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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 3
  • nucleus 1
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:cytosol
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr3P31620_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 GSMUA_Achr3P31620_001 AT4G10930.1 21798944
AT3G48690.1 GSMUA_Achr10P... AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P24230_001 Banana cytosol 69.23 84.91
GSMUA_Achr6P04230_001 Banana cytosol 37.23 51.71
GSMUA_Achr3P06860_001 Banana cytosol 38.46 51.02
GSMUA_Achr6P04360_001 Banana cytosol 45.85 50.85
GSMUA_Achr5P11010_001 Banana cytosol 44.0 47.83
VIT_03s0063g00730.t01 Wine grape cytosol 44.92 45.62
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 41.23 44.67
GSMUA_Achr7P18960_001 Banana cytosol 44.31 44.44
VIT_03s0063g00830.t01 Wine grape cytosol 41.23 44.37
KRH71164 Soybean cytosol 41.23 44.08
VIT_03s0063g00700.t01 Wine grape cytosol 43.69 43.96
VIT_03s0063g00720.t01 Wine grape cytosol 43.69 43.96
KRH50256 Soybean cytosol 42.77 43.71
VIT_03s0063g00800.t01 Wine grape cytosol 40.31 43.67
Solyc10g050880.1.1 Tomato cytosol 41.85 43.59
KRH50255 Soybean cytosol 40.62 43.42
PGSC0003DMT400066386 Potato cytosol 41.54 43.27
Solyc01g108570.2.1 Tomato cytosol, extracellular 41.23 43.23
VIT_03s0063g00790.t01 Wine grape cytosol 40.0 43.19
Solyc01g108540.2.1 Tomato cytosol 40.92 43.04
GSMUA_Achr7P12950_001 Banana cytosol 42.77 43.03
PGSC0003DMT400066392 Potato cytosol 41.23 42.81
VIT_03s0063g00750.t01 Wine grape cytosol 42.46 42.72
PGSC0003DMT400066385 Potato cytosol 40.31 42.67
KRH71162 Soybean cytosol, nucleus 43.69 42.64
PGSC0003DMT400091080 Potato cytosol 40.92 42.63
PGSC0003DMT400066389 Potato cytosol 38.15 42.47
Solyc01g108580.2.1 Tomato cytosol 40.62 42.31
CDX77920 Canola cytosol 40.62 42.31
VIT_03s0063g00820.t01 Wine grape cytosol 39.08 42.19
VIT_03s0063g00810.t01 Wine grape cytosol 40.62 42.17
Solyc01g108530.2.1 Tomato cytosol 39.69 42.02
PGSC0003DMT400066384 Potato cytosol 26.46 41.95
Solyc01g108560.2.1 Tomato cytosol, plastid 38.77 41.86
AT3G48690.1 Thale cress cytosol 41.54 41.67
CDY41024 Canola peroxisome 41.23 41.49
VIT_03s0063g00740.t01 Wine grape cytosol 40.31 40.68
KRH71161 Soybean cytosol 34.15 40.66
CDY37916 Canola cytosol 40.31 40.56
Bra019558.1-P Field mustard cytosol 40.31 40.56
CDX83045 Canola cytosol 40.0 40.12
Bra025714.1-P Field mustard cytosol 29.23 39.92
Bra029913.1-P Field mustard cytosol 40.0 39.88
AT3G48700.1 Thale cress cytosol 40.31 39.82
KRH71163 Soybean cytosol 36.62 39.4
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 38.15 39.37
CDY67024 Canola cytosol 39.08 39.32
CDX68486 Canola cytosol 39.08 39.32
AT1G19190.1 Thale cress cytosol 38.46 39.31
Bra025117.1-P Field mustard cytosol 36.62 39.14
Bra029912.1-P Field mustard cytosol 38.77 39.01
PGSC0003DMT400066383 Potato cytosol 36.31 38.82
KRH50257 Soybean cytosol 38.77 38.77
PGSC0003DMT400088862 Potato cytosol 40.92 38.66
AT2G03550.1 Thale cress cytosol 36.92 38.46
CDX96674 Canola cytosol 38.46 38.46
Bra016519.1-P Field mustard cytosol 38.46 38.23
CDY20870 Canola cytosol 36.62 37.3
CDY28094 Canola cytosol 36.62 37.07
AT1G49660.1 Thale cress cytosol 36.31 36.99
Bra040667.1-P Field mustard cytosol 36.0 36.68
Bra018807.1-P Field mustard cytosol 36.31 36.2
CDY29339 Canola cytosol 35.38 36.05
CDY51035 Canola cytosol 36.0 35.89
CDY28098 Canola cytosol 35.08 35.4
KRH71160 Soybean nucleus 42.77 35.37
CDY51033 Canola cytosol 34.77 35.31
Bra018809.1-P Field mustard cytosol 33.54 34.49
AT1G49640.1 Thale cress cytosol 32.92 33.97
CDY02986 Canola cytosol 36.31 33.43
Bra018808.1-P Field mustard plastid 38.15 32.55
CDY16521 Canola mitochondrion 37.54 32.11
CDY51034 Canola plastid 37.54 32.11
CDY28095 Canola plastid 37.54 32.11
Bra014213.1-P Field mustard mitochondrion 37.23 31.84
AT1G49650.1 Thale cress mitochondrion 36.31 31.55
VIT_03s0063g00770.t01 Wine grape plastid 40.0 31.25
CDY32845 Canola mitochondrion 34.77 30.87
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 42.15 22.24
Protein Annotations
EnsemblPlants:GSMUA_Achr9P24240_001EnsemblPlants:GSMUA_Achr9T24240_001EnsemblPlantsGene:GSMUA_Achr9G24240_001Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058
InterPro:Lipase_GDXG_put_SER_ASPANTHER:PTHR23024PANTHER:PTHR23024:SF257PFAM:PF07859ScanProsite:PS01174SEG:seg
SUPFAM:SSF53474UniParc:UPI0002960788UniProt:M0U331MapMan:35.1::
Description
Putative Probable gibberellin receptor GID1L2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G24240_001]
Coordinates
chr9:+:29034296..29037329
Molecular Weight (calculated)
35349.4 Da
IEP (calculated)
5.367
GRAVY (calculated)
0.155
Length
325 amino acids
Sequence
(BLAST)
001: MSSILYEPLL HVYYLKEIGN HFNFFFEETP LALPSEDTST MAASNEIALE LAPIIRIYKD GRIERLDADV QLPPSVDTAT GVVSKDVPIA AGVTARLYLP
101: AVDAPSKLPV FVYYHGGGFC IGSASSSIYH VFLNTIVSTA SVIAVSVDYR LAPEHLIPAA YEDAWCALRW VASHAEGGPE PCLAKDRTDF TRLFLAGDSA
201: GANIAHNVAM RVAAEGLGVG GARVESMVLL HPYFWGTTRL PLNPLADGAP SLAGLGCRRV MVAVAEKDTL RDRGRAYFEA LRKCGWSGEA QLWETQGEDH
301: VFFLFKPGCN EVSLLVQKLV SFLKE
Best Arabidopsis Sequence Match ( AT3G48690.1 )
(BLAST)
001: MDSEIAVDCS PLLKIYKSGR IERLMGEATV PPSSEPQNGV VSKDVVYSAD NNLSVRIYLP EKAAAETDSK LPLLVYFHGG GFIIETAFSP TYHTFLTTSV
101: SASNCVAVSV DYRRAPEHPI SVPFDDSWTA LKWVFTHITG SGQEDWLNKH ADFSRVFLSG DSAGANIVHH MAMRAAKEKL SPGLNDTGIS GIILLHPYFW
201: SKTPIDEKDT KDETLRMKIE AFWMMASPNS KDGTDDPLLN VVQSESVDLS GLGCGKVLVM VAEKDALVRQ GWGYAAKLEK SGWKGEVEVV ESEGEDHVFH
301: LLKPECDNAI EVMHKFSGFI KGGN
Arabidopsis Description
CXE12Probable carboxylesterase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMN0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.