CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	OQU84317	AT4G10930.1	21798944
AT3G48690.1	OQU85411	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0460700-01	Rice	cytosol	67.61	68.91
Os09t0460500-00	Rice	cytosol	66.98	68.05
KXG35781	Sorghum	cytosol	53.77	54.63
OQU89623	Sorghum	mitochondrion	64.78	53.93
EER88163	Sorghum	cytosol	50.31	50.47
GSMUA_Achr6P04360_001	Banana	cytosol	46.23	50.17
GSMUA_Achr6P04230_001	Banana	cytosol	35.53	48.29
GSMUA_Achr3P06860_001	Banana	cytosol	35.53	46.12
KXG35761	Sorghum	cytosol	46.54	45.4
KXG35760	Sorghum	cytosol	45.28	44.44
KXG25394	Sorghum	cytosol	45.28	43.64
KXG19591	Sorghum	cytosol	44.34	43.52
KXG35782	Sorghum	cytosol	45.6	43.03
KXG26418	Sorghum	cytosol	44.65	42.77
GSMUA_Achr7P12950_001	Banana	cytosol	43.4	42.72
EER99019	Sorghum	cytosol	43.71	42.51
VIT_03s0063g00800.t01	Wine grape	cytosol	39.62	42.0
OQU85176	Sorghum	plastid	44.97	41.94
OQU80639	Sorghum	cytosol	44.03	41.92
PGSC0003DMT400066385	Potato	cytosol	39.62	41.04
PGSC0003DMT400066384	Potato	cytosol	26.42	40.98
EER88069	Sorghum	cytosol	42.77	40.84
Solyc01g108540.2.1	Tomato	cytosol	39.62	40.78
VIT_03s0063g00700.t01	Wine grape	cytosol	41.2	40.56
VIT_03s0063g00720.t01	Wine grape	cytosol	41.2	40.56
OQU81663	Sorghum	cytosol	45.28	40.45
VIT_03s0063g00790.t01	Wine grape	cytosol	38.05	40.2
AT3G48690.1	Thale cress	cytosol	40.88	40.12
Solyc01g108530.2.1	Tomato	cytosol	38.68	40.07
PGSC0003DMT400066386	Potato	cytosol	39.31	40.06
EER89413	Sorghum	cytosol	42.77	40.0
VIT_03s0063g00730.t01	Wine grape	cytosol	40.25	40.0
EER96865	Sorghum	cytosol	40.88	39.76
CDX77920	Canola	cytosol	38.99	39.74
PGSC0003DMT400091080	Potato	cytosol	38.99	39.74
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	37.42	39.67
KXG21709	Sorghum	cytosol, mitochondrion, plastid	34.91	39.64
Bra019558.1-P	Field mustard	cytosol	40.25	39.63
CDY37916	Canola	cytosol	40.25	39.63
VIT_03s0063g00750.t01	Wine grape	cytosol	40.25	39.63
KRH50256	Soybean	cytosol	39.62	39.62
PGSC0003DMT400066392	Potato	cytosol	38.99	39.62
VIT_03s0063g00810.t01	Wine grape	cytosol	38.99	39.62
VIT_03s0063g00740.t01	Wine grape	cytosol	39.94	39.44
VIT_03s0063g00830.t01	Wine grape	cytosol	37.42	39.4
Solyc01g108570.2.1	Tomato	cytosol, extracellular	38.36	39.35
AT3G48700.1	Thale cress	cytosol	40.57	39.21
Solyc01g108560.2.1	Tomato	cytosol, plastid	37.11	39.2
VIT_03s0063g00820.t01	Wine grape	cytosol	37.11	39.2
Solyc01g108580.2.1	Tomato	cytosol	38.36	39.1
Bra025117.1-P	Field mustard	cytosol	36.79	38.49
KRH71163	Soybean	cytosol	36.48	38.41
PGSC0003DMT400066389	Potato	cytosol	35.22	38.36
CDX83045	Canola	cytosol	38.99	38.27
EES16153	Sorghum	cytosol	40.25	38.21
Solyc10g050880.1.1	Tomato	cytosol	37.42	38.14
CDY67024	Canola	cytosol	38.68	38.08
Bra029913.1-P	Field mustard	cytosol	38.99	38.04
KXG25323	Sorghum	cytosol	39.31	37.88
KXG35780	Sorghum	extracellular, vacuole	42.14	37.85
KRH50255	Soybean	cytosol	36.16	37.83
KRH71164	Soybean	cytosol	36.16	37.83
AT2G03550.1	Thale cress	cytosol	37.11	37.82
CDX68486	Canola	cytosol	38.36	37.77
KRH71161	Soybean	cytosol	32.39	37.73
Bra029912.1-P	Field mustard	cytosol	38.05	37.46
AT1G49660.1	Thale cress	cytosol	37.42	37.3
EES14010	Sorghum	endoplasmic reticulum, extracellular, vacuole	41.51	37.18
AT1G19190.1	Thale cress	cytosol	37.11	37.11
KRH71162	Soybean	cytosol, nucleus	38.68	36.94
KXG35783	Sorghum	extracellular, vacuole	42.14	36.91
Bra040667.1-P	Field mustard	cytosol	36.79	36.68
CDY28098	Canola	cytosol	37.11	36.65
AT1G49640.1	Thale cress	cytosol	36.16	36.51
CDY28094	Canola	cytosol	36.79	36.45
CDY20870	Canola	cytosol	36.48	36.36
EES15127	Sorghum	extracellular	42.77	36.27
CDY29339	Canola	cytosol	36.16	36.05
CDY51033	Canola	cytosol	36.16	35.94
PGSC0003DMT400066383	Potato	cytosol	34.28	35.86
Bra018809.1-P	Field mustard	cytosol	35.53	35.76
Bra018807.1-P	Field mustard	cytosol	36.48	35.58
CDX96674	Canola	cytosol	36.16	35.38
CDY51035	Canola	cytosol	36.16	35.28
PGSC0003DMT400088862	Potato	cytosol	38.05	35.17
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	34.59	34.92
Bra025714.1-P	Field mustard	cytosol	26.1	34.87
KRH50257	Soybean	cytosol	35.22	34.46
CDY41024	Canola	peroxisome	34.91	34.37
Bra016519.1-P	Field mustard	cytosol	35.22	34.25
CDY02986	Canola	cytosol	37.74	33.99
OQU80637	Sorghum	plasma membrane	42.14	33.84
KXG35785	Sorghum	extracellular, golgi, vacuole	39.94	33.69
AT1G49650.1	Thale cress	mitochondrion	38.05	32.35
KRH71160	Soybean	nucleus	39.62	32.06
CDY16521	Canola	mitochondrion	37.74	31.58
Bra014213.1-P	Field mustard	mitochondrion	37.42	31.32
CDY32845	Canola	mitochondrion	35.53	30.87
Bra018808.1-P	Field mustard	plastid	35.53	29.66
VIT_03s0063g00770.t01	Wine grape	plastid	38.68	29.57
CDY28095	Canola	plastid	35.22	29.47
CDY51034	Canola	plastid	34.59	28.95
OQU76051	Sorghum	golgi, plasma membrane, vacuole	44.03	28.87
EER97903	Sorghum	cytosol	38.99	27.37
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	41.82	21.59

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1W0W5H8	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS
EnsemblPlants:OQU89622	ProteinID:OQU89622	ProteinID:OQU89622.1	PFAM:PF07859	ScanProsite:PS01174	PANTHER:PTHR23024
PANTHER:PTHR23024:SF257	EnsemblPlantsGene:SORBI_3002G227800	SUPFAM:SSF53474	UniParc:UPI0009DC9059	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:61947278..61951741

Molecular Weight (calculated)

33658.4 Da

IEP (calculated)

4.600

GRAVY (calculated)

-0.004

Length

318 amino acids

Sequence
(BLAST)

001: MEPDADEVVF DAPGYFCMYK SGKIVRVSQP LAAAGVDDTS GVSSKDIVLD ADTGLSVRLF LPRRQGPSGK KLPVLVYFHG GGFLIGSAKF ATYHNYLTSL
101: ASAAGVLAVS VDYRLAPEHQ LPAAYDDCWA ALQWAASAQD DWIAEHGDAG RVFVAGDSAG GNIVHNVLMK ASTGGSSADN GGGAPRIEGA VFLHAFFGGR
201: TLIDGEPERA VAIAEKVWTF ACRDAADGAD DPWINPTAPG APSLERLGCQ RVLVCAAEKD WLAARDRAYY AALVDSAWPG SAEWLESSGE EHVFFVTKPE
301: CENAKQLMDR VAAFIAGA

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.