Factsheet for Zm00001d020736_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d052230_P001
Zm00001d053989_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	Zm00001d053989_P003	AT4G10930.1	21798944
AT3G48690.1	Zm00001d052230_P001	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35780	Sorghum	extracellular, vacuole	92.77	90.68
Zm00001d005905_P001	Maize	endoplasmic reticulum, golgi	88.73	87.22
TraesCS5D01G248700.1	Wheat	endoplasmic reticulum, vacuole	82.08	82.32
TraesCS5B01G240200.1	Wheat	endoplasmic reticulum, vacuole	81.21	81.69
HORVU5Hr1G069040.1	Barley	endoplasmic reticulum, vacuole	81.21	81.21
Os09t0461500-01	Rice	golgi, mitochondrion	81.5	81.03
TraesCS5A01G242300.1	Wheat	extracellular, golgi	80.64	80.4
Zm00001d031801_P001	Maize	endoplasmic reticulum	59.83	58.31
GSMUA_Achr6P04360_001	Banana	cytosol	44.51	52.56
Zm00001d020741_P001	Maize	golgi, mitochondrion, vacuole	57.23	52.24
Zm00001d050479_P001	Maize	extracellular, plasma membrane, vacuole	55.78	50.92
GSMUA_Achr6P04230_001	Banana	cytosol	34.39	50.85
GSMUA_Achr3P06860_001	Banana	cytosol	34.68	48.98
GSMUA_Achr7P12950_001	Banana	cytosol	45.66	48.92
Zm00001d020707_P001	Maize	cytosol, extracellular	37.86	45.8
Zm00001d037288_P001	Maize	cytosol, extracellular	40.17	44.69
Zm00001d020737_P001	Maize	extracellular	40.46	44.44
Zm00001d020732_P001	Maize	plastid	39.6	44.19
VIT_03s0063g00700.t01	Wine grape	cytosol	41.04	43.96
VIT_03s0063g00720.t01	Wine grape	cytosol	41.04	43.96
PGSC0003DMT400066384	Potato	cytosol	26.01	43.9
Zm00001d031804_P001	Maize	cytosol	41.62	43.9
Zm00001d005910_P001	Maize	cytosol	41.04	43.43
Zm00001d037180_P001	Maize	cytosol, extracellular	40.46	43.08
Zm00001d031805_P001	Maize	cytosol	33.53	42.8
Solyc01g108570.2.1	Tomato	cytosol, extracellular	38.15	42.58
Zm00001d016895_P001	Maize	cytosol	40.75	42.22
Solyc01g108560.2.1	Tomato	cytosol, plastid	36.71	42.19
VIT_03s0063g00730.t01	Wine grape	cytosol	39.02	42.19
KRH71164	Soybean	cytosol	36.99	42.11
Zm00001d005909_P001	Maize	plasma membrane	43.64	41.83
Zm00001d020740_P001	Maize	cytosol	39.88	41.82
PGSC0003DMT400066389	Potato	cytosol	35.26	41.78
PGSC0003DMT400066392	Potato	cytosol	37.57	41.53
VIT_03s0063g00750.t01	Wine grape	cytosol	38.73	41.49
Solyc01g108540.2.1	Tomato	cytosol	36.99	41.42
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	35.84	41.33
Zm00001d044921_P001	Maize	cytosol, extracellular	39.31	41.21
PGSC0003DMT400066386	Potato	cytosol	36.99	41.03
PGSC0003DMT400091080	Potato	cytosol	36.99	41.03
Zm00001d025549_P001	Maize	cytosol	38.15	40.99
VIT_03s0063g00810.t01	Wine grape	cytosol	36.99	40.89
KRH50255	Soybean	cytosol	35.84	40.79
Zm00001d050493_P001	Maize	cytosol, extracellular	38.44	40.67
Zm00001d050837_P001	Maize	cytosol	39.02	40.66
KRH50256	Soybean	cytosol	37.28	40.57
Zm00001d020738_P001	Maize	plastid	39.02	40.54
VIT_03s0063g00820.t01	Wine grape	cytosol	35.26	40.53
VIT_03s0063g00800.t01	Wine grape	cytosol	34.97	40.33
CDX77920	Canola	cytosol	36.13	40.06
PGSC0003DMT400066385	Potato	cytosol	35.26	39.74
Solyc01g108580.2.1	Tomato	cytosol	35.55	39.42
Solyc01g108530.2.1	Tomato	cytosol	34.97	39.41
Bra019558.1-P	Field mustard	cytosol	36.13	38.7
CDY37916	Canola	cytosol	36.13	38.7
VIT_03s0063g00740.t01	Wine grape	cytosol	35.84	38.51
Bra025117.1-P	Field mustard	cytosol	33.81	38.49
AT3G48690.1	Thale cress	cytosol	35.55	37.96
CDY28098	Canola	cytosol	35.26	37.89
AT2G03550.1	Thale cress	cytosol	34.1	37.82
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	34.39	37.78
KRH71163	Soybean	cytosol	32.95	37.75
KRH71161	Soybean	cytosol	29.77	37.73
CDX83045	Canola	cytosol	35.26	37.65
VIT_03s0063g00790.t01	Wine grape	cytosol	32.66	37.54
Bra029913.1-P	Field mustard	cytosol	35.26	37.42
VIT_03s0063g00830.t01	Wine grape	cytosol	32.66	37.42
AT3G48700.1	Thale cress	cytosol	35.55	37.39
CDY51033	Canola	cytosol	34.39	37.19
Solyc10g050880.1.1	Tomato	cytosol	33.53	37.18
PGSC0003DMT400088862	Potato	cytosol	36.71	36.92
CDY67024	Canola	cytosol	34.39	36.84
CDY28094	Canola	cytosol	34.1	36.76
AT1G49660.1	Thale cress	cytosol	33.81	36.68
CDX68486	Canola	cytosol	34.1	36.53
Zm00001d020744_P001	Maize	cytosol	30.92	36.27
KRH71162	Soybean	cytosol, nucleus	34.68	36.04
Bra029912.1-P	Field mustard	cytosol	33.53	35.91
Bra025714.1-P	Field mustard	cytosol	24.57	35.71
CDY41024	Canola	peroxisome	33.24	35.6
Bra018807.1-P	Field mustard	cytosol	33.53	35.58
AT1G49640.1	Thale cress	cytosol	32.37	35.56
Bra040667.1-P	Field mustard	cytosol	32.66	35.42
CDY20870	Canola	cytosol	32.66	35.42
CDY51035	Canola	cytosol	33.24	35.28
Bra018809.1-P	Field mustard	cytosol	32.08	35.13
CDY29339	Canola	cytosol	32.37	35.11
KRH50257	Soybean	cytosol	32.66	34.77
AT1G19190.1	Thale cress	cytosol	31.79	34.59
PGSC0003DMT400066383	Potato	cytosol	29.77	33.88
Bra018808.1-P	Field mustard	plastid	36.71	33.33
KRH71160	Soybean	nucleus	37.57	33.08
CDY28095	Canola	plastid	36.13	32.89
CDX96674	Canola	cytosol	30.64	32.62
CDY02986	Canola	cytosol	33.24	32.58
CDY51034	Canola	plastid	35.55	32.37
AT1G49650.1	Thale cress	mitochondrion	34.97	32.35
Bra016519.1-P	Field mustard	cytosol	30.35	32.11
CDY16521	Canola	mitochondrion	35.26	32.11
Bra014213.1-P	Field mustard	mitochondrion	34.97	31.84
CDY32845	Canola	mitochondrion	32.95	31.15
VIT_03s0063g00770.t01	Wine grape	plastid	37.28	31.01
Zm00001d020742_P001	Maize	cytosol	25.43	30.56
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	41.91	23.54

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1D6I5Z8	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS
ProteinID:ONM55515.1	PFAM:PF07859	ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF165	SUPFAM:SSF53474
SignalP:SignalP-noTM	UniParc:UPI000220A07B	EnsemblPlantsGene:Zm00001d020736	EnsemblPlants:Zm00001d020736_P001	EnsemblPlants:Zm00001d020736_T001	SEG:seg

Description

Gibberellin receptor GID1L2

Coordinates

chr7:-:130689762..130690802

Molecular Weight (calculated)

37123.3 Da

IEP (calculated)

8.292

GRAVY (calculated)

0.134

Length

346 amino acids

Sequence
(BLAST)

001: MVASRILLPL LLSLFLCSHC CTGAAAAKRQ LLQAQSQVKF DFSPFLIEYK NGRVKRLMGT NVVSASSDAL TGVTSRDVTI DASTGVAARL YLPSFRASAR
101: VPVLVYFHGG AFVVESAFTP IYHAYLNTLA ARAGVVAVSV NYRLAPEHPL PAAYDDSWAA LRWVLASAAG SDPWLAQYGD LFRLFLAGDS AGGNIAHNLA
201: LRAGEEGLDG GARIKGVALL DPYFQGRSPV GAESADPAYL QSAARTWSFI CAGRYPINHP YADPLLLPAS SWQHLGASRV LVTVSGQDRL SPWQRGYYAA
301: LQGSGWPGEA ELYETPGEGH VYFLTKLGSP QALAEMAKLV AFINRD

Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)

001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA

Arabidopsis Description

CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.