Factsheet for HORVU7Hr1G027350.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G010280.1
HORVU1Hr1G041480.1
HORVU1Hr1G041490.1
HORVU2Hr1G005650.6
HORVU2Hr1G013450.3
HORVU2Hr1G028530.3
HORVU3Hr1G039040.6
HORVU4Hr1G051720.1
HORVU5Hr1G011280.4
HORVU5Hr1G059250.1
HORVU7Hr1G036210.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19080.1	HORVU0Hr1G010280.1	AT2G02560.1	21798944
AT2G19080.1	HORVU1Hr1G041480.1	AT2G02560.1	21798944
AT2G19080.1	HORVU1Hr1G041490.1	AT2G02560.1	21798944
AT2G19080.1	HORVU2Hr1G005650.6	AT2G02560.1	21798944
AT2G19080.1	HORVU5Hr1G011280.4	AT2G02560.1	21798944
AT2G19080.1	HORVU5Hr1G059250.1	AT2G02560.1	21798944
AT2G19080.1	HORVU7Hr1G036210.1	AT2G02560.1	21798944
AT2G19080.1	HORVU3Hr1G039040.6	AT3G20000.1	17981999
AT2G19080.1	HORVU4Hr1G051720.1	AT3G20000.1	17981999
AT2G19080.1	HORVU2Hr1G013450.3	AT3G47640.1	21798944
AT2G19080.1	HORVU2Hr1G028530.3	AT3G47640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G030900.1	Wheat	plastid	82.33	77.45
TraesCS7A01G130600.1	Wheat	plastid	81.7	76.85
TraesCS7D01G130000.1	Wheat	plastid	81.7	74.64
Os06t0168000-01	Rice	cytosol, peroxisome	69.09	63.29
OQU75905	Sorghum	cytosol, plastid	65.3	61.42
GSMUA_Achr1P15670_001	Banana	cytosol	52.05	54.82
Zm00001d045193_P002	Maize	mitochondrion	63.72	54.74
PGSC0003DMT400021961	Potato	cytosol	48.58	47.24
VIT_11s0103g00300.t01	Wine grape	cytosol	47.95	46.63
Solyc07g009320.2.1	Tomato	cytosol, nucleus, plastid	47.95	46.63
AT2G19080.1	Thale cress	cytosol, peroxisome, plasma membrane	42.27	42.54
CDX82614	Canola	cytosol	41.64	42.04
KRH37302	Soybean	cytosol	43.22	41.64
CDY39135	Canola	cytosol	41.32	41.59
CDY03366	Canola	cytosol, golgi, peroxisome	41.01	41.4
Bra038562.1-P	Field mustard	cytosol	40.69	41.08
CDY66507	Canola	cytosol	40.69	41.08
KRH12285	Soybean	cytosol	42.27	40.85
KRH02821	Soybean	mitochondrion	41.32	40.81
KRH19062	Soybean	cytosol, nucleus, plasma membrane	40.06	39.69
Bra038838.1-P	Field mustard	cytosol	28.08	38.53

Protein Annotations

MapMan:23.2.2.2	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005741	GO:GO:0005743	GO:GO:0006626	GO:GO:0006810	GO:GO:0008150
GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	InterPro:Glutathione-S-Trfase_C_sf
EnsemblPlantsGene:HORVU7Hr1G027350	EnsemblPlants:HORVU7Hr1G027350.3	UniProt:M0XIL4	InterPro:Metaxin_GST	PFAM:PF17171	PFAM:PF17172
PANTHER:PTHR12289	PANTHER:PTHR12289:SF41	SUPFAM:SSF47616	TMHMM:TMhelix	InterPro:Thioredoxin-like_fold	UniParc:UPI000294853F
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:48402344..48406262

Molecular Weight (calculated)

35856.5 Da

IEP (calculated)

4.815

GRAVY (calculated)

-0.211

Length

317 amino acids

Sequence
(BLAST)

001: MSYRYALYNS IYRLEILFSL YSLLSIYTAL PLLHLGLYST DHIPYVEFGE CVAFNNENGG VIEYLREEKI VDLTSKHPSV SYSDVLPTKA MISTWLADAL
101: QYELWVANDG AHWSIARDIY FSDLPWPIGK VLYWKKIREV KQLLDITKLN AAEKEEEIYR KATAAYDALS TKLGDQSFLF DDSPTDVDAL LLGHVLFVLN
201: ALPATSMLRS YLQNYDNLVK LAEDIKVQLV GVDSSAAGSA SSDPPSSSTP RKTASSGQSY KPKPKAKKER TEEEKKFRRR TKYFLAAQLI SVLVFLSIMG
301: GVDSSELDDD YELEYED

Best Arabidopsis Sequence Match ( AT2G19080.1 )
(BLAST)

001: MEGDQETNVY TLVARKPSFD LPTACPNCLP AYIYLKLAQL PFELAFNSTF PDSDELPYFE SDTYVAYNNE DGGVIEKLKK DGIVNLDSQL QSLSDYLSLK
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD

Arabidopsis Description

MTX1Mitochondrial outer membrane import complex protein METAXIN [Source:UniProtKB/Swiss-Prot;Acc:O64471]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.