Factsheet for TraesCS5D01G249000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G242000.1	Wheat	cytosol	94.59	94.59
TraesCS5B01G240500.1	Wheat	cytosol	94.27	93.38
TraesCS5D01G249100.1	Wheat	cytosol	66.24	66.88
TraesCS5D01G248500.1	Wheat	cytosol	52.23	51.73
TraesCS5D01G248100.1	Wheat	plastid	61.47	51.19
GSMUA_Achr6P04230_001	Banana	cytosol	37.9	50.85
TraesCS5D01G244200.1	Wheat	cytosol	52.23	50.62
TraesCS5D01G247700.1	Wheat	plastid	60.19	49.09
TraesCS5D01G068400.1	Wheat	cytosol	48.41	48.87
GSMUA_Achr6P04360_001	Banana	cytosol	45.54	48.81
GSMUA_Achr3P06860_001	Banana	cytosol	37.9	48.57
TraesCS6D01G038600.1	Wheat	cytosol	50.0	48.31
TraesCS3D01G124000.1	Wheat	cytosol	47.13	47.28
TraesCS2D01G315300.1	Wheat	cytosol	47.45	46.27
VIT_03s0063g00800.t01	Wine grape	cytosol	40.76	42.67
TraesCS2D01G389600.1	Wheat	cytosol	43.95	42.59
GSMUA_Achr7P12950_001	Banana	cytosol	43.63	42.41
KRH71163	Soybean	cytosol	40.76	42.38
PGSC0003DMT400066384	Potato	cytosol	27.39	41.95
TraesCS4D01G328100.1	Wheat	cytosol	42.99	41.93
TraesCS2D01G389500.1	Wheat	cytosol	40.13	41.72
VIT_03s0063g00820.t01	Wine grape	cytosol	39.81	41.53
TraesCS7D01G173500.1	Wheat	cytosol	42.68	41.49
TraesCS5D01G076000.1	Wheat	cytosol	46.18	41.31
VIT_03s0063g00790.t01	Wine grape	cytosol	39.49	41.2
VIT_03s0063g00700.t01	Wine grape	cytosol	42.36	41.18
KRH71164	Soybean	cytosol	39.81	41.12
TraesCS5D01G248900.1	Wheat	cytosol	43.95	41.07
TraesCS7D01G173400.1	Wheat	cytosol	42.36	41.05
PGSC0003DMT400066385	Potato	cytosol	40.13	41.04
KRH50256	Soybean	cytosol	41.4	40.88
VIT_03s0063g00720.t01	Wine grape	cytosol	42.04	40.87
KRH50255	Soybean	cytosol	39.49	40.79
VIT_03s0063g00810.t01	Wine grape	cytosol	40.45	40.58
VIT_03s0063g00750.t01	Wine grape	cytosol	41.72	40.56
TraesCS5D01G248700.1	Wheat	endoplasmic reticulum, vacuole	43.95	40.0
TraesCS2D01G498000.1	Wheat	cytosol	40.76	39.88
TraesCS7D01G173300.1	Wheat	extracellular	45.22	39.78
VIT_03s0063g00830.t01	Wine grape	cytosol	38.22	39.74
TraesCS5D01G444200.1	Wheat	cytosol	41.72	39.46
Solyc01g108530.2.1	Tomato	cytosol	38.53	39.41
VIT_03s0063g00730.t01	Wine grape	cytosol	39.81	39.06
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	37.26	39.0
TraesCS5D01G249600.1	Wheat	cytosol	40.13	38.89
AT3G48690.1	Thale cress	cytosol	39.81	38.58
TraesCS5D01G417100.1	Wheat	endoplasmic reticulum	41.4	38.58
VIT_03s0063g00740.t01	Wine grape	cytosol	39.49	38.51
KRH71161	Soybean	cytosol	33.44	38.46
Solyc01g108540.2.1	Tomato	cytosol	37.58	38.19
Solyc01g108570.2.1	Tomato	cytosol, extracellular	37.58	38.06
CDY28094	Canola	cytosol	38.85	38.01
PGSC0003DMT400066386	Potato	cytosol	37.58	37.82
TraesCS7D01G173800.1	Wheat	golgi	37.9	37.78
CDX83045	Canola	cytosol	38.85	37.65
CDX77920	Canola	cytosol	37.26	37.5
PGSC0003DMT400091080	Potato	cytosol	37.26	37.5
Bra019558.1-P	Field mustard	cytosol	38.53	37.46
CDY37916	Canola	cytosol	38.53	37.46
Bra018807.1-P	Field mustard	cytosol	38.85	37.42
Bra029913.1-P	Field mustard	cytosol	38.85	37.42
PGSC0003DMT400066392	Potato	cytosol	37.26	37.38
Bra040667.1-P	Field mustard	cytosol	37.9	37.3
KRH71162	Soybean	cytosol, nucleus	39.49	37.24
Solyc10g050880.1.1	Tomato	cytosol	36.94	37.18
CDX68486	Canola	cytosol	38.22	37.15
CDY51035	Canola	cytosol	38.53	37.12
CDY20870	Canola	cytosol	37.58	36.99
CDY29339	Canola	cytosol	37.58	36.99
Solyc01g108580.2.1	Tomato	cytosol	36.62	36.86
Bra025117.1-P	Field mustard	cytosol	35.67	36.84
TraesCS4D01G130000.1	Wheat	extracellular, vacuole	43.63	36.83
AT1G49640.1	Thale cress	cytosol	36.94	36.83
AT1G49660.1	Thale cress	cytosol	37.26	36.68
Solyc01g108560.2.1	Tomato	cytosol, plastid	35.03	36.54
AT3G48700.1	Thale cress	cytosol	38.22	36.47
CDY28098	Canola	cytosol	37.26	36.34
PGSC0003DMT400066389	Potato	cytosol	33.76	36.3
CDY67024	Canola	cytosol	37.26	36.22
AT2G03550.1	Thale cress	cytosol	35.99	36.22
PGSC0003DMT400066383	Potato	cytosol	35.03	36.18
TraesCS5D01G249400.1	Wheat	endoplasmic reticulum, plasma membrane	42.99	36.1
KRH50257	Soybean	cytosol	37.26	36.0
CDY41024	Canola	peroxisome	36.94	35.91
AT1G19190.1	Thale cress	cytosol	36.31	35.85
Bra025714.1-P	Field mustard	cytosol	27.07	35.71
Bra029912.1-P	Field mustard	cytosol	36.62	35.6
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	35.67	35.56
CDY51033	Canola	cytosol	35.99	35.31
TraesCS5D01G249700.2	Wheat	cytosol	39.81	35.21
Bra018809.1-P	Field mustard	cytosol	35.35	35.13
TraesCS5D01G249500.1	Wheat	endoplasmic reticulum, golgi	42.36	35.09
TraesCS7D01G046800.1	Wheat	cytosol	40.76	34.88
CDX96674	Canola	cytosol	35.35	34.15
TraesCS2D01G360900.1	Wheat	extracellular	42.36	33.76
PGSC0003DMT400088862	Potato	cytosol	36.62	33.43
Bra016519.1-P	Field mustard	cytosol	34.71	33.33
KRH71160	Soybean	nucleus	41.4	33.08
TraesCS2D01G015900.1	Wheat	cytosol	42.04	32.12
CDY02986	Canola	cytosol	35.67	31.73
VIT_03s0063g00770.t01	Wine grape	plastid	41.72	31.49
CDY16521	Canola	mitochondrion	37.58	31.05
Bra014213.1-P	Field mustard	mitochondrion	37.26	30.79
AT1G49650.1	Thale cress	mitochondrion	35.99	30.21
Bra018808.1-P	Field mustard	plastid	36.62	30.18
TraesCS7D01G089100.1	Wheat	cytosol	41.4	30.02
CDY28095	Canola	plastid	35.99	29.74
TraesCS2D01G051400.1	Wheat	cytosol	42.68	29.65
CDY32845	Canola	mitochondrion	34.39	29.51
TraesCS7D01G046600.1	Wheat	cytosol	40.13	29.51
CDY51034	Canola	plastid	35.67	29.47
TraesCS2D01G022400.1	Wheat	cytosol	42.04	28.95
TraesCS7D01G046900.1	Wheat	mitochondrion	41.08	28.6
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	40.76	20.78
TraesCS3D01G500400.1	Wheat	cytosol	4.78	9.38

Protein Annotations

EnsemblPlants:TraesCS5D01G249000.1	EnsemblPlantsGene:TraesCS5D01G249000	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS
PANTHER:PTHR23024	PANTHER:PTHR23024:SF257	PFAM:PF07859	ScanProsite:PS01174	SEG:seg	SUPFAM:SSF53474
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:355795588..355796532

Molecular Weight (calculated)

33643.9 Da

IEP (calculated)

4.955

GRAVY (calculated)

-0.055

Length

314 amino acids

Sequence
(BLAST)

001: MESGADEVVF DCDDYRIYRS GKMDRLCRPA REPTGLDPAT GVTSKDVVLD PDTGVSVRLF LPTSPDPSKK LPILVFYHGG GFLVESAVSP QYHNYVASLA
101: AAAGVVAVSV EYRLAPEHPV PAAYDDAWAA LSWAASAQDE WLAEHGDSAR LFLAGDSAGG NIVHNVLIRA SFQPAPRVEG AILLHPRFGG NTFLEGEVEA
201: KAKDMAMIWE FACPGAVGGA DDPRMNPMAP GAPGMENLRC ERMLVCAGEK DWLAARDRAY YAAVTTSAWR GSVSRGGVAW IESEGEGHVF FLKKPDCARA
301: KELMARVVAF IAGA

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.