CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

plastid 6
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g03010.t01	Wine grape	cytosol	53.35	57.55
KRH77875	Soybean	nucleus	53.64	57.5
Solyc09g075670.1.1	Tomato	cytosol, extracellular	52.48	56.96
PGSC0003DMT400081445	Potato	cytosol	52.48	56.43
KRG91257	Soybean	cytosol, nucleus	53.06	56.35
KRH77876	Soybean	cytosol, nucleus	52.19	56.11
KRH27615	Soybean	cytosol	46.36	55.02
KRH35554	Soybean	cytosol	52.77	54.68
KRH77873	Soybean	plastid	52.19	53.75
KRH71161	Soybean	cytosol	37.9	47.62
KRH50256	Soybean	cytosol	42.27	45.6
KRH71162	Soybean	cytosol, nucleus	44.02	45.35
PGSC0003DMT400081451	Potato	cytosol	42.57	44.65
Solyc05g051660.1.1	Tomato	cytosol	41.69	44.41
PGSC0003DMT400081450	Potato	cytoskeleton, cytosol, nucleus	42.27	44.21
PGSC0003DMT400018674	Potato	cytosol	41.11	43.79
PGSC0003DMT400077411	Potato	cytosol	41.69	43.6
KRH50255	Soybean	cytosol	38.48	43.42
KRH05704	Soybean	cytosol	42.57	43.32
KRH71164	Soybean	cytosol	38.19	43.09
KRH50257	Soybean	cytosol	40.52	42.77
Solyc09g075710.1.1	Tomato	cytoskeleton, cytosol, nucleus	40.52	42.51
KRH71163	Soybean	cytosol	37.32	42.38
Solyc09g075700.1.1	Tomato	cytosol	40.52	42.38
Solyc04g005230.2.1	Tomato	cytosol	39.07	42.27
Solyc06g054300.1.1	Tomato	cytosol	39.65	41.85
PGSC0003DMT400081449	Potato	cytosol	23.62	41.75
PGSC0003DMT400018589	Potato	cytosol	30.61	41.5
Solyc09g075680.1.1	Tomato	cytosol	39.65	41.21
PGSC0003DMT400081446	Potato	cytosol	39.36	41.16
KRH51960	Soybean	cytosol	38.19	40.18
Solyc05g051670.1.1	Tomato	cytosol	33.24	40.14
Solyc09g075690.1.1	Tomato	cytosol	38.48	40.12
PGSC0003DMT400094975	Potato	cytosol, extracellular, plastid	31.49	39.56
KRH61262	Soybean	cytosol	36.15	39.37
KRH71160	Soybean	nucleus	42.57	37.15

Protein Annotations

EntrezGene:100785409	Gene3D:3.40.50.1820	MapMan:9.2.2.8.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	EMBL:ACUP02006689
EMBL:BT095703	UniProt:C6TDP1	EnsemblPlantsGene:GLYMA_10G250300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	InterPro:IPR029058	EnsemblPlants:KRH35555	ProteinID:KRH35555
ProteinID:KRH35555.1	InterPro:Lipase_GDXG_HIS_AS	PFAM:PF07859	ScanProsite:PS01173	PANTHER:PTHR23024	PANTHER:PTHR23024:SF193
MEROPS:S09.A09	SUPFAM:SSF53474	UniParc:UPI0001B167F6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:47841780..47843423

Molecular Weight (calculated)

37914.0 Da

IEP (calculated)

5.079

GRAVY (calculated)

0.013

Length

343 amino acids

Sequence
(BLAST)

001: MSSSAFIPNT ISLSLFLSAS FNSMASKEIA RELPPLLRVY NDGTVERFLG SPHVPPSLLD PETLVSSKDI VISENPSISA RVYLPPKLNN SHQQKLPIFV
101: YFHGGAFCLE SAFSFLHHRY LNLIASEAKV LVVSVEYRLA PENPLPAAYE DSWEALKWVT SHFNSNKSEP WLVEHGDFNR FYIGGDTAGA NVAHNAVLRV
201: GVESETLWGV KIAGVVLAFP LFWSSEPVLS EMVEGFEESS AMQVWKFVYP DAPGGIDNPL INPLASGAPS LASLGCHKVL IFVAGKDDLR DRGIWYYDAV
301: KKSGWEGDVE LVRVEGEEHC FQIYHPETEN SKGVISRIAS FLV

Best Arabidopsis Sequence Match ( AT3G48690.1 )
(BLAST)

001: MDSEIAVDCS PLLKIYKSGR IERLMGEATV PPSSEPQNGV VSKDVVYSAD NNLSVRIYLP EKAAAETDSK LPLLVYFHGG GFIIETAFSP TYHTFLTTSV
101: SASNCVAVSV DYRRAPEHPI SVPFDDSWTA LKWVFTHITG SGQEDWLNKH ADFSRVFLSG DSAGANIVHH MAMRAAKEKL SPGLNDTGIS GIILLHPYFW
201: SKTPIDEKDT KDETLRMKIE AFWMMASPNS KDGTDDPLLN VVQSESVDLS GLGCGKVLVM VAEKDALVRQ GWGYAAKLEK SGWKGEVEVV ESEGEDHVFH
301: LLKPECDNAI EVMHKFSGFI KGGN

Arabidopsis Description

CXE12Probable carboxylesterase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMN0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.