Factsheet for Zm00001d020741_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, mitochondrion, vacuole

Predictor Summary:

endoplasmic reticulum 3
plasma membrane 3
vacuole 4
golgi 4
extracellular 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d052230_P001
Zm00001d053989_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	Zm00001d053989_P003	AT4G10930.1	21798944
AT3G48690.1	Zm00001d052230_P001	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35785	Sorghum	extracellular, golgi, vacuole	90.77	91.25
Os09t0462100-01	Rice	plasma membrane	77.57	77.37
HORVU5Hr1G069090.1	Barley	endoplasmic reticulum, golgi	69.13	70.24
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	69.39	69.95
HORVU0Hr1G013180.1	Barley	endoplasmic reticulum, golgi, mitochondrion	69.13	69.5
TraesCS5D01G249500.1	Wheat	endoplasmic reticulum, golgi	69.13	69.13
TraesCS5A01G242900.1	Wheat	extracellular, golgi	67.81	67.28
Zm00001d020736_P001	Maize	endoplasmic reticulum, vacuole	52.24	57.23
Zm00001d005905_P001	Maize	endoplasmic reticulum, golgi	52.77	56.82
GSMUA_Achr6P04360_001	Banana	cytosol	41.42	53.58
Zm00001d050479_P001	Maize	extracellular, plasma membrane, vacuole	52.24	52.24
GSMUA_Achr7P12950_001	Banana	cytosol	44.06	51.7
GSMUA_Achr6P04230_001	Banana	cytosol	30.61	49.57
GSMUA_Achr3P06860_001	Banana	cytosol	31.13	48.16
Zm00001d031801_P001	Maize	endoplasmic reticulum	44.59	47.61
Zm00001d005910_P001	Maize	cytosol	39.58	45.87
Zm00001d044921_P001	Maize	cytosol, extracellular	39.84	45.76
Zm00001d020707_P001	Maize	cytosol, extracellular	33.25	44.06
Zm00001d020732_P001	Maize	plastid	35.62	43.55
Zm00001d037288_P001	Maize	cytosol, extracellular	35.62	43.41
PGSC0003DMT400091080	Potato	cytosol	35.36	42.95
VIT_03s0063g00750.t01	Wine grape	cytosol	36.41	42.72
Zm00001d005909_P001	Maize	plasma membrane	40.63	42.66
CDX77920	Canola	cytosol	35.09	42.63
Solyc01g108570.2.1	Tomato	cytosol, extracellular	34.83	42.58
Solyc01g108560.2.1	Tomato	cytosol, plastid	33.51	42.19
CDY37916	Canola	cytosol	35.88	42.11
Bra019558.1-P	Field mustard	cytosol	35.62	41.8
Solyc01g108540.2.1	Tomato	cytosol	34.04	41.75
Zm00001d031805_P001	Maize	cytosol	29.82	41.7
Zm00001d037180_P001	Maize	cytosol, extracellular	35.62	41.54
PGSC0003DMT400066392	Potato	cytosol	34.3	41.53
Bra025117.1-P	Field mustard	cytosol	33.25	41.45
VIT_03s0063g00800.t01	Wine grape	cytosol	32.72	41.33
CDX68486	Canola	cytosol	35.09	41.18
Bra029913.1-P	Field mustard	cytosol	35.36	41.1
PGSC0003DMT400066389	Potato	cytosol	31.66	41.1
CDX83045	Canola	cytosol	35.09	41.05
PGSC0003DMT400066386	Potato	cytosol	33.77	41.03
Solyc01g108580.2.1	Tomato	cytosol	33.77	41.03
Zm00001d020737_P001	Maize	extracellular	34.04	40.95
KRH50255	Soybean	cytosol	32.72	40.79
KRH71164	Soybean	cytosol	32.72	40.79
AT3G48690.1	Thale cress	cytosol	34.83	40.74
Zm00001d050493_P001	Maize	cytosol, extracellular	35.09	40.67
KRH50256	Soybean	cytosol	34.04	40.57
VIT_03s0063g00820.t01	Wine grape	cytosol	32.19	40.53
PGSC0003DMT400066384	Potato	cytosol	21.9	40.49
KRH71162	Soybean	cytosol, nucleus	35.36	40.24
KRH71161	Soybean	cytosol	28.76	39.93
Zm00001d020740_P001	Maize	cytosol	34.56	39.7
VIT_03s0063g00730.t01	Wine grape	cytosol	33.51	39.69
Bra029912.1-P	Field mustard	cytosol	33.77	39.63
AT3G48700.1	Thale cress	cytosol	34.3	39.51
CDY67024	Canola	cytosol	33.51	39.32
Zm00001d050837_P001	Maize	cytosol	34.3	39.16
VIT_03s0063g00740.t01	Wine grape	cytosol	33.25	39.13
Bra025714.1-P	Field mustard	cytosol	24.54	39.08
Zm00001d020738_P001	Maize	plastid	34.3	39.04
Zm00001d016895_P001	Maize	cytosol	34.3	38.92
Zm00001d031804_P001	Maize	cytosol	33.51	38.72
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	30.61	38.67
Zm00001d025549_P001	Maize	cytosol	32.72	38.51
Solyc10g050880.1.1	Tomato	cytosol	31.66	38.46
PGSC0003DMT400066385	Potato	cytosol	31.13	38.44
VIT_03s0063g00700.t01	Wine grape	cytosol	32.72	38.39
VIT_03s0063g00720.t01	Wine grape	cytosol	32.72	38.39
Solyc01g108530.2.1	Tomato	cytosol	30.87	38.11
Zm00001d020744_P001	Maize	cytosol	29.55	37.97
KRH50257	Soybean	cytosol	32.45	37.85
AT2G03550.1	Thale cress	cytosol	31.13	37.82
PGSC0003DMT400088862	Potato	cytosol	34.3	37.79
VIT_03s0063g00830.t01	Wine grape	cytosol	30.08	37.75
AT1G19190.1	Thale cress	cytosol	31.66	37.74
AT1G49660.1	Thale cress	cytosol	31.66	37.62
Bra040667.1-P	Field mustard	cytosol	31.66	37.62
CDY29339	Canola	cytosol	31.4	37.3
CDY28094	Canola	cytosol	31.4	37.07
CDY20870	Canola	cytosol	30.87	36.68
CDY28098	Canola	cytosol	31.13	36.65
CDY41024	Canola	peroxisome	31.13	36.53
Bra018807.1-P	Field mustard	cytosol	31.4	36.5
CDY51035	Canola	cytosol	31.13	36.2
KRH71160	Soybean	nucleus	37.47	36.13
VIT_03s0063g00810.t01	Wine grape	cytosol	29.82	36.1
CDY51033	Canola	cytosol	30.34	35.94
CDY02986	Canola	cytosol	33.25	35.69
VIT_03s0063g00790.t01	Wine grape	cytosol	28.23	35.55
PGSC0003DMT400066383	Potato	cytosol	28.5	35.53
CDX96674	Canola	cytosol	30.34	35.38
AT1G49640.1	Thale cress	cytosol	29.02	34.92
Bra018809.1-P	Field mustard	cytosol	29.02	34.81
KRH71163	Soybean	cytosol	27.44	34.44
Bra016519.1-P	Field mustard	cytosol	29.55	34.25
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	27.97	33.65
Bra018808.1-P	Field mustard	plastid	33.25	33.07
CDY28095	Canola	plastid	32.98	32.89
CDY51034	Canola	plastid	32.72	32.63
Zm00001d020742_P001	Maize	cytosol	24.54	32.29
CDY16521	Canola	mitochondrion	32.19	32.11
Bra014213.1-P	Field mustard	mitochondrion	31.93	31.84
CDY32845	Canola	mitochondrion	30.61	31.69
AT1G49650.1	Thale cress	mitochondrion	31.13	31.55
VIT_03s0063g00770.t01	Wine grape	plastid	31.93	29.09
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	37.73	23.21

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1D6I603	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS
ProteinID:ONM55520.1	PFAM:PF07859	ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF164	SUPFAM:SSF53474
TMHMM:TMhelix	UniParc:UPI000220BED3	EnsemblPlantsGene:Zm00001d020741	EnsemblPlants:Zm00001d020741_P001	EnsemblPlants:Zm00001d020741_T001	SEG:seg

Description

Gibberellin receptor GID1L2

Coordinates

chr7:+:130840864..130842003

Molecular Weight (calculated)

41079.1 Da

IEP (calculated)

9.201

GRAVY (calculated)

-0.138

Length

379 amino acids

Sequence
(BLAST)

001: MVAKTRTRRQ LAKLALLLLA LLLLLAAILL CVFLIPRHHR RPLPPASPPG AGNASNPDDS IVAFDFSPYL IMYKSGRVNR LDGTARCSAG VDEATGVTSK
101: DVVIDSGTGL AARMYLPPAP RGTQSKGLGK RHPVLVFYHG GAFVIESAFT PLYHAYLNGV AAKARVVAVS VEYRLAPEHR LPTAYDDSWQ ALNWVARNAG
201: SGPEPWLRDR GNLSRLFVAG DSAGANIAHD MAMRAGTGGG LDGGAAIAGL LLLDPYFWGK KPVAGETTDP ARRRQYEATW SFICGGRYSI DDPLVDPLSM
301: PASEWRKLAC SRVAVTSSGL DDFRPRGLAY VAALRDSGWD GETEQYETPG ERHVYFLDRP KDPNSVKELA FVTGFLSRE

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.