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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G315300.1 Wheat cytosol 64.61 71.43
KXG26418 Sorghum cytosol 64.61 69.28
TraesCS2A01G317400.1 Wheat mitochondrion, plastid 64.89 65.25
TraesCS2B01G335600.1 Wheat plastid 64.04 60.8
OQU85176 Sorghum plastid 53.93 56.3
GSMUA_Achr6P04360_001 Banana cytosol 40.73 49.49
KXG35781 Sorghum cytosol 42.98 48.88
EER88163 Sorghum cytosol 42.42 47.63
GSMUA_Achr3P06860_001 Banana cytosol 32.3 46.94
OQU89622 Sorghum cytosol 40.45 45.28
Solyc01g108570.2.1 Tomato cytosol, extracellular 39.33 45.16
PGSC0003DMT400066392 Potato cytosol 39.61 45.05
GSMUA_Achr6P04230_001 Banana cytosol 29.49 44.87
Solyc01g108540.2.1 Tomato cytosol 38.76 44.66
PGSC0003DMT400066386 Potato cytosol 38.76 44.23
PGSC0003DMT400091080 Potato cytosol 38.48 43.91
KXG35760 Sorghum cytosol 39.89 43.83
Solyc01g108580.2.1 Tomato cytosol 38.2 43.59
EER99019 Sorghum cytosol 39.61 43.12
KRH71162 Soybean cytosol, nucleus 40.17 42.94
Solyc01g108560.2.1 Tomato cytosol, plastid 36.24 42.86
GSMUA_Achr7P12950_001 Banana cytosol 38.76 42.72
KXG35761 Sorghum cytosol 39.04 42.64
VIT_03s0063g00720.t01 Wine grape cytosol 38.48 42.41
VIT_03s0063g00700.t01 Wine grape cytosol 38.2 42.11
VIT_03s0063g00830.t01 Wine grape cytosol 35.67 42.05
EER96865 Sorghum cytosol 38.48 41.9
KRH50256 Soybean cytosol 37.08 41.51
PGSC0003DMT400066389 Potato cytosol 33.99 41.44
OQU89623 Sorghum mitochondrion 44.38 41.36
PGSC0003DMT400088862 Potato cytosol 39.89 41.28
KXG25394 Sorghum cytosol 38.2 41.21
EER88069 Sorghum cytosol 38.48 41.14
KRH71163 Soybean cytosol 34.83 41.06
AT3G48700.1 Thale cress cytosol 37.92 41.03
CDX77920 Canola cytosol 35.96 41.03
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 34.55 41.0
PGSC0003DMT400066384 Potato cytosol 23.6 40.98
KXG35782 Sorghum cytosol 38.76 40.95
VIT_03s0063g00750.t01 Wine grape cytosol 37.08 40.87
AT3G48690.1 Thale cress cytosol 37.08 40.74
PGSC0003DMT400066385 Potato cytosol 35.11 40.72
VIT_03s0063g00730.t01 Wine grape cytosol 36.52 40.62
Bra019558.1-P Field mustard cytosol 36.8 40.56
Bra025117.1-P Field mustard cytosol 34.55 40.46
CDY37916 Canola cytosol 36.52 40.25
VIT_03s0063g00790.t01 Wine grape cytosol 33.99 40.2
KRH50255 Soybean cytosol 34.27 40.13
Solyc01g108530.2.1 Tomato cytosol 34.55 40.07
AT2G03550.1 Thale cress cytosol 35.11 40.06
KXG25323 Sorghum cytosol 37.08 40.0
KXG21709 Sorghum cytosol, mitochondrion, plastid 31.18 39.64
OQU80639 Sorghum cytosol 37.08 39.52
KRH71164 Soybean cytosol 33.71 39.47
VIT_03s0063g00740.t01 Wine grape cytosol 35.67 39.44
EER89413 Sorghum cytosol 37.64 39.41
EES16153 Sorghum cytosol 37.08 39.4
CDY67024 Canola cytosol 35.67 39.32
VIT_03s0063g00810.t01 Wine grape cytosol 34.55 39.3
KRH71161 Soybean cytosol 30.06 39.19
Bra029912.1-P Field mustard cytosol 35.39 39.01
CDX83045 Canola cytosol 35.39 38.89
KXG19591 Sorghum cytosol 35.39 38.89
Bra029913.1-P Field mustard cytosol 35.39 38.65
CDY20870 Canola cytosol 34.55 38.56
CDX68486 Canola cytosol 34.83 38.39
CDY41024 Canola peroxisome 34.83 38.39
VIT_03s0063g00800.t01 Wine grape cytosol 32.3 38.33
VIT_03s0063g00820.t01 Wine grape cytosol 32.3 38.21
Solyc10g050880.1.1 Tomato cytosol 33.43 38.14
Bra040667.1-P Field mustard cytosol 33.99 37.93
CDY29339 Canola cytosol 33.99 37.93
CDY28094 Canola cytosol 33.99 37.69
KRH50257 Soybean cytosol 34.27 37.54
Bra018807.1-P Field mustard cytosol 33.99 37.12
CDY51035 Canola cytosol 33.99 37.12
AT1G19190.1 Thale cress cytosol 33.15 37.11
AT1G49660.1 Thale cress cytosol 32.87 36.68
Bra025714.1-P Field mustard cytosol 24.44 36.55
Bra018809.1-P Field mustard cytosol 32.3 36.39
Bra016519.1-P Field mustard cytosol 33.15 36.09
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 35.96 36.06
CDY28098 Canola cytosol 32.3 35.71
CDY02986 Canola cytosol 35.39 35.69
CDX96674 Canola cytosol 32.58 35.69
KXG35780 Sorghum extracellular, vacuole 35.39 35.59
AT1G49640.1 Thale cress cytosol 31.46 35.56
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 31.46 35.56
PGSC0003DMT400066383 Potato cytosol 30.34 35.53
EES15127 Sorghum extracellular 37.36 35.47
CDY51033 Canola cytosol 31.74 35.31
KXG35783 Sorghum extracellular, vacuole 35.67 34.99
KXG35785 Sorghum extracellular, golgi, vacuole 36.24 34.22
KRH71160 Soybean nucleus 37.36 33.84
OQU80637 Sorghum plasma membrane 37.64 33.84
CDY16521 Canola mitochondrion 34.83 32.63
Bra014213.1-P Field mustard mitochondrion 34.55 32.37
AT1G49650.1 Thale cress mitochondrion 33.43 31.82
CDY32845 Canola mitochondrion 32.3 31.42
Bra018808.1-P Field mustard plastid 33.15 30.97
CDY51034 Canola plastid 32.58 30.53
CDY28095 Canola plastid 32.02 30.0
OQU76051 Sorghum golgi, plasma membrane, vacuole 39.61 29.07
VIT_03s0063g00770.t01 Wine grape plastid 33.43 28.61
EER97903 Sorghum cytosol 34.83 27.37
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 36.24 20.94
Protein Annotations
EnsemblPlants:OQU81663EnsemblPlantsGene:SORBI_3006G098400Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058PANTHER:PTHR23024
PANTHER:PTHR23024:SF180PFAM:PF07859ProteinID:OQU81663ProteinID:OQU81663.1SEG:segSUPFAM:SSF53474
UniParc:UPI000B8BAD2CUniProt:A0A1Z5RD24MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr6:+:46787909..46789072
Molecular Weight (calculated)
38015.3 Da
IEP (calculated)
6.149
GRAVY (calculated)
-0.158
Length
356 amino acids
Sequence
(BLAST)
001: MPAATVVVAG TNGDNEEVVH DFSPLLLVYR SGRLERPLIM PFDSPGHDAA TGVESKDVPL SPSTFVRLYL PPEARASSDG DVDDDGDKKK AGGKLPVVVY
101: FHGGGFVMGS AGSCVYHRFV NDLVAACPAL AVSVDYRLAP EHMLPAAYED SLAALKWVLS ATDTWLATHG DLGRVFLVGD SAGGNICHHL AMHPDVKGAG
201: AGAGAGLKGI VLIHPWFWGK EPIGGEQEHR RPRPRPRAKR ADDAEEGRGR KKHLWEFVCP GAVDGVDDPR MNPTAPGAPA LESLACEKVM VCVAEGDHLR
301: WRGKAYADAV ARGGGQPAAV DVLESEGVGH VFFLLDPEME EAKELLRRIA AFVRAK
Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)
001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA
Arabidopsis Description
CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.