Factsheet for PGSC0003DMT400094975

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1
nucleus 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g054300.1.1	Tomato	cytosol	90.48	76.0
PGSC0003DMT400081446	Potato	cytosol	62.27	51.83
PGSC0003DMT400018674	Potato	cytosol	53.85	45.65
PGSC0003DMT400081450	Potato	cytoskeleton, cytosol, nucleus	54.21	45.12
PGSC0003DMT400081451	Potato	cytosol	53.11	44.34
PGSC0003DMT400077411	Potato	cytosol	53.11	44.21
PGSC0003DMT400081449	Potato	cytosol	30.04	42.27
PGSC0003DMT400018589	Potato	cytosol	37.36	40.32
PGSC0003DMT400066384	Potato	cytosol	28.57	38.05
PGSC0003DMT400081445	Potato	cytosol	44.32	37.93
KRH27615	Soybean	cytosol	38.83	36.68
VIT_05s0020g03010.t01	Wine grape	cytosol	42.12	36.16
PGSC0003DMT400066389	Potato	cytosol	37.0	34.59
KRH77875	Soybean	nucleus	40.29	34.38
PGSC0003DMT400066385	Potato	cytosol	38.1	33.88
KRH35554	Soybean	cytosol	40.66	33.53
KRG91257	Soybean	cytosol, nucleus	39.56	33.44
KRH77873	Soybean	plastid	40.29	33.03
KRH77876	Soybean	cytosol, nucleus	38.46	32.92
KRH35555	Soybean	plastid, vacuole	39.56	31.49
PGSC0003DMT400066386	Potato	cytosol	35.9	31.41
PGSC0003DMT400066392	Potato	cytosol	35.53	30.99
PGSC0003DMT400091080	Potato	cytosol	35.16	30.77
PGSC0003DMT400066383	Potato	cytosol	33.7	30.26
PGSC0003DMT400088862	Potato	cytosol	38.1	30.23
PGSC0003DMT400020612	Potato	cytosol	34.43	29.65
PGSC0003DMT400039929	Potato	cytosol	34.8	29.59

Protein Annotations

EnsemblPlants:PGSC0003DMT400094975	EnsemblPlantsGene:PGSC0003DMG400044546	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF257	PFAM:PF07859	PGSC:PGSC0003DMG400044546	SUPFAM:SSF53474	UniParc:UPI000296426F	UniProt:M1DVA7
MapMan:35.1	:	:	:	:	:

Description

Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400044546]

Coordinates

chr6:-:40632524..40633345

Molecular Weight (calculated)

30505.8 Da

IEP (calculated)

5.317

GRAVY (calculated)

-0.012

Length

273 amino acids

Sequence
(BLAST)

001: MSLLGSIFQK NTTTVNQKLP VLVYNHGGGL VIESPFTNWT HRYVNLLASQ LNAIIISVNY RLAPENDVPT IYNDCWTALQ WVTSHANKDD SVITNTFTNY
101: DPWLKTYGDF DKLFLGGDSA GGNIVFTMTM RAGKESLNCG VGICGSILAF PYFLIENIDQ EGIPYKIWIN ICPSLEQGLS VMDSPMINPL AKNVPSLSVL
201: GCSRLLVCIA EKDEYISGET LIRFVEGVKK SGWNGELKVI ELEEVGHSFQ IYKPECEKAK DMMMHYASFI HNK

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.