Factsheet for HORVU5Hr1G098770.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	mitochondrion
YLoc:	endoplasmic reticulum

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G017100.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	HORVU0Hr1G017100.2	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G412100.1	Wheat	endoplasmic reticulum	80.39	86.87
TraesCS5D01G417100.1	Wheat	endoplasmic reticulum	80.39	86.35
TraesCS5A01G407200.1	Wheat	plastid	85.64	72.77
Os08t0475100-01	Rice	extracellular	65.75	71.47
EES14010	Sorghum	endoplasmic reticulum, extracellular, vacuole	68.78	70.14
Zm00001d031801_P001	Maize	endoplasmic reticulum	66.85	68.17
HORVU5Hr1G069040.1	Barley	endoplasmic reticulum, vacuole	53.59	56.07
HORVU5Hr1G017510.2	Barley	cytosol	46.69	52.81
HORVU0Hr1G005140.1	Barley	extracellular	41.99	48.1
GSMUA_Achr6P04360_001	Banana	cytosol	37.57	46.42
HORVU5Hr1G069090.1	Barley	endoplasmic reticulum, golgi	46.69	45.31
GSMUA_Achr3P06860_001	Banana	cytosol	30.66	45.31
GSMUA_Achr6P04230_001	Banana	cytosol	29.01	44.87
HORVU0Hr1G013180.1	Barley	endoplasmic reticulum, golgi, mitochondrion	46.69	44.83
GSMUA_Achr7P12950_001	Banana	cytosol	38.12	42.72
HORVU5Hr1G069110.1	Barley	cytosol	38.12	42.59
HORVU5Hr1G069140.1	Barley	cytosol	38.12	42.59
HORVU6Hr1G005900.1	Barley	cytosol	36.74	41.3
VIT_03s0063g00800.t01	Wine grape	cytosol	33.7	40.67
HORVU2Hr1G110800.1	Barley	cytosol	36.19	40.56
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	33.15	40.0
VIT_03s0063g00810.t01	Wine grape	cytosol	34.53	39.94
HORVU2Hr1G093140.1	Barley	cytosol	35.64	39.81
PGSC0003DMT400066384	Potato	cytosol	22.38	39.51
VIT_03s0063g00730.t01	Wine grape	cytosol	34.81	39.38
VIT_03s0063g00720.t01	Wine grape	cytosol	35.08	39.32
VIT_03s0063g00820.t01	Wine grape	cytosol	32.6	39.2
KRH50255	Soybean	cytosol	32.87	39.14
VIT_03s0063g00700.t01	Wine grape	cytosol	34.81	39.01
VIT_03s0063g00750.t01	Wine grape	cytosol	34.25	38.39
Solyc01g108570.2.1	Tomato	cytosol, extracellular	32.87	38.39
HORVU5Hr1G068140.1	Barley	cytosol	34.25	38.27
KRH71164	Soybean	cytosol	31.77	37.83
CDX77920	Canola	cytosol	32.6	37.82
CDY37916	Canola	cytosol	33.7	37.77
PGSC0003DMT400066389	Potato	cytosol	30.39	37.67
VIT_03s0063g00790.t01	Wine grape	cytosol	31.22	37.54
Bra019558.1-P	Field mustard	cytosol	33.43	37.46
Solyc01g108530.2.1	Tomato	cytosol	31.77	37.46
KRH50256	Soybean	cytosol	32.87	37.42
PGSC0003DMT400066392	Potato	cytosol	32.32	37.38
VIT_03s0063g00740.t01	Wine grape	cytosol	33.15	37.27
Solyc01g108560.2.1	Tomato	cytosol, plastid	30.94	37.21
PGSC0003DMT400066385	Potato	cytosol	31.49	37.13
HORVU5Hr1G068800.1	Barley	plastid	38.95	37.11
Solyc01g108540.2.1	Tomato	cytosol	31.49	36.89
PGSC0003DMT400066386	Potato	cytosol	31.49	36.54
PGSC0003DMT400091080	Potato	cytosol	31.49	36.54
KRH71163	Soybean	cytosol	30.39	36.42
CDX83045	Canola	cytosol	32.6	36.42
KRH71161	Soybean	cytosol	27.35	36.26
Solyc01g108580.2.1	Tomato	cytosol	31.22	36.22
Bra029913.1-P	Field mustard	cytosol	32.6	36.2
CDY28094	Canola	cytosol	32.04	36.14
HORVU0Hr1G013170.1	Barley	cytosol	32.87	36.06
CDX68486	Canola	cytosol	32.04	35.91
Bra025117.1-P	Field mustard	cytosol	30.11	35.86
VIT_03s0063g00830.t01	Wine grape	cytosol	29.83	35.76
AT3G48690.1	Thale cress	cytosol	31.77	35.49
CDY28098	Canola	cytosol	31.49	35.4
AT3G48700.1	Thale cress	cytosol	32.04	35.26
AT2G03550.1	Thale cress	cytosol	30.39	35.26
KRH71162	Soybean	cytosol, nucleus	32.32	35.14
CDY67024	Canola	cytosol	31.22	34.98
Bra025714.1-P	Field mustard	cytosol	22.93	34.87
Bra029912.1-P	Field mustard	cytosol	30.94	34.67
Bra018807.1-P	Field mustard	cytosol	31.22	34.66
Solyc10g050880.1.1	Tomato	cytosol	29.83	34.62
Bra018809.1-P	Field mustard	cytosol	30.11	34.49
AT1G49660.1	Thale cress	cytosol	30.39	34.48
CDY51033	Canola	cytosol	30.39	34.38
CDY41024	Canola	peroxisome	30.66	34.37
CDY51035	Canola	cytosol	30.94	34.36
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	29.83	34.29
AT1G19190.1	Thale cress	cytosol	30.11	34.28
PGSC0003DMT400066383	Potato	cytosol	28.45	33.88
PGSC0003DMT400088862	Potato	cytosol	32.04	33.72
AT1G49640.1	Thale cress	cytosol	29.28	33.65
Bra040667.1-P	Field mustard	cytosol	29.56	33.54
HORVU0Hr1G013160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	23.76	33.08
CDX96674	Canola	cytosol	29.56	32.92
CDY20870	Canola	cytosol	29.01	32.92
CDY29339	Canola	cytosol	29.01	32.92
Bra016519.1-P	Field mustard	cytosol	29.56	32.72
HORVU5Hr1G093500.4	Barley	plastid	32.87	32.08
HORVU0Hr1G019700.1	Barley	cytosol, mitochondrion	20.99	31.54
HORVU3Hr1G022640.1	Barley	mitochondrion	31.49	31.23
CDY02986	Canola	cytosol	29.83	30.59
KRH50257	Soybean	cytosol	27.35	30.46
VIT_03s0063g00770.t01	Wine grape	plastid	34.81	30.29
CDY16521	Canola	mitochondrion	31.49	30.0
AT1G49650.1	Thale cress	mitochondrion	30.94	29.95
Bra014213.1-P	Field mustard	mitochondrion	31.22	29.74
Bra018808.1-P	Field mustard	plastid	31.22	29.66
CDY28095	Canola	plastid	30.94	29.47
HORVU2Hr1G067270.2	Barley	cytosol	33.98	29.22
HORVU5Hr1G068960.1	Barley	cytosol	33.98	29.22
CDY51034	Canola	plastid	30.66	29.21
CDY32845	Canola	mitochondrion	29.01	28.69
HORVU0Hr1G013200.3	Barley	plastid	29.56	28.61
HORVU2Hr1G002620.1	Barley	cytosol	32.04	28.29
KRH71160	Soybean	nucleus	30.11	27.74
HORVU7Hr1G009170.1	Barley	cytosol	32.04	27.49
HORVU0Hr1G004410.1	Barley	cytosol	30.66	25.4
HORVU2Hr1G003300.1	Barley	cytosol	32.87	24.95
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	33.43	19.64

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A287SGR4	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:HORVU5Hr1G098770	EnsemblPlants:HORVU5Hr1G098770.1
InterPro:IPR029058	PFAM:PF07859	PANTHER:PTHR23024	PANTHER:PTHR23024:SF165	SUPFAM:SSF53474	SignalP:SignalP-noTM
UniParc:UPI000B47F109	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:608698074..608700179

Molecular Weight (calculated)

38269.5 Da

IEP (calculated)

9.235

GRAVY (calculated)

-0.008

Length

362 amino acids

Sequence
(BLAST)

001: AAQCGSLAAA RTVPSLRAPC SEPAIMAALA LLLLLALGEG ASALRGRADG EAVKFDFTPF LIQYESGRVQ RFMGTSVVPP SVDARTGVAS ADVVVDQGTG
101: LAVRLYRPST RGRHGRLPVL LYFHGGAFVV ESAFGPVYHN YLNALAARAG VIAVSVNYRL APEHTLPAAY DDSWTALQWV LSNASRGSGS GSSWLSKYGD
201: MSRLFVGGDS AGGNIAHNLA MRAGQQGGQD AGDIRPPIKG VALLDPYFLG GHASAWAERA WGFICAGRYG TEHPYVDPMA LPAEAWRRLG AARVLVTRSG
301: QDRLGPWQGA YVDALRGSGW GGKARLYETP GEGHCYFLNN LQSPKAAMHM ATVAAFVNHS PS

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.