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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G017100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 HORVU0Hr1G017100.2 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G002620.1 Barley cytosol 53.55 57.07
HORVU7Hr1G009170.1 Barley cytosol 53.55 55.45
EER97903 Sorghum cytosol 57.21 55.19
Os07t0526600-01 Rice extracellular 53.55 50.87
HORVU2Hr1G003300.1 Barley cytosol 52.17 47.8
GSMUA_Achr6P04360_001 Banana cytosol 29.75 44.37
VIT_03s0063g00830.t01 Wine grape cytosol 29.98 43.38
VIT_03s0063g00800.t01 Wine grape cytosol 29.52 43.0
GSMUA_Achr3P06860_001 Banana cytosol 24.03 42.86
GSMUA_Achr6P04230_001 Banana cytosol 22.88 42.73
VIT_03s0063g00700.t01 Wine grape cytosol 30.89 41.8
VIT_03s0063g00720.t01 Wine grape cytosol 30.89 41.8
VIT_03s0063g00790.t01 Wine grape cytosol 28.38 41.2
HORVU2Hr1G110800.1 Barley cytosol 30.43 41.18
PGSC0003DMT400066384 Potato cytosol 19.22 40.98
VIT_03s0063g00730.t01 Wine grape cytosol 29.98 40.94
VIT_03s0063g00750.t01 Wine grape cytosol 30.21 40.87
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 27.69 40.33
VIT_03s0063g00810.t01 Wine grape cytosol 28.83 40.26
PGSC0003DMT400066385 Potato cytosol 28.15 40.07
HORVU6Hr1G005900.1 Barley cytosol 29.52 40.06
PGSC0003DMT400066392 Potato cytosol 28.6 39.94
PGSC0003DMT400066389 Potato cytosol 26.54 39.73
HORVU5Hr1G017510.2 Barley cytosol 29.06 39.69
VIT_03s0063g00740.t01 Wine grape cytosol 29.06 39.44
PGSC0003DMT400066386 Potato cytosol 28.15 39.42
PGSC0003DMT400091080 Potato cytosol 28.15 39.42
Solyc01g108530.2.1 Tomato cytosol 27.69 39.41
Solyc01g108570.2.1 Tomato cytosol, extracellular 27.92 39.35
Solyc01g108560.2.1 Tomato cytosol, plastid 27.0 39.2
GSMUA_Achr7P12950_001 Banana cytosol 28.83 39.01
HORVU5Hr1G068140.1 Barley cytosol 28.83 38.89
VIT_03s0063g00820.t01 Wine grape cytosol 26.77 38.87
Solyc01g108540.2.1 Tomato cytosol 27.46 38.84
Solyc01g108580.2.1 Tomato cytosol 27.69 38.78
Bra025714.1-P Field mustard cytosol 21.05 38.66
CDY28094 Canola cytosol 28.15 38.32
HORVU0Hr1G005140.1 Barley extracellular 27.69 38.29
AT1G49660.1 Thale cress cytosol 27.92 38.24
KRH50255 Soybean cytosol 26.54 38.16
CDX77920 Canola cytosol 27.23 38.14
KRH71163 Soybean cytosol 26.32 38.08
KRH50256 Soybean cytosol 27.69 38.05
Solyc10g050880.1.1 Tomato cytosol 27.0 37.82
CDY51033 Canola cytosol 27.69 37.81
Bra019558.1-P Field mustard cytosol 27.92 37.77
Bra018807.1-P Field mustard cytosol 28.15 37.73
CDY28098 Canola cytosol 27.69 37.58
KRH71162 Soybean cytosol, nucleus 28.6 37.54
Bra025117.1-P Field mustard cytosol 26.09 37.5
KRH71164 Soybean cytosol 26.09 37.5
CDY37916 Canola cytosol 27.69 37.46
CDY41024 Canola peroxisome 27.69 37.46
Bra040667.1-P Field mustard cytosol 27.23 37.3
CDY20870 Canola cytosol 27.23 37.3
CDY29339 Canola cytosol 27.23 37.3
PGSC0003DMT400066383 Potato cytosol 25.86 37.17
CDX68486 Canola cytosol 27.46 37.15
CDY51035 Canola cytosol 27.69 37.12
CDX83045 Canola cytosol 27.46 37.04
HORVU5Hr1G069110.1 Barley cytosol 27.46 37.04
HORVU5Hr1G069140.1 Barley cytosol 27.46 37.04
Bra029913.1-P Field mustard cytosol 27.46 36.81
AT3G48690.1 Thale cress cytosol 27.23 36.73
HORVU2Hr1G093140.1 Barley cytosol 27.0 36.42
Bra029912.1-P Field mustard cytosol 26.77 36.22
AT3G48700.1 Thale cress cytosol 27.23 36.17
Bra018809.1-P Field mustard cytosol 26.09 36.08
CDY67024 Canola cytosol 26.54 35.91
AT1G49640.1 Thale cress cytosol 25.86 35.87
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 25.86 35.87
HORVU0Hr1G019700.1 Barley cytosol, mitochondrion 19.45 35.27
AT2G03550.1 Thale cress cytosol 25.17 35.26
PGSC0003DMT400088862 Potato cytosol 27.69 35.17
KRH71161 Soybean cytosol 21.97 35.16
AT1G19190.1 Thale cress cytosol 25.4 34.91
Bra016519.1-P Field mustard cytosol 25.86 34.56
CDX96674 Canola cytosol 25.63 34.46
CDY16521 Canola mitochondrion 29.75 34.21
KRH50257 Soybean cytosol 25.4 34.15
Bra018808.1-P Field mustard plastid 29.75 34.12
Bra014213.1-P Field mustard mitochondrion 29.52 33.95
HORVU5Hr1G069040.1 Barley endoplasmic reticulum, vacuole 26.77 33.81
CDY51034 Canola plastid 29.29 33.68
CDY32845 Canola mitochondrion 27.92 33.33
CDY28095 Canola plastid 28.83 33.16
AT1G49650.1 Thale cress mitochondrion 28.38 33.16
HORVU3Hr1G022640.1 Barley mitochondrion 27.69 33.15
HORVU5Hr1G068800.1 Barley plastid 28.6 32.89
HORVU5Hr1G069090.1 Barley endoplasmic reticulum, golgi 27.92 32.71
HORVU0Hr1G013180.1 Barley endoplasmic reticulum, golgi, mitochondrion 27.92 32.36
CDY02986 Canola cytosol 25.63 31.73
KRH71160 Soybean nucleus 28.15 31.3
HORVU5Hr1G093500.4 Barley plastid 26.54 31.27
VIT_03s0063g00770.t01 Wine grape plastid 29.29 30.77
HORVU5Hr1G098770.1 Barley plasma membrane 25.4 30.66
HORVU0Hr1G013170.1 Barley cytosol 22.65 30.0
HORVU2Hr1G067270.2 Barley cytosol 28.15 29.22
HORVU5Hr1G068960.1 Barley cytosol 28.15 29.22
HORVU0Hr1G013160.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 16.25 27.31
HORVU0Hr1G013200.3 Barley plastid 23.34 27.27
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 28.38 20.13
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1InterPro:AB_hydrolaseInterPro:AB_hydrolase_3GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:HORVU0Hr1G004410EnsemblPlants:HORVU0Hr1G004410.1InterPro:IPR029058
InterPro:Lipase_GDXG_put_SER_ASUniProt:M0VB03PFAM:PF07859ScanProsite:PS01174PANTHER:PTHR23024PANTHER:PTHR23024:SF225
SUPFAM:SSF53474UniParc:UPI0002952D30::::
Description
No Description!
Coordinates
chrchrUn:+:25438321..25440141
Molecular Weight (calculated)
47822.9 Da
IEP (calculated)
8.895
GRAVY (calculated)
-0.126
Length
437 amino acids
Sequence
(BLAST)
001: MHAKTSCVAY KNEVADIAVD LHPFIRKYND GHIVRFLSSS FVPASEDLAA GSASRGVSTR DVVVDPGTGV SARLFLPSRA AATGRRLPLV IYIHGGAFCT
101: ESTFCRTYHR YVTSLAANAG ALVVSVEYRL APEHPIPTAY EDSWTALRWV ASLSDPWLAD YADPGRVFLA GDSAGGNIAY HMAVRASRDA SIMDVEGLVI
201: VQPFFWGTER LPSETNRPED AVVLPARRVD WLWPLLTAGK ASNDDPRLNP PDEEIASLAC RRVLVAVAER DTLRDRGCQL AARMRHSPLI GDNVTLIESE
301: GEDHGFHLYS PLRATSRSLM KGIVQFINQG AHSPPTTMVF PELNRRPMLL AHEAEVVSST VGAQTLTSVL PRSFNDIFAY PKVGRAPRST TRSSLNPGQV
401: KASKISIGFL YSRQRPDKAN RGPFSVAFRG HSLVNIF
Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)
001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA
Arabidopsis Description
CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.