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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G017510.2 Barley cytosol 70.91 73.12
TraesCS5A01G065200.1 Wheat cytosol, plastid 70.3 66.1
TraesCS5B01G072000.1 Wheat cytosol, mitochondrion 68.79 64.86
TraesCS5D01G076000.1 Wheat cytosol 68.79 64.67
GSMUA_Achr6P04230_001 Banana cytosol 35.76 50.43
GSMUA_Achr6P04360_001 Banana cytosol 44.24 49.83
Os08t0475000-00 Rice cytosol 50.61 48.69
GSMUA_Achr7P12950_001 Banana cytosol 47.58 48.61
KXG35780 Sorghum extracellular, vacuole 51.21 47.74
EES15127 Sorghum extracellular 53.33 46.93
KXG35781 Sorghum cytosol 43.94 46.33
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 49.7 46.2
GSMUA_Achr3P06860_001 Banana cytosol 34.24 46.12
OQU89622 Sorghum cytosol 43.64 45.28
EER99019 Sorghum cytosol 44.24 44.65
KXG19591 Sorghum cytosol 43.64 44.44
OQU80637 Sorghum plasma membrane 53.33 44.44
KXG35785 Sorghum extracellular, golgi, vacuole 50.3 44.03
VIT_03s0063g00750.t01 Wine grape cytosol 42.42 43.34
EER88163 Sorghum cytosol 41.52 43.22
KXG35761 Sorghum cytosol 42.42 42.94
KXG35782 Sorghum cytosol 43.03 42.14
KRH50255 Soybean cytosol 38.79 42.11
KRH50256 Soybean cytosol 40.3 41.82
KXG21709 Sorghum cytosol, mitochondrion, plastid 35.45 41.79
KRH71164 Soybean cytosol 38.48 41.78
KXG26418 Sorghum cytosol 41.82 41.57
VIT_03s0063g00730.t01 Wine grape cytosol 40.3 41.56
VIT_03s0063g00820.t01 Wine grape cytosol 37.58 41.2
EES16153 Sorghum cytosol 41.82 41.19
EER88069 Sorghum cytosol 41.52 41.14
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 37.27 41.0
EER89413 Sorghum cytosol 42.12 40.88
VIT_03s0063g00700.t01 Wine grape cytosol 40.0 40.87
KXG35760 Sorghum cytosol 40.0 40.74
VIT_03s0063g00740.t01 Wine grape cytosol 39.7 40.68
EER96865 Sorghum cytosol 40.3 40.67
KRH71161 Soybean cytosol 33.64 40.66
KXG25323 Sorghum cytosol 40.61 40.61
VIT_03s0063g00720.t01 Wine grape cytosol 39.7 40.56
PGSC0003DMT400066384 Potato cytosol 25.15 40.49
Solyc01g108570.2.1 Tomato cytosol, extracellular 37.88 40.32
KRH71162 Soybean cytosol, nucleus 40.61 40.24
OQU85176 Sorghum plastid 41.52 40.18
CDX77920 Canola cytosol 37.88 40.06
CDX68486 Canola cytosol 39.09 39.94
AT3G48700.1 Thale cress cytosol 39.7 39.82
CDX83045 Canola cytosol 39.09 39.81
KXG35783 Sorghum extracellular, vacuole 43.64 39.67
PGSC0003DMT400066392 Potato cytosol 37.58 39.62
Bra029913.1-P Field mustard cytosol 39.09 39.57
VIT_03s0063g00790.t01 Wine grape cytosol 36.06 39.53
OQU80639 Sorghum cytosol 40.0 39.52
CDY67024 Canola cytosol 38.48 39.32
Solyc01g108540.2.1 Tomato cytosol 36.67 39.16
PGSC0003DMT400091080 Potato cytosol 36.97 39.1
VIT_03s0063g00830.t01 Wine grape cytosol 35.76 39.07
Bra019558.1-P Field mustard cytosol 38.18 39.01
CDY37916 Canola cytosol 38.18 39.01
VIT_03s0063g00800.t01 Wine grape cytosol 35.45 39.0
Bra029912.1-P Field mustard cytosol 37.88 38.7
PGSC0003DMT400066389 Potato cytosol 34.24 38.7
VIT_03s0063g00810.t01 Wine grape cytosol 36.67 38.66
PGSC0003DMT400066386 Potato cytosol 36.36 38.46
OQU81663 Sorghum cytosol 41.21 38.2
AT3G48690.1 Thale cress cytosol 37.27 37.96
KRH50257 Soybean cytosol 37.27 37.85
Solyc01g108580.2.1 Tomato cytosol 35.76 37.82
PGSC0003DMT400066385 Potato cytosol 35.15 37.78
Solyc01g108530.2.1 Tomato cytosol 35.15 37.78
OQU89623 Sorghum mitochondrion 43.64 37.7
Bra025117.1-P Field mustard cytosol 34.24 37.17
Solyc01g108560.2.1 Tomato cytosol, plastid 33.64 36.88
Solyc10g050880.1.1 Tomato cytosol 34.85 36.86
AT1G19190.1 Thale cress cytosol 34.55 35.85
KRH71163 Soybean cytosol 32.73 35.76
CDX96674 Canola cytosol 35.15 35.69
AT2G03550.1 Thale cress cytosol 33.64 35.58
Bra025714.1-P Field mustard cytosol 25.45 35.29
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 33.33 34.92
PGSC0003DMT400066383 Potato cytosol 32.12 34.87
CDY41024 Canola peroxisome 33.94 34.67
Bra016519.1-P Field mustard cytosol 33.94 34.25
KRH71160 Soybean nucleus 40.61 34.1
CDY51033 Canola cytosol 33.03 34.06
PGSC0003DMT400088862 Potato cytosol 35.45 34.01
AT1G49660.1 Thale cress cytosol 32.42 33.54
CDY28098 Canola cytosol 32.73 33.54
Bra040667.1-P Field mustard cytosol 31.82 32.92
CDY28094 Canola cytosol 31.82 32.71
Bra018809.1-P Field mustard cytosol 31.21 32.59
OQU76051 Sorghum golgi, plasma membrane, vacuole 47.88 32.58
Bra018807.1-P Field mustard cytosol 32.12 32.52
AT1G49640.1 Thale cress cytosol 30.91 32.38
CDY20870 Canola cytosol 31.21 32.29
CDY29339 Canola cytosol 31.21 32.29
CDY51035 Canola cytosol 31.82 32.21
CDY02986 Canola cytosol 34.24 32.01
VIT_03s0063g00770.t01 Wine grape plastid 37.88 30.05
EER97903 Sorghum cytosol 41.21 30.02
AT1G49650.1 Thale cress mitochondrion 33.33 29.41
CDY16521 Canola mitochondrion 33.64 29.21
Bra014213.1-P Field mustard mitochondrion 33.33 28.95
Bra018808.1-P Field mustard plastid 33.03 28.61
CDY51034 Canola plastid 32.73 28.42
CDY32845 Canola mitochondrion 31.52 28.42
CDY28095 Canola plastid 32.42 28.16
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 42.42 22.73
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1UniProt:A0A1B6PI79InterPro:AB_hydrolaseInterPro:AB_hydrolase_3GO:GO:0003674
GO:GO:0003824GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0080019
InterPro:IPR029058EnsemblPlants:KXG25394ProteinID:KXG25394ProteinID:KXG25394.2InterPro:Lipase_GDXG_HIS_ASPFAM:PF07859
ScanProsite:PS01173PANTHER:PTHR23024PANTHER:PTHR23024:SF137EnsemblPlantsGene:SORBI_3007G157400SUPFAM:SSF53474UniParc:UPI000B8B9C3D
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:59169316..59170305
Molecular Weight (calculated)
36038.6 Da
IEP (calculated)
6.183
GRAVY (calculated)
-0.143
Length
330 amino acids
Sequence
(BLAST)
001: MDPDNEVDYD MSPYLIRYKS GRVHHLMGTG RVDAGTDAAT GVTSRDVVID VGTGLAARLH IPSDVLGTST KLPVLVYFHG GAFAVNSAFS TQYFRFLNAL
101: VSAARAVAVS VDFRLAPEHP LPAAYDDAWA ALGWAVATAS CARASSEQEP WAWLAEHGDP ARLFVAGDST GGNIAHNVAM RAGRRSGLPG GERIEGMVLL
201: HPYFCGKELV APSEGAEPRR RRSLETEERW WAFVCAERYG IDHPFINPVA MPATEWVSLG CRRAMVTVAE LDRMRDRGRR YVEALRASTW AGDEAVLYED
301: QGERHVFFLS SSDDSGKTKQ MIAAIASFMA
Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)
001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF
Arabidopsis Description
CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.