Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G017100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 HORVU0Hr1G017100.2 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G065200.1 Wheat cytosol, plastid 94.69 86.32
TraesCS5B01G072000.1 Wheat cytosol, mitochondrion 91.88 84.0
TraesCS5D01G076000.1 Wheat cytosol 91.56 83.48
KXG25394 Sorghum cytosol 73.12 70.91
Os08t0475000-00 Rice cytosol 62.19 58.02
GSMUA_Achr6P04230_001 Banana cytosol 40.0 54.7
GSMUA_Achr7P12950_001 Banana cytosol 55.0 54.49
HORVU0Hr1G005140.1 Barley extracellular 52.19 52.85
GSMUA_Achr6P04360_001 Banana cytosol 47.81 52.22
GSMUA_Achr3P06860_001 Banana cytosol 39.69 51.84
HORVU5Hr1G069040.1 Barley endoplasmic reticulum, vacuole 55.0 50.87
HORVU2Hr1G093140.1 Barley cytosol 49.69 49.07
HORVU5Hr1G069110.1 Barley cytosol 49.38 48.77
HORVU5Hr1G069140.1 Barley cytosol 49.38 48.77
HORVU5Hr1G069090.1 Barley endoplasmic reticulum, golgi 56.56 48.53
HORVU0Hr1G013180.1 Barley endoplasmic reticulum, golgi, mitochondrion 56.56 48.01
HORVU6Hr1G005900.1 Barley cytosol 48.12 47.83
HORVU2Hr1G110800.1 Barley cytosol 47.81 47.37
HORVU5Hr1G098770.1 Barley plasma membrane 52.81 46.69
VIT_03s0063g00750.t01 Wine grape cytosol 46.88 46.44
HORVU5Hr1G068140.1 Barley cytosol 45.62 45.06
KRH71164 Soybean cytosol 42.19 44.41
KRH50255 Soybean cytosol 41.88 44.08
VIT_03s0063g00730.t01 Wine grape cytosol 43.12 43.12
KRH50256 Soybean cytosol 42.81 43.08
VIT_03s0063g00830.t01 Wine grape cytosol 40.62 43.05
VIT_03s0063g00700.t01 Wine grape cytosol 43.44 43.03
VIT_03s0063g00720.t01 Wine grape cytosol 43.44 43.03
VIT_03s0063g00740.t01 Wine grape cytosol 43.12 42.86
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 39.69 42.33
CDX77920 Canola cytosol 41.25 42.31
VIT_03s0063g00820.t01 Wine grape cytosol 39.69 42.19
Solyc01g108540.2.1 Tomato cytosol 40.62 42.07
PGSC0003DMT400066384 Potato cytosol 26.88 41.95
AT3G48700.1 Thale cress cytosol 43.12 41.95
Bra025117.1-P Field mustard cytosol 39.69 41.78
KRH71162 Soybean cytosol, nucleus 43.44 41.74
PGSC0003DMT400066386 Potato cytosol 40.62 41.67
PGSC0003DMT400091080 Potato cytosol 40.62 41.67
VIT_03s0063g00800.t01 Wine grape cytosol 39.06 41.67
Solyc01g108570.2.1 Tomato cytosol, extracellular 40.31 41.61
VIT_03s0063g00790.t01 Wine grape cytosol 39.06 41.53
CDX68486 Canola cytosol 41.88 41.49
PGSC0003DMT400066389 Potato cytosol 37.81 41.44
KRH71161 Soybean cytosol 35.31 41.39
CDX83045 Canola cytosol 41.88 41.36
PGSC0003DMT400066392 Potato cytosol 40.31 41.21
Bra019558.1-P Field mustard cytosol 41.56 41.18
CDY37916 Canola cytosol 41.56 41.18
Bra029913.1-P Field mustard cytosol 41.88 41.1
CDY67024 Canola cytosol 41.25 40.87
Solyc01g108560.2.1 Tomato cytosol, plastid 38.44 40.86
AT3G48690.1 Thale cress cytosol 41.25 40.74
HORVU0Hr1G019700.1 Barley cytosol, mitochondrion 30.62 40.66
VIT_03s0063g00810.t01 Wine grape cytosol 39.69 40.58
HORVU0Hr1G013160.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 32.81 40.38
HORVU0Hr1G013170.1 Barley cytosol 41.56 40.3
HORVU5Hr1G068800.1 Barley plastid 47.81 40.26
Bra029912.1-P Field mustard cytosol 40.62 40.25
Solyc01g108580.2.1 Tomato cytosol 39.06 40.06
AT2G03550.1 Thale cress cytosol 38.44 39.42
Solyc10g050880.1.1 Tomato cytosol 38.44 39.42
PGSC0003DMT400066385 Potato cytosol 37.5 39.09
HORVU3Hr1G022640.1 Barley mitochondrion 44.38 38.9
CDY28098 Canola cytosol 39.06 38.82
Solyc01g108530.2.1 Tomato cytosol 37.19 38.76
PGSC0003DMT400066383 Potato cytosol 36.56 38.49
CDY51033 Canola cytosol 38.44 38.44
KRH71163 Soybean cytosol 35.94 38.08
AT1G19190.1 Thale cress cytosol 37.81 38.05
CDY28094 Canola cytosol 37.81 37.69
KRH50257 Soybean cytosol 38.12 37.54
Bra018807.1-P Field mustard cytosol 38.12 37.42
AT1G49660.1 Thale cress cytosol 37.19 37.3
CDY51035 Canola cytosol 37.81 37.12
Bra040667.1-P Field mustard cytosol 36.88 36.99
CDX96674 Canola cytosol 37.5 36.92
Bra018809.1-P Field mustard cytosol 36.25 36.71
CDY29339 Canola cytosol 36.56 36.68
HORVU5Hr1G093500.4 Barley plastid 42.5 36.66
PGSC0003DMT400088862 Potato cytosol 39.38 36.63
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 35.94 36.51
CDY20870 Canola cytosol 35.94 36.05
CDY02986 Canola cytosol 39.38 35.69
AT1G49640.1 Thale cress cytosol 35.0 35.56
Bra016519.1-P Field mustard cytosol 36.25 35.47
CDY41024 Canola peroxisome 35.0 34.67
KRH71160 Soybean nucleus 42.5 34.61
Bra025714.1-P Field mustard cytosol 25.62 34.45
HORVU0Hr1G013200.3 Barley plastid 39.69 33.96
HORVU5Hr1G068960.1 Barley cytosol 44.38 33.73
HORVU2Hr1G067270.2 Barley cytosol 44.06 33.49
HORVU2Hr1G002620.1 Barley cytosol 42.81 33.41
CDY16521 Canola mitochondrion 38.12 32.11
AT1G49650.1 Thale cress mitochondrion 37.5 32.09
Bra014213.1-P Field mustard mitochondrion 37.81 31.84
Bra018808.1-P Field mustard plastid 37.81 31.76
CDY51034 Canola plastid 37.19 31.32
CDY32845 Canola mitochondrion 35.62 31.15
CDY28095 Canola plastid 36.88 31.05
HORVU7Hr1G009170.1 Barley cytosol 40.94 31.04
VIT_03s0063g00770.t01 Wine grape plastid 40.0 30.77
HORVU0Hr1G004410.1 Barley cytosol 39.69 29.06
HORVU2Hr1G003300.1 Barley cytosol 42.81 28.72
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 46.25 24.03
Protein Annotations
EnsemblPlants:HORVU5Hr1G017510.2EnsemblPlantsGene:HORVU5Hr1G017510Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058InterPro:Lipase_GDXG_put_SER_AS
PANTHER:PTHR23024PANTHER:PTHR23024:SF137PFAM:PF07859ScanProsite:PS01174SEG:segSUPFAM:SSF53474
UniParc:UPI000B484CECUniProt:A0A287QHL2MapMan:35.1:::
Description
No Description!
Coordinates
chrchr5H:-:67680254..67681228
Molecular Weight (calculated)
34694.0 Da
IEP (calculated)
6.130
GRAVY (calculated)
-0.101
Length
320 amino acids
Sequence
(BLAST)
001: MDPDTEVDFD FSPFLVRYKS GRVHRLMGTS RVDAGTDAAT GVTCKDVVID ADAGLAARLY LPNDVPRSKK LPVLVYFHGG AFAVHSAFSV THHRFLNALV
101: ASAGAVAVSV DYRLAPEHPL PAAYDDAWAA LRWALASCAP AAGREPWLAE HGDAARLFVA GDSAGANIAH NVATRAGGGE DGLPRIEGLV LLHPYFRGKD
201: LVPSEGADPR FLQRVERSWG FICAGRYGTD HPFINPLAMP AVEWAALGCR RALVTVAELD TMRDRGRRYV EALRGSAWTG EEAVLYETGG EGHVYFLEES
301: GWGDKAEREM DAVVSFIRRS
Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)
001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF
Arabidopsis Description
CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.