	80.05	83.64
Os08t0474866-00	Rice	extracellular	69.44	74.32
HORVU0Hr1G005140.1	Barley	extracellular	59.09	74.05
TraesCS2D01G360900.1	Wheat	extracellular	66.92	67.26
TraesCS2B01G381300.1	Wheat	vacuole	66.67	67.18
GSMUA_Achr6P04360_001	Banana	cytosol	40.4	54.61
KXG35780	Sorghum	extracellular, vacuole	48.74	54.52
EES14010	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.48	54.08
GSMUA_Achr3P06860_001	Banana	cytosol	33.08	53.47
KXG25394	Sorghum	cytosol	44.44	53.33
KXG35785	Sorghum	extracellular, golgi, vacuole	50.25	52.79
GSMUA_Achr7P12950_001	Banana	cytosol	42.68	52.32
TraesCS2A01G363400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.28	51.84
GSMUA_Achr6P04230_001	Banana	cytosol	30.56	51.71
KXG19591	Sorghum	cytosol	40.91	50.0
EER99019	Sorghum	cytosol	39.14	47.4
KXG35781	Sorghum	cytosol	36.62	46.33
EER88163	Sorghum	cytosol	36.87	46.06
KXG25323	Sorghum	cytosol	38.13	45.76
EES16153	Sorghum	cytosol	38.38	45.37
VIT_03s0063g00750.t01	Wine grape	cytosol	36.62	44.89
EER89413	Sorghum	cytosol	38.13	44.41
EER88069	Sorghum	cytosol	37.12	44.14
KXG35783	Sorghum	extracellular, vacuole	40.4	44.08
VIT_03s0063g00720.t01	Wine grape	cytosol	35.86	43.96
KXG35760	Sorghum	cytosol	35.86	43.83
VIT_03s0063g00700.t01	Wine grape	cytosol	35.61	43.65
KXG21709	Sorghum	cytosol, mitochondrion, plastid	30.81	43.57
CDX77920	Canola	cytosol	34.09	43.27
Solyc01g108560.2.1	Tomato	cytosol, plastid	32.83	43.19
VIT_03s0063g00730.t01	Wine grape	cytosol	34.85	43.12
AT1G49660.1	Thale cress	cytosol	34.6	42.95
Solyc01g108570.2.1	Tomato	cytosol, extracellular	33.59	42.9
AT3G48690.1	Thale cress	cytosol	35.1	42.9
OQU80639	Sorghum	cytosol	36.11	42.81
PGSC0003DMT400066389	Potato	cytosol	31.57	42.81
Bra025117.1-P	Field mustard	cytosol	32.83	42.76
KRH50255	Soybean	cytosol	32.83	42.76
CDX83045	Canola	cytosol	34.85	42.59
VIT_03s0063g00820.t01	Wine grape	cytosol	32.32	42.52
KRH71164	Soybean	cytosol	32.58	42.43
Bra019558.1-P	Field mustard	cytosol	34.6	42.41
CDY37916	Canola	cytosol	34.6	42.41
Bra029913.1-P	Field mustard	cytosol	34.85	42.33
VIT_03s0063g00740.t01	Wine grape	cytosol	34.34	42.24
PGSC0003DMT400066392	Potato	cytosol	33.33	42.17
OQU89622	Sorghum	cytosol	33.84	42.14
KXG35782	Sorghum	cytosol	35.86	42.14
VIT_03s0063g00800.t01	Wine grape	cytosol	31.82	42.0
Solyc01g108540.2.1	Tomato	cytosol	32.58	41.75
PGSC0003DMT400066386	Potato	cytosol	32.83	41.67
PGSC0003DMT400091080	Potato	cytosol	32.83	41.67
CDX68486	Canola	cytosol	33.84	41.49
KXG35761	Sorghum	cytosol	34.09	41.41
PGSC0003DMT400066385	Potato	cytosol	32.07	41.37
AT3G48700.1	Thale cress	cytosol	34.34	41.34
VIT_03s0063g00810.t01	Wine grape	cytosol	32.58	41.21
OQU85176	Sorghum	plastid	35.35	41.06
Solyc01g108530.2.1	Tomato	cytosol	31.82	41.04
PGSC0003DMT400066384	Potato	cytosol	21.21	40.98
CDY67024	Canola	cytosol	33.33	40.87
Solyc01g108580.2.1	Tomato	cytosol	32.07	40.71
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	30.81	40.67
Bra040667.1-P	Field mustard	cytosol	32.58	40.44
VIT_03s0063g00830.t01	Wine grape	cytosol	30.81	40.4
EER96865	Sorghum	cytosol	33.33	40.37
KRH50256	Soybean	cytosol	32.32	40.25
CDY29339	Canola	cytosol	32.32	40.13
Bra029912.1-P	Field mustard	cytosol	32.58	39.94
CDY28094	Canola	cytosol	32.32	39.88
KXG26418	Sorghum	cytosol	33.08	39.46
CDY28098	Canola	cytosol	32.07	39.44
AT2G03550.1	Thale cress	cytosol	30.81	39.1
KRH71163	Soybean	cytosol	29.8	39.07
CDY51033	Canola	cytosol	31.31	38.75
KRH71162	Soybean	cytosol, nucleus	32.58	38.74
CDY20870	Canola	cytosol	31.06	38.56
Solyc10g050880.1.1	Tomato	cytosol	30.3	38.46
PGSC0003DMT400088862	Potato	cytosol	33.33	38.37
Bra018807.1-P	Field mustard	cytosol	31.57	38.34
Bra018809.1-P	Field mustard	cytosol	30.56	38.29
Bra025714.1-P	Field mustard	cytosol	22.98	38.24
VIT_03s0063g00790.t01	Wine grape	cytosol	29.04	38.21
KRH71161	Soybean	cytosol	26.26	38.1
CDY51035	Canola	cytosol	31.31	38.04
CDX96674	Canola	cytosol	31.06	37.85
PGSC0003DMT400066383	Potato	cytosol	29.04	37.83
AT1G49640.1	Thale cress	cytosol	30.05	37.78
AT1G19190.1	Thale cress	cytosol	30.3	37.74
OQU81663	Sorghum	cytosol	33.84	37.64
CDY41024	Canola	peroxisome	30.56	37.46
CDY02986	Canola	cytosol	33.33	37.39
Bra016519.1-P	Field mustard	cytosol	30.56	37.0
OQU89623	Sorghum	mitochondrion	35.61	36.91
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	29.04	36.51
CDY16521	Canola	mitochondrion	34.85	36.32
Bra018808.1-P	Field mustard	plastid	34.85	36.22
AT1G49650.1	Thale cress	mitochondrion	34.09	36.1
OQU76051	Sorghum	golgi, plasma membrane, vacuole	44.19	36.08
CDY32845	Canola	mitochondrion	33.33	36.07
Bra014213.1-P	Field mustard	mitochondrion	34.6	36.05
KRH50257	Soybean	cytosol	29.55	36.0
CDY51034	Canola	plastid	34.09	35.53
CDY28095	Canola	plastid	33.59	35.0
KRH71160	Soybean	nucleus	34.09	34.35
VIT_03s0063g00770.t01	Wine grape	plastid	34.09	32.45
EER97903	Sorghum	cytosol	36.87	32.23
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	36.87	23.7

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	EntrezGene:8083543	UniProt:A0A1Z5RA98	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058
EnsemblPlants:OQU80637	ProteinID:OQU80637	ProteinID:OQU80637.1	PFAM:PF07859	PANTHER:PTHR23024	PANTHER:PTHR23024:SF146
EnsemblPlantsGene:SORBI_3007G157100	SUPFAM:SSF53474	SignalP:SignalP-noTM	UniParc:UPI0001A87CE9	RefSeq:XP_002445635.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:59142059..59143249

Molecular Weight (calculated)

42235.6 Da

IEP (calculated)

5.001

GRAVY (calculated)

-0.067

Length

396 amino acids

Sequence
(BLAST)

001: MAGSFSSALL LLLNMAGALL APPALPPGPA AASVVSNGAT DDDGDVDFFF FPFLVLYKSG RVQRFMGTDT VPASTDPATG VASRDVVVLD ASAAAAAAGL
101: AVRLYLPPSR LATNRTGTDA DDESERLPLL VFYHGGAFVT ESAFSPTYHR YLNALVSRAQ VLAVSVEYHL APEHRLPTAY DDAWAALRWA LANARARAAG
201: SDSDPWLSRH ADPARLFLGG DSAGGNIAHY VALRAGREGL DSGGAGAGAA ATIRGLALLD PYFWGKRPVP SETSDEDTRR ERERTWSFVC GGRYGIDDPV
301: INPVAMAAEE WRRLPCARVL VTVAGLDMLS ARGRAYVHAL RASGWQGAAE LYETPGEYHV YFLNKPDSDE AAKEMEVVVD FINGDQVSSR ASRMDA

Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)

001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA

Arabidopsis Description

CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.