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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, secretory
Any Predictor:cytosol, mitochondrion, plastid, secretory
iPSORT:plastid
MultiLoc:cytosol
Predotar:mitochondrion
TargetP:secretory
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G017100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 HORVU0Hr1G017100.2 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G240800.1 Wheat extracellular, golgi 77.31 54.62
TraesCS5A01G242800.1 Wheat extracellular, plasma membrane 77.69 54.59
TraesCS5D01G249400.1 Wheat endoplasmic reticulum, plasma membrane 78.08 54.28
Os09t0461900-01 Rice cytosol, plasma membrane 63.46 51.4
HORVU2Hr1G093140.1 Barley cytosol 63.85 51.23
HORVU0Hr1G013200.3 Barley plastid 71.54 49.73
KXG35783 Sorghum extracellular, vacuole 63.08 45.18
Zm00001d005909_P001 Maize plasma membrane 62.69 45.15
PGSC0003DMT400066384 Potato cytosol 27.31 34.63
HORVU0Hr1G019700.1 Barley cytosol, mitochondrion 31.15 33.61
HORVU5Hr1G017510.2 Barley cytosol 40.38 32.81
GSMUA_Achr7P12950_001 Banana cytosol 37.69 30.34
Bra025714.1-P Field mustard cytosol 27.31 29.83
HORVU5Hr1G069040.1 Barley endoplasmic reticulum, vacuole 39.62 29.77
GSMUA_Achr6P04230_001 Banana cytosol 26.15 29.06
GSMUA_Achr6P04360_001 Banana cytosol 32.31 28.67
HORVU6Hr1G005900.1 Barley cytosol 35.0 28.26
VIT_03s0063g00750.t01 Wine grape cytosol 35.0 28.17
Solyc01g108560.2.1 Tomato cytosol, plastid 32.31 27.91
GSMUA_Achr3P06860_001 Banana cytosol 26.15 27.76
HORVU0Hr1G005140.1 Barley extracellular 33.46 27.53
HORVU5Hr1G069110.1 Barley cytosol 34.23 27.47
HORVU5Hr1G069140.1 Barley cytosol 34.23 27.47
KRH50256 Soybean cytosol 33.46 27.36
HORVU2Hr1G110800.1 Barley cytosol 33.85 27.24
PGSC0003DMT400066386 Potato cytosol 32.69 27.24
PGSC0003DMT400066392 Potato cytosol 32.69 27.16
VIT_03s0063g00740.t01 Wine grape cytosol 33.46 27.02
VIT_03s0063g00700.t01 Wine grape cytosol 33.46 26.93
VIT_03s0063g00720.t01 Wine grape cytosol 33.46 26.93
AT2G03550.1 Thale cress cytosol 32.31 26.92
Solyc01g108540.2.1 Tomato cytosol 31.92 26.86
Bra029912.1-P Field mustard cytosol 33.08 26.63
Solyc01g108570.2.1 Tomato cytosol, extracellular 31.54 26.45
PGSC0003DMT400066389 Potato cytosol 29.62 26.37
HORVU5Hr1G069090.1 Barley endoplasmic reticulum, golgi 37.69 26.27
HORVU0Hr1G013180.1 Barley endoplasmic reticulum, golgi, mitochondrion 37.69 25.99
Bra025117.1-P Field mustard cytosol 30.38 25.99
VIT_03s0063g00730.t01 Wine grape cytosol 31.92 25.94
AT3G48690.1 Thale cress cytosol 32.31 25.93
HORVU3Hr1G022640.1 Barley mitochondrion 36.15 25.75
CDY67024 Canola cytosol 31.92 25.7
CDX77920 Canola cytosol 30.77 25.64
PGSC0003DMT400091080 Potato cytosol 30.77 25.64
Solyc01g108580.2.1 Tomato cytosol 30.77 25.64
PGSC0003DMT400066385 Potato cytosol 30.0 25.41
Solyc01g108530.2.1 Tomato cytosol 30.0 25.41
KRH71164 Soybean cytosol 29.62 25.33
AT3G48700.1 Thale cress cytosol 31.92 25.23
CDY37916 Canola cytosol 31.15 25.08
VIT_03s0063g00800.t01 Wine grape cytosol 28.85 25.0
KRH71162 Soybean cytosol, nucleus 31.92 24.92
KRH71161 Soybean cytosol 26.15 24.91
KRH71163 Soybean cytosol 28.85 24.83
Bra016519.1-P Field mustard cytosol 31.15 24.77
Bra019558.1-P Field mustard cytosol 30.77 24.77
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 28.46 24.67
CDX96674 Canola cytosol 30.77 24.62
CDY28094 Canola cytosol 30.38 24.61
CDX68486 Canola cytosol 30.38 24.46
CDX83045 Canola cytosol 30.38 24.38
HORVU5Hr1G068140.1 Barley cytosol 30.38 24.38
Bra029913.1-P Field mustard cytosol 30.38 24.23
VIT_03s0063g00830.t01 Wine grape cytosol 28.08 24.17
CDY51033 Canola cytosol 29.62 24.06
KRH50255 Soybean cytosol 28.08 24.01
Bra018807.1-P Field mustard cytosol 30.0 23.93
CDY51035 Canola cytosol 30.0 23.93
VIT_03s0063g00820.t01 Wine grape cytosol 27.69 23.92
AT1G19190.1 Thale cress cytosol 29.23 23.9
CDY41024 Canola peroxisome 29.62 23.84
Bra040667.1-P Field mustard cytosol 29.23 23.82
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 28.85 23.81
HORVU5Hr1G098770.1 Barley plasma membrane 33.08 23.76
VIT_03s0063g00810.t01 Wine grape cytosol 28.46 23.64
AT1G49660.1 Thale cress cytosol 28.85 23.51
CDY29339 Canola cytosol 28.85 23.51
HORVU0Hr1G013170.1 Barley cytosol 29.62 23.33
CDY28098 Canola cytosol 28.85 23.29
PGSC0003DMT400088862 Potato cytosol 30.77 23.26
CDY20870 Canola cytosol 28.46 23.2
Bra018809.1-P Field mustard cytosol 28.08 23.1
HORVU5Hr1G093500.4 Barley plastid 32.69 22.91
HORVU5Hr1G068800.1 Barley plastid 33.08 22.63
VIT_03s0063g00790.t01 Wine grape cytosol 26.15 22.59
CDY02986 Canola cytosol 30.38 22.38
KRH50257 Soybean cytosol 27.69 22.15
Solyc10g050880.1.1 Tomato cytosol 26.54 22.12
KRH71160 Soybean nucleus 32.31 21.37
CDY28095 Canola plastid 30.38 20.79
Bra018808.1-P Field mustard plastid 30.38 20.73
CDY51034 Canola plastid 30.0 20.53
CDY16521 Canola mitochondrion 29.62 20.26
Bra014213.1-P Field mustard mitochondrion 29.23 20.0
CDY32845 Canola mitochondrion 28.08 19.95
AT1G49640.1 Thale cress cytosol 23.85 19.68
PGSC0003DMT400066383 Potato cytosol 22.69 19.41
AT1G49650.1 Thale cress mitochondrion 27.69 19.25
VIT_03s0063g00770.t01 Wine grape plastid 30.38 18.99
HORVU2Hr1G067270.2 Barley cytosol 30.0 18.53
HORVU5Hr1G068960.1 Barley cytosol 30.0 18.53
HORVU2Hr1G002620.1 Barley cytosol 27.69 17.56
HORVU0Hr1G004410.1 Barley cytosol 27.31 16.25
HORVU7Hr1G009170.1 Barley cytosol 26.15 16.11
HORVU2Hr1G003300.1 Barley cytosol 26.15 14.26
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 29.23 12.34
Protein Annotations
EnsemblPlants:HORVU0Hr1G013160.1EnsemblPlantsGene:HORVU0Hr1G013160Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058ncoils:Coil
PANTHER:PTHR23024PANTHER:PTHR23024:SF171PFAM:PF07859SEG:segSUPFAM:SSF53474UniParc:UPI000B485FC5
UniProt:A0A287E0R1MapMan:35.1::::
Description
No Description!
Coordinates
chrchrUn:+:75762807..75763722
Molecular Weight (calculated)
24449.0 Da
IEP (calculated)
6.613
GRAVY (calculated)
-0.148
Length
260 amino acids
Sequence
(BLAST)
001: MCICYKSKIL KVCTSSRGVS LNLXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXAPEH PIPAAYEDAF AALKAVVGAC RPGGAEPWLA AHGDASRVVL
101: AGDSAGANMA HATAIRLGKE GIDGYGDKVS GVALLNPYFW GKQPVGGEPT DAGYRGGFER AWQVICSGKF GPDHPYINPA TAPEEWRRLG SGRVLVTTAE
201: HCWFVERARA YAEGIKACGW DGELQFHETK GEAHVYFLPK YDSDTAVEEL AMVADFVRRC
Best Arabidopsis Sequence Match ( AT2G03550.1 )
(BLAST)
001: MDSVIAFDRS PMFRVYKSGR IERLLGETTV PPSLTPQNGV VSKDIIHSPE KNLSLRIYLP EKVTVKKLPI LIYFHGGGFI IETAFSPPYH TFLTSAVAAA
101: NCLAISVNYR RAPEFPVPIP YEDSWDSLKW VLTHITGTGP ETWINKHGDF GKVFLAGDSA GGNISHHLTM RAKKEKLCDS LISGIILIHP YFWSKTPIDE
201: FEVRDVGKTK GVEGSWRVAS PNSKQGVDDP WLNVVGSDPS GLGCGRVLVM VAGDDLFVRQ GWCYAEKLKK SGWEGEVEVM ETKNEGHVFH LKNPNSDNAR
301: QVVKKLEEFI NK
Arabidopsis Description
CXE7Probable carboxylesterase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ91]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.