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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020740_P001 Maize cytosol 82.79 84.55
KXG35761 Sorghum cytosol 70.03 72.39
KXG35760 Sorghum cytosol 65.88 68.52
HORVU5Hr1G068140.1 Barley cytosol 63.5 66.05
TraesCS5B01G235400.1 Wheat cytosol 63.5 66.05
Os09t0455500-01 Rice cytosol 62.61 65.94
Os09t0455900-01 Rice cytosol, plasma membrane 61.72 65.2
TraesCS5D01G244200.1 Wheat cytosol 62.61 65.12
KXG35781 Sorghum cytosol 50.74 54.63
EER88163 Sorghum cytosol 48.96 52.05
GSMUA_Achr3P06860_001 Banana cytosol 36.5 50.2
GSMUA_Achr6P04230_001 Banana cytosol 34.12 49.15
GSMUA_Achr6P04360_001 Banana cytosol 41.25 47.44
EER99019 Sorghum cytosol 45.99 47.4
KXG19591 Sorghum cytosol 43.92 45.68
OQU89622 Sorghum cytosol 43.03 45.6
EER96865 Sorghum cytosol 42.73 44.04
EER88069 Sorghum cytosol 43.03 43.54
VIT_03s0063g00730.t01 Wine grape cytosol 41.25 43.44
KRH71164 Soybean cytosol 39.17 43.42
KRH50256 Soybean cytosol 40.95 43.4
EER89413 Sorghum cytosol 43.62 43.24
KXG25394 Sorghum cytosol 42.14 43.03
VIT_03s0063g00750.t01 Wine grape cytosol 40.95 42.72
EES16153 Sorghum cytosol 42.14 42.39
VIT_03s0063g00830.t01 Wine grape cytosol 37.98 42.38
OQU80639 Sorghum cytosol 41.84 42.22
OQU89623 Sorghum mitochondrion 47.77 42.15
VIT_03s0063g00720.t01 Wine grape cytosol 40.36 42.11
KXG26418 Sorghum cytosol 41.25 41.87
VIT_03s0063g00820.t01 Wine grape cytosol 37.39 41.86
VIT_03s0063g00700.t01 Wine grape cytosol 40.06 41.8
KRH50255 Soybean cytosol 37.69 41.78
VIT_03s0063g00790.t01 Wine grape cytosol 36.8 41.2
OQU85176 Sorghum plastid 41.54 41.06
PGSC0003DMT400066384 Potato cytosol 24.93 40.98
KXG25323 Sorghum cytosol 40.06 40.91
GSMUA_Achr7P12950_001 Banana cytosol 39.17 40.87
KXG35783 Sorghum extracellular, vacuole 43.92 40.77
KXG21709 Sorghum cytosol, mitochondrion, plastid 33.83 40.71
KXG35780 Sorghum extracellular, vacuole 42.73 40.68
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 36.2 40.67
VIT_03s0063g00800.t01 Wine grape cytosol 36.2 40.67
KRH71161 Soybean cytosol 32.94 40.66
Solyc01g108540.2.1 Tomato cytosol 37.09 40.45
PGSC0003DMT400066389 Potato cytosol 35.01 40.41
PGSC0003DMT400066385 Potato cytosol 36.8 40.39
PGSC0003DMT400091080 Potato cytosol 37.39 40.38
VIT_03s0063g00740.t01 Wine grape cytosol 38.58 40.37
Solyc01g108570.2.1 Tomato cytosol, extracellular 37.09 40.32
PGSC0003DMT400066392 Potato cytosol 37.39 40.26
VIT_03s0063g00810.t01 Wine grape cytosol 37.39 40.26
Solyc01g108530.2.1 Tomato cytosol 36.5 40.07
PGSC0003DMT400066386 Potato cytosol 36.8 39.74
Solyc01g108580.2.1 Tomato cytosol 36.8 39.74
Solyc01g108560.2.1 Tomato cytosol, plastid 35.31 39.53
CDY28094 Canola cytosol 37.39 39.25
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 41.25 39.15
KRH71162 Soybean cytosol, nucleus 38.58 39.04
EES15127 Sorghum extracellular 43.32 38.93
OQU81663 Sorghum cytosol 40.95 38.76
KRH71163 Soybean cytosol 34.72 38.74
Bra018807.1-P Field mustard cytosol 37.39 38.65
Solyc10g050880.1.1 Tomato cytosol 35.61 38.46
CDY51035 Canola cytosol 37.09 38.34
Bra040667.1-P Field mustard cytosol 36.2 38.24
CDY28098 Canola cytosol 36.5 38.2
CDY51033 Canola cytosol 36.2 38.12
CDY29339 Canola cytosol 35.91 37.93
Bra018809.1-P Field mustard cytosol 35.31 37.66
CDY20870 Canola cytosol 35.61 37.62
AT1G19190.1 Thale cress cytosol 35.31 37.42
Bra025117.1-P Field mustard cytosol 33.23 36.84
AT2G03550.1 Thale cress cytosol 33.83 36.54
AT3G48690.1 Thale cress cytosol 35.01 36.42
PGSC0003DMT400088862 Potato cytosol 37.09 36.34
CDX96674 Canola cytosol 35.01 36.31
AT1G49660.1 Thale cress cytosol 34.12 36.05
AT1G49640.1 Thale cress cytosol 33.53 35.87
OQU80637 Sorghum plasma membrane 42.14 35.86
CDX83045 Canola cytosol 34.42 35.8
CDX68486 Canola cytosol 34.12 35.6
Bra029913.1-P Field mustard cytosol 34.42 35.58
CDX77920 Canola cytosol 32.94 35.58
AT3G48700.1 Thale cress cytosol 34.72 35.56
KXG35785 Sorghum extracellular, golgi, vacuole 39.76 35.54
Bra016519.1-P Field mustard cytosol 34.42 35.47
Bra019558.1-P Field mustard cytosol 33.83 35.29
CDY41024 Canola peroxisome 33.83 35.29
CDY37916 Canola cytosol 33.53 34.98
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 32.64 34.92
PGSC0003DMT400066383 Potato cytosol 31.16 34.54
KRH50257 Soybean cytosol 33.23 34.46
Bra025714.1-P Field mustard cytosol 24.33 34.45
Bra029912.1-P Field mustard cytosol 32.64 34.06
CDY67024 Canola cytosol 32.05 33.44
CDY16521 Canola mitochondrion 37.69 33.42
Bra014213.1-P Field mustard mitochondrion 37.39 33.16
KRH71160 Soybean nucleus 37.98 32.57
CDY32845 Canola mitochondrion 35.31 32.51
CDY02986 Canola cytosol 33.53 32.01
Bra018808.1-P Field mustard plastid 35.91 31.76
CDY51034 Canola plastid 35.61 31.58
VIT_03s0063g00770.t01 Wine grape plastid 38.87 31.49
OQU76051 Sorghum golgi, plasma membrane, vacuole 44.81 31.13
CDY28095 Canola plastid 35.01 31.05
AT1G49650.1 Thale cress mitochondrion 34.42 31.02
EER97903 Sorghum cytosol 36.2 26.93
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 37.69 20.62
Protein Annotations
EnsemblPlants:KXG35782EnsemblPlantsGene:SORBI_3002G228100Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058PANTHER:PTHR23024
PANTHER:PTHR23024:SF192PFAM:PF07859ProteinID:KXG35782ProteinID:KXG35782.1SUPFAM:SSF53474UniParc:UPI00081AC4B9
UniProt:A0A1B6QCZ0MapMan:35.1::::
Description
hypothetical protein
Coordinates
chr2:-:61973783..61974796
Molecular Weight (calculated)
35717.8 Da
IEP (calculated)
5.054
GRAVY (calculated)
-0.080
Length
337 amino acids
Sequence
(BLAST)
001: MDSGSTEIVV DCGFFRIYSD GRVERFAGTE TVPAGFDADT GVTSKDVVID AAATGVATRL YLPTIHTDTA PSSPQSADTD NNSATTAKLP ILVVFHGGFF
101: VMSSPADPAF HRYMNSLVAT ARVVAVSVGY RLAPEHPLPA AYEDSWAALN WAVSGAADPW LSAHGDPGRV FVAGASAGAN IAHNMAIAAG ASGLLRAAEQ
201: EPPPRVEGVL LLHPSFAGEQ RMEEEEDGFW QANKRRWAAI FPGARDGLDD PRINPMAAGA PTLAKLVGER MLVCTASEDQ RAPRGRAYCE AVRASGWRGK
301: VEWFESQNEG HAFFVSGHGS PEAVALLDRV VAFIAGH
Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)
001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA
Arabidopsis Description
CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.