Factsheet for TraesCS1B01G060800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G051400.1	Wheat	cytosol	93.24	91.59
TraesCS2B01G007100.1	Wheat	cytosol	75.0	74.5
TraesCS2B01G006100.1	Wheat	cytosol	54.95	59.37
TraesCS2B01G006500.1	Wheat	cytosol	54.95	59.37
TraesCS2B01G053400.1	Wheat	cytosol	45.72	58.84
EER97903	Sorghum	cytosol	54.95	53.86
Os07t0526600-01	Rice	extracellular	53.6	51.74
GSMUA_Achr6P04360_001	Banana	cytosol	31.31	47.44
GSMUA_Achr6P04230_001	Banana	cytosol	24.55	46.58
VIT_03s0063g00830.t01	Wine grape	cytosol	29.05	42.72
VIT_03s0063g00800.t01	Wine grape	cytosol	28.83	42.67
TraesCS4B01G331200.1	Wheat	cytosol	30.86	42.55
GSMUA_Achr3P06860_001	Banana	cytosol	23.42	42.45
VIT_03s0063g00720.t01	Wine grape	cytosol	30.86	42.41
VIT_03s0063g00750.t01	Wine grape	cytosol	30.86	42.41
TraesCS7B01G077300.1	Wheat	peroxisome	30.86	42.28
TraesCS2B01G526100.1	Wheat	cytosol	30.63	42.11
VIT_03s0063g00700.t01	Wine grape	cytosol	30.63	42.11
VIT_03s0063g00730.t01	Wine grape	cytosol	30.18	41.88
VIT_03s0063g00790.t01	Wine grape	cytosol	28.38	41.86
TraesCS5B01G059800.1	Wheat	cytosol	29.28	41.8
TraesCS5B01G240500.1	Wheat	cytosol	29.73	41.64
PGSC0003DMT400066384	Potato	cytosol	19.14	41.46
TraesCS3B01G141200.1	Wheat	cytosol	29.28	41.27
VIT_03s0063g00810.t01	Wine grape	cytosol	29.05	41.21
KRH50255	Soybean	cytosol	28.15	41.12
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	27.7	41.0
TraesCS5B01G439900.2	Wheat	cytosol	30.63	40.72
GSMUA_Achr7P12950_001	Banana	cytosol	29.5	40.56
TraesCS7B01G077500.1	Wheat	golgi	29.5	40.56
VIT_03s0063g00820.t01	Wine grape	cytosol	27.48	40.53
VIT_03s0063g00740.t01	Wine grape	cytosol	29.28	40.37
TraesCS6B01G046900.1	Wheat	mitochondrion	20.5	39.91
TraesCS5B01G241000.1	Wheat	cytosol	29.05	39.81
TraesCS4B01G135300.1	Wheat	cytosol	28.6	39.56
KRH71164	Soybean	cytosol	27.03	39.47
PGSC0003DMT400066385	Potato	cytosol	27.25	39.41
KRH71163	Soybean	cytosol	26.58	39.07
TraesCS6B01G047900.1	Wheat	cytosol	28.38	38.77
Solyc01g108530.2.1	Tomato	cytosol	26.8	38.76
TraesCS2B01G409800.1	Wheat	cytosol	29.05	38.74
TraesCS5B01G072000.1	Wheat	cytosol, mitochondrion	30.41	38.57
TraesCS5B01G235400.1	Wheat	cytosol	27.93	38.27
Bra040667.1-P	Field mustard	cytosol	27.48	38.24
CDY29339	Canola	cytosol	27.48	38.24
TraesCS5B01G240400.1	Wheat	mitochondrion	29.05	38.17
AT1G49640.1	Thale cress	cytosol	27.03	38.1
AT1G49660.1	Thale cress	cytosol	27.25	37.93
CDY20870	Canola	cytosol	27.25	37.93
PGSC0003DMT400066383	Potato	cytosol	25.9	37.83
CDX77920	Canola	cytosol	26.58	37.82
PGSC0003DMT400091080	Potato	cytosol	26.58	37.82
TraesCS5B01G240000.1	Wheat	cytosol	27.48	37.77
Solyc01g108570.2.1	Tomato	cytosol, extracellular	26.35	37.74
PGSC0003DMT400066392	Potato	cytosol	26.58	37.7
CDY28094	Canola	cytosol	27.25	37.69
CDY51033	Canola	cytosol	27.03	37.5
Bra019558.1-P	Field mustard	cytosol	27.25	37.46
CDY28098	Canola	cytosol	27.03	37.27
PGSC0003DMT400066386	Potato	cytosol	26.13	37.18
CDX68486	Canola	cytosol	27.03	37.15
CDY37916	Canola	cytosol	27.03	37.15
CDX83045	Canola	cytosol	27.03	37.04
TraesCS2B01G381300.1	Wheat	vacuole	32.66	36.9
Solyc01g108580.2.1	Tomato	cytosol	25.9	36.86
Solyc10g050880.1.1	Tomato	cytosol	25.9	36.86
Bra025117.1-P	Field mustard	cytosol	25.23	36.84
Bra018807.1-P	Field mustard	cytosol	27.03	36.81
Bra029913.1-P	Field mustard	cytosol	27.03	36.81
AT3G48690.1	Thale cress	cytosol	26.8	36.73
KRH71162	Soybean	cytosol, nucleus	27.48	36.64
Solyc01g108560.2.1	Tomato	cytosol, plastid	24.77	36.54
KRH50256	Soybean	cytosol	26.13	36.48
PGSC0003DMT400066389	Potato	cytosol	23.87	36.3
Solyc01g108540.2.1	Tomato	cytosol	25.23	36.25
CDY51035	Canola	cytosol	26.58	36.2
Bra018809.1-P	Field mustard	cytosol	25.68	36.08
TraesCS5B01G240200.1	Wheat	endoplasmic reticulum, vacuole	27.93	36.05
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	25.45	35.87
TraesCS5B01G412100.1	Wheat	endoplasmic reticulum	27.03	35.82
AT3G48700.1	Thale cress	cytosol	25.9	34.95
CDY67024	Canola	cytosol	25.23	34.67
AT2G03550.1	Thale cress	cytosol	24.32	34.62
Bra025714.1-P	Field mustard	cytosol	18.47	34.45
KRH71161	Soybean	cytosol	21.17	34.43
TraesCS2B01G335600.1	Wheat	plastid	29.05	34.4
Bra029912.1-P	Field mustard	cytosol	25.0	34.37
CDY41024	Canola	peroxisome	24.77	34.06
KRH50257	Soybean	cytosol	24.77	33.85
TraesCS5B01G240800.1	Wheat	extracellular, golgi	27.7	33.42
PGSC0003DMT400088862	Potato	cytosol	25.45	32.85
CDX96674	Canola	cytosol	23.87	32.62
Bra016519.1-P	Field mustard	cytosol	23.87	32.42
AT1G19190.1	Thale cress	cytosol	23.2	32.39
CDY16521	Canola	mitochondrion	27.7	32.37
Bra014213.1-P	Field mustard	mitochondrion	27.48	32.11
AT1G49650.1	Thale cress	mitochondrion	27.03	32.09
CDY32845	Canola	mitochondrion	26.35	31.97
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	27.03	31.91
Bra018808.1-P	Field mustard	plastid	27.25	31.76
TraesCS5B01G239300.1	Wheat	plastid	27.03	31.58
VIT_03s0063g00770.t01	Wine grape	plastid	29.5	31.49
CDY02986	Canola	cytosol	25.0	31.44
TraesCS5B01G239700.1	Wheat	plastid	28.83	31.3
CDY28095	Canola	plastid	26.58	31.05
CDY51034	Canola	plastid	26.58	31.05
KRH71160	Soybean	nucleus	27.25	30.79
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	30.41	21.92

Protein Annotations

EnsemblPlants:TraesCS1B01G060800.1	EnsemblPlantsGene:TraesCS1B01G060800	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF225	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr1B:+:44799607..44801180

Molecular Weight (calculated)

48277.5 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.101

Length

444 amino acids

Sequence
(BLAST)

001: MHANKSSAVL SKKDAGGEED ITVDLHPFIR EYKGGRVERF LSSSYVEASE DAAANRGVAT KDVVVHESTG VSARLFLPAA AAATGDRLPV ILYVHGGSFC
101: TESAFCRTYH NYVRSLAARA GALVVSVEYR LAPEHPVPAA YDDAWAALQW VASLSDPWLS DHADLGRTFL AGDSAGGNIV YNTAVRAARG GGTGDHIGVE
201: GLVIVHPYFW GVERLSSSEL VWDGVAMFTP ELIDRLWPFV TAGRLDKNDP RVNPLDEEIT SLTCQRMLVA VAEKDTLRDR GRWLAARMRE CCAWADDDEK
301: AVTLVESEGE DHGFHLYNPL RATSKVLMES IVQFINQRTA LPLPAALLPE PYELHACGGM KMDPCCLPIL GVPARPYMDV FGYGMAMKGM TRTSCLHVGQ
401: GRRASKTRYG LSLGHAVGHN KTNKRFSILS ATAAPGTCVS HNFI

Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)

001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA

Arabidopsis Description

CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.