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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G017100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 HORVU0Hr1G017100.2 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G013180.1 Barley endoplasmic reticulum, golgi, mitochondrion 100.0 98.94
TraesCS5D01G249500.1 Wheat endoplasmic reticulum, golgi 93.83 92.35
TraesCS5B01G240700.1 Wheat endoplasmic reticulum, golgi 93.03 92.29
TraesCS5A01G242900.1 Wheat extracellular, golgi 92.76 90.58
Os09t0462100-01 Rice plasma membrane 74.26 72.89
Zm00001d020741_P001 Maize golgi, mitochondrion, vacuole 70.24 69.13
KXG35785 Sorghum extracellular, golgi, vacuole 69.71 68.97
HORVU0Hr1G005140.1 Barley extracellular 50.13 59.18
HORVU5Hr1G017510.2 Barley cytosol 48.53 56.56
HORVU5Hr1G069040.1 Barley endoplasmic reticulum, vacuole 49.87 53.76
GSMUA_Achr6P04360_001 Banana cytosol 41.55 52.9
GSMUA_Achr7P12950_001 Banana cytosol 43.7 50.46
GSMUA_Achr6P04230_001 Banana cytosol 31.64 50.43
GSMUA_Achr3P06860_001 Banana cytosol 32.98 50.2
HORVU5Hr1G069110.1 Barley cytosol 41.02 47.22
HORVU5Hr1G069140.1 Barley cytosol 41.02 47.22
HORVU5Hr1G098770.1 Barley plasma membrane 45.31 46.69
HORVU6Hr1G005900.1 Barley cytosol 39.95 46.27
VIT_03s0063g00750.t01 Wine grape cytosol 39.95 46.13
HORVU2Hr1G093140.1 Barley cytosol 39.68 45.68
PGSC0003DMT400066384 Potato cytosol 24.66 44.88
HORVU2Hr1G110800.1 Barley cytosol 37.27 43.03
HORVU5Hr1G068140.1 Barley cytosol 37.0 42.59
KRH71164 Soybean cytosol 34.58 42.43
VIT_03s0063g00740.t01 Wine grape cytosol 36.46 42.24
VIT_03s0063g00730.t01 Wine grape cytosol 36.19 42.19
KRH50255 Soybean cytosol 34.32 42.11
CDX83045 Canola cytosol 36.19 41.67
Bra029913.1-P Field mustard cytosol 36.19 41.41
KRH71161 Soybean cytosol 30.29 41.39
CDX77920 Canola cytosol 34.58 41.35
PGSC0003DMT400091080 Potato cytosol 34.58 41.35
CDX68486 Canola cytosol 35.66 41.18
Solyc01g108570.2.1 Tomato cytosol, extracellular 34.05 40.97
KRH50256 Soybean cytosol 34.85 40.88
CDY37916 Canola cytosol 35.39 40.87
CDY67024 Canola cytosol 35.39 40.87
VIT_03s0063g00720.t01 Wine grape cytosol 35.39 40.87
PGSC0003DMT400066389 Potato cytosol 31.9 40.75
AT3G48690.1 Thale cress cytosol 35.39 40.74
Bra019558.1-P Field mustard cytosol 35.12 40.56
Bra029912.1-P Field mustard cytosol 35.12 40.56
VIT_03s0063g00700.t01 Wine grape cytosol 35.12 40.56
HORVU5Hr1G068800.1 Barley plastid 41.29 40.53
VIT_03s0063g00800.t01 Wine grape cytosol 32.44 40.33
PGSC0003DMT400066392 Potato cytosol 33.78 40.26
KRH71162 Soybean cytosol, nucleus 35.92 40.24
AT3G48700.1 Thale cress cytosol 35.39 40.12
Solyc01g108580.2.1 Tomato cytosol 33.51 40.06
Bra025714.1-P Field mustard cytosol 25.47 39.92
Solyc01g108560.2.1 Tomato cytosol, plastid 32.17 39.87
VIT_03s0063g00820.t01 Wine grape cytosol 32.17 39.87
Solyc01g108540.2.1 Tomato cytosol 32.98 39.81
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 31.9 39.67
Bra025117.1-P Field mustard cytosol 32.17 39.47
HORVU0Hr1G013170.1 Barley cytosol 34.58 39.09
PGSC0003DMT400066385 Potato cytosol 32.17 39.09
HORVU0Hr1G019700.1 Barley cytosol, mitochondrion 25.2 39.0
PGSC0003DMT400066386 Potato cytosol 32.44 38.78
Solyc01g108530.2.1 Tomato cytosol 31.9 38.76
CDY28094 Canola cytosol 33.24 38.63
Solyc10g050880.1.1 Tomato cytosol 31.9 38.14
AT1G19190.1 Thale cress cytosol 32.44 38.05
Bra018807.1-P Field mustard cytosol 33.24 38.04
CDY51035 Canola cytosol 32.98 37.73
HORVU0Hr1G013160.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 26.27 37.69
AT2G03550.1 Thale cress cytosol 31.37 37.5
PGSC0003DMT400088862 Potato cytosol 34.58 37.5
HORVU5Hr1G093500.4 Barley plastid 37.27 37.47
VIT_03s0063g00830.t01 Wine grape cytosol 30.29 37.42
VIT_03s0063g00810.t01 Wine grape cytosol 31.37 37.38
AT1G49660.1 Thale cress cytosol 31.9 37.3
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 31.37 37.14
HORVU3Hr1G022640.1 Barley mitochondrion 36.19 36.99
CDX96674 Canola cytosol 32.17 36.92
CDY41024 Canola peroxisome 31.9 36.84
Bra040667.1-P Field mustard cytosol 31.37 36.68
KRH50257 Soybean cytosol 31.9 36.62
CDY29339 Canola cytosol 31.1 36.36
CDY20870 Canola cytosol 30.83 36.05
CDY28098 Canola cytosol 31.1 36.02
Bra016519.1-P Field mustard cytosol 31.37 35.78
VIT_03s0063g00790.t01 Wine grape cytosol 28.69 35.55
PGSC0003DMT400066383 Potato cytosol 28.95 35.53
CDY51033 Canola cytosol 30.29 35.31
AT1G49640.1 Thale cress cytosol 29.76 35.24
CDY02986 Canola cytosol 33.24 35.13
KRH71160 Soybean nucleus 36.46 34.61
Bra018809.1-P Field mustard cytosol 28.95 34.18
KRH71163 Soybean cytosol 27.35 33.77
Bra018808.1-P Field mustard plastid 34.05 33.33
CDY16521 Canola mitochondrion 33.78 33.16
Bra014213.1-P Field mustard mitochondrion 33.51 32.89
CDY51034 Canola plastid 33.51 32.89
HORVU0Hr1G013200.3 Barley plastid 32.98 32.89
CDY28095 Canola plastid 33.24 32.63
AT1G49650.1 Thale cress mitochondrion 32.17 32.09
HORVU2Hr1G067270.2 Barley cytosol 35.92 31.83
HORVU5Hr1G068960.1 Barley cytosol 35.92 31.83
CDY32845 Canola mitochondrion 31.1 31.69
VIT_03s0063g00770.t01 Wine grape plastid 33.51 30.05
HORVU7Hr1G009170.1 Barley cytosol 32.71 28.91
HORVU2Hr1G002620.1 Barley cytosol 31.1 28.29
HORVU0Hr1G004410.1 Barley cytosol 32.71 27.92
HORVU2Hr1G003300.1 Barley cytosol 31.1 24.32
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 38.34 23.21
Protein Annotations
EnsemblPlants:HORVU5Hr1G069090.1EnsemblPlantsGene:HORVU5Hr1G069090Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058InterPro:Lipase_GDXG_put_SER_AS
PANTHER:PTHR23024PANTHER:PTHR23024:SF164PFAM:PF07859ScanProsite:PS01174SEG:segSUPFAM:SSF53474
TMHMM:TMhelixUniParc:UPI000B46E7AFUniProt:A0A287RNJ6MapMan:35.1::
Description
No Description!
Coordinates
chrchr5H:+:520524619..520526465
Molecular Weight (calculated)
39720.8 Da
IEP (calculated)
8.300
GRAVY (calculated)
0.086
Length
373 amino acids
Sequence
(BLAST)
001: MVSKIKRLPT LAKVALLLLV LLLLLTAILL LIFLVPRHRT APLPPAAPPG PADNCSDRAV AFDFSPFLVQ YKGGCVHRMD GTARVPAGVD AATGVSSKDV
101: VIDHATGLGA RMYLPAGAGE GKKKEKDLPV VVFFHGGAFV IMTPFEPKYH DYLNALVAKA RVVAVSVDYR LAPEHPLPAA YDDSWAALNW AARNADAGPE
201: PWLRDRGNLS RLFLAGDSAG ANIAHNMAMR AGSGLEGGAA ILGVLLLDPY FWGKRPVGAE TTDPATRRRY EATWSFVCAG RYGIDDPLIN PLAAPAAELR
301: GLACARMAVT TSGLDDFEAR GEAYAAALNG SGWGGEVVRY ETAGERHVYF LDQPASPKSA RELAFAAAYL SRG
Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)
001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA
Arabidopsis Description
CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.