Factsheet for TraesCSU01G158400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G436300.1	Wheat	cytosol	98.48	99.74
TraesCS4A01G436500.1	Wheat	cytosol	95.2	97.92
TraesCS7D01G046800.1	Wheat	cytosol	79.8	86.1
TraesCS7D01G046900.1	Wheat	mitochondrion	89.9	78.94
HORVU7Hr1G009170.1	Barley	cytosol	72.98	68.48
TraesCSU01G240900.1	Wheat	cytosol	62.37	60.1
TraesCSU01G008500.1	Wheat	cytosol	63.38	55.04
EER97903	Sorghum	cytosol	62.63	54.75
TraesCSU01G143300.1	Wheat	cytosol	58.33	52.03
Os07t0526600-01	Rice	extracellular	59.6	51.3
GSMUA_Achr6P04360_001	Banana	cytosol	33.08	44.71
GSMUA_Achr3P06860_001	Banana	cytosol	27.27	44.08
GSMUA_Achr6P04230_001	Banana	cytosol	25.25	42.73
PGSC0003DMT400066384	Potato	cytosol	21.97	42.44
VIT_03s0063g00800.t01	Wine grape	cytosol	31.06	41.0
VIT_03s0063g00750.t01	Wine grape	cytosol	33.33	40.87
VIT_03s0063g00720.t01	Wine grape	cytosol	32.83	40.25
Solyc01g108560.2.1	Tomato	cytosol, plastid	30.56	40.2
VIT_03s0063g00830.t01	Wine grape	cytosol	30.56	40.07
VIT_03s0063g00700.t01	Wine grape	cytosol	32.58	39.94
VIT_03s0063g00810.t01	Wine grape	cytosol	31.57	39.94
AT1G49660.1	Thale cress	cytosol	32.07	39.81
Solyc01g108570.2.1	Tomato	cytosol, extracellular	31.06	39.68
Bra025117.1-P	Field mustard	cytosol	30.3	39.47
PGSC0003DMT400066385	Potato	cytosol	30.56	39.41
CDY28098	Canola	cytosol	31.82	39.13
PGSC0003DMT400091080	Potato	cytosol	30.81	39.1
PGSC0003DMT400066386	Potato	cytosol	30.81	39.1
CDY51033	Canola	cytosol	31.57	39.06
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	29.55	39.0
VIT_03s0063g00820.t01	Wine grape	cytosol	29.55	38.87
Solyc01g108540.2.1	Tomato	cytosol	30.3	38.84
PGSC0003DMT400066383	Potato	cytosol	29.8	38.82
KRH50255	Soybean	cytosol	29.8	38.82
VIT_03s0063g00740.t01	Wine grape	cytosol	31.31	38.51
KRH71164	Soybean	cytosol	29.55	38.49
Solyc01g108530.2.1	Tomato	cytosol	29.8	38.44
AT1G49640.1	Thale cress	cytosol	30.56	38.41
GSMUA_Achr7P12950_001	Banana	cytosol	31.31	38.39
PGSC0003DMT400066392	Potato	cytosol	30.3	38.34
CDY28094	Canola	cytosol	31.06	38.32
Bra018809.1-P	Field mustard	cytosol	30.56	38.29
CDY29339	Canola	cytosol	30.81	38.24
CDY20870	Canola	cytosol	30.81	38.24
Bra040667.1-P	Field mustard	cytosol	30.81	38.24
Solyc01g108580.2.1	Tomato	cytosol	30.05	38.14
PGSC0003DMT400066389	Potato	cytosol	28.03	38.01
VIT_03s0063g00790.t01	Wine grape	cytosol	28.54	37.54
Bra029913.1-P	Field mustard	cytosol	30.81	37.42
AT3G48690.1	Thale cress	cytosol	30.56	37.35
CDX83045	Canola	cytosol	30.56	37.35
VIT_03s0063g00730.t01	Wine grape	cytosol	30.05	37.19
Solyc10g050880.1.1	Tomato	cytosol	29.29	37.18
AT2G03550.1	Thale cress	cytosol	29.29	37.18
Bra018807.1-P	Field mustard	cytosol	30.56	37.12
CDX68486	Canola	cytosol	30.05	36.84
CDY51035	Canola	cytosol	30.05	36.5
KRH71163	Soybean	cytosol	27.78	36.42
PGSC0003DMT400088862	Potato	cytosol	31.57	36.34
CDY67024	Canola	cytosol	29.55	36.22
Bra019558.1-P	Field mustard	cytosol	29.55	36.22
CDY37916	Canola	cytosol	29.55	36.22
CDX77920	Canola	cytosol	28.54	36.22
AT3G48700.1	Thale cress	cytosol	30.05	36.17
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	28.54	35.87
KRH50256	Soybean	cytosol	28.79	35.85
AT1G19190.1	Thale cress	cytosol	28.79	35.85
Bra025714.1-P	Field mustard	cytosol	21.46	35.71
Bra029912.1-P	Field mustard	cytosol	29.04	35.6
AT1G49650.1	Thale cress	mitochondrion	33.08	35.03
CDY41024	Canola	peroxisome	28.54	34.98
CDY16521	Canola	mitochondrion	32.83	34.21
Bra014213.1-P	Field mustard	mitochondrion	32.58	33.95
CDY32845	Canola	mitochondrion	31.06	33.61
CDX96674	Canola	cytosol	27.53	33.54
CDY02986	Canola	cytosol	29.8	33.43
Bra018808.1-P	Field mustard	plastid	31.82	33.07
KRH71162	Soybean	cytosol, nucleus	27.53	32.73
Bra016519.1-P	Field mustard	cytosol	27.02	32.72
CDY28095	Canola	plastid	30.81	32.11
KRH71161	Soybean	cytosol	21.97	31.87
CDY51034	Canola	plastid	30.3	31.58
KRH50257	Soybean	cytosol	25.25	30.77
VIT_03s0063g00770.t01	Wine grape	plastid	32.07	30.53
KRH71160	Soybean	nucleus	28.28	28.5
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	30.3	19.48

Protein Annotations

EnsemblPlants:TraesCSU01G158400.1	EnsemblPlantsGene:TraesCSU01G158400	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF225	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chrUn:+:220055009..220056199

Molecular Weight (calculated)

43499.7 Da

IEP (calculated)

7.403

GRAVY (calculated)

-0.168

Length

396 amino acids

Sequence
(BLAST)

001: MHANKTSPAN EKEGRDISVD MYPFIRKYKD GSIERFLRSP FVLASSDQGG NRGVATRDVV VDKATGVSVR LFLPSRAAET AGRNGLPVVL YVHGGSFCTE
101: SAFGRTYHRY ATSLAASAGV LVVSVEYRLA PEFPIPAAYD DAWAALQWAL SLSDPWLASY ADPARTFLAG DSAGGNIVYH TAVRASHEVN DEMMDIAGLI
201: MVHPYFWGAK RLPSELAWAD DSEGAAAVFP PYGVDRLWPF VTAGLAGNDD HRIDPPASEI KSLACRRVLM AVAGKDTLRE RGLDLAARMR DHDAPWPWMM
301: QGHREVTVVE SEGEDHGFHL YSPLRATSKR LMGSIVEFIN QRPNSSLANR MVLGVPTTPF KDVFGYGMAM KSWGTRSSMP RNGAAVPWTR VINIFF

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.