Factsheet for GSMUA_Achr9P24230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P31620_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	GSMUA_Achr3P31620_001	AT4G10930.1	21798944
AT3G48690.1	GSMUA_Achr10P...	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P24240_001	Banana	cytosol	84.91	69.23
GSMUA_Achr3P06860_001	Banana	cytosol	47.17	51.02
GSMUA_Achr6P04230_001	Banana	cytosol	44.15	50.0
GSMUA_Achr6P04360_001	Banana	cytosol	49.06	44.37
GSMUA_Achr5P11010_001	Banana	cytosol	49.81	44.15
PGSC0003DMT400066384	Potato	cytosol	33.21	42.93
VIT_03s0063g00730.t01	Wine grape	cytosol	51.7	42.81
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	47.92	42.33
GSMUA_Achr7P12950_001	Banana	cytosol	51.32	42.11
VIT_03s0063g00830.t01	Wine grape	cytosol	47.92	42.05
Solyc10g050880.1.1	Tomato	cytosol	49.43	41.99
VIT_03s0063g00790.t01	Wine grape	cytosol	47.17	41.53
VIT_03s0063g00700.t01	Wine grape	cytosol	50.57	41.49
VIT_03s0063g00720.t01	Wine grape	cytosol	50.57	41.49
Bra025714.1-P	Field mustard	cytosol	36.98	41.18
GSMUA_Achr7P18960_001	Banana	cytosol	50.19	41.05
PGSC0003DMT400091080	Potato	cytosol	47.92	40.71
Solyc01g108570.2.1	Tomato	cytosol, extracellular	47.55	40.65
CDY41024	Canola	peroxisome	49.43	40.56
Solyc01g108540.2.1	Tomato	cytosol	47.17	40.45
PGSC0003DMT400066386	Potato	cytosol	47.55	40.38
VIT_03s0063g00750.t01	Wine grape	cytosol	49.06	40.25
Solyc01g108560.2.1	Tomato	cytosol, plastid	45.66	40.2
PGSC0003DMT400066385	Potato	cytosol	46.42	40.07
Solyc01g108580.2.1	Tomato	cytosol	47.17	40.06
VIT_03s0063g00800.t01	Wine grape	cytosol	45.28	40.0
KRH50256	Soybean	cytosol	47.92	39.94
PGSC0003DMT400066392	Potato	cytosol	46.79	39.62
KRH71164	Soybean	cytosol	45.28	39.47
KRH50255	Soybean	cytosol	45.28	39.47
Solyc01g108530.2.1	Tomato	cytosol	45.66	39.41
VIT_03s0063g00810.t01	Wine grape	cytosol	46.42	39.3
VIT_03s0063g00820.t01	Wine grape	cytosol	44.53	39.2
PGSC0003DMT400066389	Potato	cytosol	42.64	38.7
VIT_03s0063g00740.t01	Wine grape	cytosol	46.79	38.51
CDX77920	Canola	cytosol	44.91	38.14
KRH71162	Soybean	cytosol, nucleus	47.92	38.14
AT3G48690.1	Thale cress	cytosol	46.42	37.96
KRH71163	Soybean	cytosol	43.02	37.75
CDY37916	Canola	cytosol	45.66	37.46
Bra019558.1-P	Field mustard	cytosol	45.66	37.46
AT3G48700.1	Thale cress	cytosol	46.42	37.39
CDX83045	Canola	cytosol	45.66	37.35
PGSC0003DMT400088862	Potato	cytosol	48.3	37.21
PGSC0003DMT400066383	Potato	cytosol	42.64	37.17
Bra025117.1-P	Field mustard	cytosol	42.64	37.17
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	44.15	37.14
Bra029913.1-P	Field mustard	cytosol	45.66	37.12
AT1G19190.1	Thale cress	cytosol	44.53	37.11
AT2G03550.1	Thale cress	cytosol	43.4	36.86
CDX68486	Canola	cytosol	44.91	36.84
CDX96674	Canola	cytosol	44.91	36.62
Bra016519.1-P	Field mustard	cytosol	44.91	36.39
CDY67024	Canola	cytosol	44.15	36.22
KRH50257	Soybean	cytosol	44.15	36.0
Bra029912.1-P	Field mustard	cytosol	43.77	35.91
KRH71161	Soybean	cytosol	36.98	35.9
CDY28094	Canola	cytosol	43.4	35.83
CDY20870	Canola	cytosol	41.89	34.8
Bra040667.1-P	Field mustard	cytosol	41.51	34.48
AT1G49660.1	Thale cress	cytosol	41.13	34.17
CDY29339	Canola	cytosol	41.13	34.17
Bra018807.1-P	Field mustard	cytosol	41.89	34.05
CDY51035	Canola	cytosol	41.89	34.05
CDY28098	Canola	cytosol	40.75	33.54
CDY51033	Canola	cytosol	40.38	33.44
Bra018809.1-P	Field mustard	cytosol	39.25	32.91
KRH71160	Soybean	nucleus	48.68	32.82
AT1G49640.1	Thale cress	cytosol	38.49	32.38
CDY16521	Canola	mitochondrion	44.91	31.32
Bra014213.1-P	Field mustard	mitochondrion	44.91	31.32
CDY02986	Canola	cytosol	41.51	31.16
AT1G49650.1	Thale cress	mitochondrion	43.77	31.02
Bra018808.1-P	Field mustard	plastid	43.77	30.45
CDY32845	Canola	mitochondrion	41.51	30.05
CDY28095	Canola	plastid	43.02	30.0
CDY51034	Canola	plastid	42.64	29.74
VIT_03s0063g00770.t01	Wine grape	plastid	46.04	29.33
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	48.3	20.78

Protein Annotations

EnsemblPlants:GSMUA_Achr9P24230_001	EnsemblPlants:GSMUA_Achr9T24230_001	EnsemblPlantsGene:GSMUA_Achr9G24230_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
InterPro:Lipase_GDXG_put_SER_AS	PANTHER:PTHR23024	PANTHER:PTHR23024:SF257	PFAM:PF07859	ScanProsite:PS01174	SEG:seg
SUPFAM:SSF53474	UniParc:UPI000295A951	UniProt:M0U330	MapMan:35.1	:	:

Description

Putative Probable gibberellin receptor GID1L1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G24230_001]

Coordinates

chr9:+:29033259..29034215

Molecular Weight (calculated)

28965.4 Da

IEP (calculated)

5.548

GRAVY (calculated)

-0.013

Length

265 amino acids

Sequence
(BLAST)

001: MAASNEIALE LAPIIRVYKD GRIERLNADV HLPPSVDTAT GVASKDLPVF VYYHGGCFCI GSAFSSIYHD FLNTIVSTAS VIAVSVDYRL APEHLIPAAY
101: EDAWCALQWV ASHAEGGPEP WLAKDRTDFT RLFLAGDSAG ANIAHNVAMR VGRVDHPFIP PHTVDSMWQL ITGGADNDDP RLNPLAEGAP SLAGLGCRRV
201: MVAVAEKDTL RDRGRAYFEA LRKSGWGGEA QLWETQGEDH VFFLFKPGCN EVSLLVKRLV SFLKD

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.