Factsheet for TraesCS5D01G248900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G242100.1	Wheat	cytosol	89.88	89.61
TraesCS5B01G240400.1	Wheat	mitochondrion	88.99	88.46
TraesCS5D01G076000.1	Wheat	cytosol	61.61	58.97
GSMUA_Achr6P04230_001	Banana	cytosol	35.12	50.43
GSMUA_Achr6P04360_001	Banana	cytosol	42.86	49.15
GSMUA_Achr7P12950_001	Banana	cytosol	47.02	48.92
GSMUA_Achr3P06860_001	Banana	cytosol	35.42	48.57
TraesCS5D01G248700.1	Wheat	endoplasmic reticulum, vacuole	47.92	46.67
TraesCS5D01G417100.1	Wheat	endoplasmic reticulum	46.13	45.99
TraesCS5D01G248500.1	Wheat	cytosol	43.15	45.74
TraesCS7D01G173500.1	Wheat	cytosol	43.75	45.51
TraesCS7D01G173400.1	Wheat	cytosol	43.45	45.06
TraesCS5D01G249100.1	Wheat	cytosol	41.67	45.02
TraesCS5D01G249000.1	Wheat	cytosol	41.07	43.95
TraesCS2D01G389600.1	Wheat	cytosol	42.26	43.83
TraesCS2D01G389500.1	Wheat	cytosol	38.39	42.72
TraesCS2D01G360900.1	Wheat	extracellular	50.0	42.64
TraesCS5D01G249600.1	Wheat	cytosol	41.07	42.59
TraesCS7D01G173800.1	Wheat	golgi	39.88	42.54
TraesCS6D01G038600.1	Wheat	cytosol	41.07	42.46
TraesCS5D01G249500.1	Wheat	endoplasmic reticulum, golgi	47.32	41.95
VIT_03s0063g00800.t01	Wine grape	cytosol	37.2	41.67
TraesCS4D01G328100.1	Wheat	cytosol	39.88	41.61
VIT_03s0063g00750.t01	Wine grape	cytosol	39.58	41.18
TraesCS5D01G068400.1	Wheat	cytosol	37.5	40.51
PGSC0003DMT400066384	Potato	cytosol	24.7	40.49
TraesCS2D01G498000.1	Wheat	cytosol	38.39	40.19
TraesCS5D01G244200.1	Wheat	cytosol	38.69	40.12
PGSC0003DMT400066389	Potato	cytosol	34.82	40.07
VIT_03s0063g00830.t01	Wine grape	cytosol	36.01	40.07
TraesCS7D01G173300.1	Wheat	extracellular	42.56	40.06
Solyc01g108570.2.1	Tomato	cytosol, extracellular	36.9	40.0
CDY67024	Canola	cytosol	38.39	39.94
PGSC0003DMT400066392	Potato	cytosol	37.2	39.94
VIT_03s0063g00820.t01	Wine grape	cytosol	35.71	39.87
KRH50255	Soybean	cytosol	36.01	39.8
KRH71164	Soybean	cytosol	36.01	39.8
TraesCS3D01G124000.1	Wheat	cytosol	36.9	39.62
VIT_03s0063g00790.t01	Wine grape	cytosol	35.42	39.53
TraesCS2D01G315300.1	Wheat	cytosol	37.8	39.44
PGSC0003DMT400066386	Potato	cytosol	36.61	39.42
PGSC0003DMT400066385	Potato	cytosol	36.01	39.41
Solyc01g108530.2.1	Tomato	cytosol	36.01	39.41
VIT_03s0063g00730.t01	Wine grape	cytosol	37.5	39.38
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	35.12	39.33
VIT_03s0063g00720.t01	Wine grape	cytosol	37.8	39.32
KRH50256	Soybean	cytosol	37.2	39.31
Solyc01g108540.2.1	Tomato	cytosol	36.01	39.16
TraesCS5D01G444200.1	Wheat	cytosol	38.69	39.16
VIT_03s0063g00740.t01	Wine grape	cytosol	37.5	39.13
VIT_03s0063g00810.t01	Wine grape	cytosol	36.31	38.98
Bra029912.1-P	Field mustard	cytosol	37.2	38.7
VIT_03s0063g00700.t01	Wine grape	cytosol	37.2	38.7
Solyc01g108560.2.1	Tomato	cytosol, plastid	34.52	38.54
CDX77920	Canola	cytosol	35.71	38.46
Solyc10g050880.1.1	Tomato	cytosol	35.71	38.46
AT3G48700.1	Thale cress	cytosol	37.5	38.3
Bra025117.1-P	Field mustard	cytosol	34.52	38.16
PGSC0003DMT400091080	Potato	cytosol	35.42	38.14
Bra019558.1-P	Field mustard	cytosol	36.61	38.08
CDY37916	Canola	cytosol	36.61	38.08
KRH71163	Soybean	cytosol	33.93	37.75
CDX83045	Canola	cytosol	36.31	37.65
Solyc01g108580.2.1	Tomato	cytosol	34.82	37.5
CDX68486	Canola	cytosol	36.01	37.46
Bra029913.1-P	Field mustard	cytosol	36.31	37.42
KRH71161	Soybean	cytosol	30.36	37.36
KRH50257	Soybean	cytosol	36.01	37.23
TraesCS4D01G130000.1	Wheat	extracellular, vacuole	41.07	37.1
AT3G48690.1	Thale cress	cytosol	35.71	37.04
AT2G03550.1	Thale cress	cytosol	34.23	36.86
CDY51033	Canola	cytosol	34.82	36.56
CDY28098	Canola	cytosol	34.82	36.34
CDY28094	Canola	cytosol	34.52	36.14
Bra040667.1-P	Field mustard	cytosol	34.23	36.05
CDX96674	Canola	cytosol	34.52	35.69
Bra018807.1-P	Field mustard	cytosol	34.52	35.58
CDY20870	Canola	cytosol	33.63	35.42
CDY29339	Canola	cytosol	33.63	35.42
TraesCS5D01G247700.1	Wheat	plastid	40.48	35.32
Bra025714.1-P	Field mustard	cytosol	25.0	35.29
TraesCS5D01G249400.1	Wheat	endoplasmic reticulum, plasma membrane	39.29	35.29
CDY51035	Canola	cytosol	34.23	35.28
TraesCS5D01G249700.2	Wheat	cytosol	37.2	35.21
PGSC0003DMT400066383	Potato	cytosol	31.85	35.2
KRH71162	Soybean	cytosol, nucleus	34.82	35.14
AT1G49660.1	Thale cress	cytosol	33.04	34.8
PGSC0003DMT400088862	Potato	cytosol	35.42	34.59
AT1G19190.1	Thale cress	cytosol	32.74	34.59
Bra018809.1-P	Field mustard	cytosol	32.44	34.49
CDY41024	Canola	peroxisome	33.04	34.37
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	32.14	34.29
Bra016519.1-P	Field mustard	cytosol	33.33	34.25
AT1G49640.1	Thale cress	cytosol	31.85	33.97
TraesCS5D01G248100.1	Wheat	plastid	37.5	33.42
CDY02986	Canola	cytosol	34.82	33.14
KRH71160	Soybean	nucleus	38.69	33.08
TraesCS7D01G046800.1	Wheat	cytosol	35.12	32.15
AT1G49650.1	Thale cress	mitochondrion	34.23	30.75
CDY16521	Canola	mitochondrion	34.52	30.53
Bra014213.1-P	Field mustard	mitochondrion	34.23	30.26
CDY51034	Canola	plastid	33.93	30.0
TraesCS2D01G015900.1	Wheat	cytosol	36.61	29.93
Bra018808.1-P	Field mustard	plastid	33.93	29.92
TraesCS2D01G051400.1	Wheat	cytosol	40.18	29.87
CDY32845	Canola	mitochondrion	32.14	29.51
VIT_03s0063g00770.t01	Wine grape	plastid	36.31	29.33
CDY28095	Canola	plastid	33.04	29.21
TraesCS2D01G022400.1	Wheat	cytosol	39.29	28.95
TraesCS7D01G046600.1	Wheat	cytosol	35.12	27.63
TraesCS7D01G089100.1	Wheat	cytosol	35.12	27.25
TraesCS7D01G046900.1	Wheat	mitochondrion	35.71	26.61
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	40.48	22.08
TraesCS3D01G500400.1	Wheat	cytosol	4.46	9.38

Protein Annotations

EnsemblPlants:TraesCS5D01G248900.1	EnsemblPlantsGene:TraesCS5D01G248900	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	InterPro:Lipase_GDXG_HIS_AS
PANTHER:PTHR23024	PANTHER:PTHR23024:SF137	PFAM:PF07859	ScanProsite:PS01173	SEG:seg	SUPFAM:SSF53474
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:355794501..355795511

Molecular Weight (calculated)

36300.0 Da

IEP (calculated)

5.675

GRAVY (calculated)

-0.097

Length

336 amino acids

Sequence
(BLAST)

001: MDPDEGIEFD LSPFAIVYKS GRVQRSGLTS RKSAGTDATT GVTSKDVVID AGTGLAARLF LPTSVPESQK LAVLVYFHGG AYVAESAFSA RYTSYVNALV
101: AAARVVAVSV EYRLAPEHPL PAAYDDAWAA LRWTATSCVS AGPETEPWLA DHGDLTRIFV AGNSSGGNMA HNVVMRAGKE GLRGGARIEG MLLLHPLFLG
201: KAPVPSEGTE STETAERNWR FVCAGKYGLD HPFSNPLVMP PEKWSVLGCR RALVTAAELD LARDRARMYV EALRASAWDG EEAVLYETEG EEHMYYFSKD
301: ARSNSVVAEK AAKEMAIVVS FIKLTNPSDC NIRSTL

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.