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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03366 Canola cytosol, golgi, peroxisome 85.71 85.99
CDY66507 Canola cytosol 85.71 85.99
Bra038562.1-P Field mustard cytosol 85.71 85.99
CDX82614 Canola cytosol 83.17 83.44
CDY39135 Canola cytosol 80.63 80.63
Bra038838.1-P Field mustard cytosol 57.14 77.92
VIT_11s0103g00300.t01 Wine grape cytosol 59.68 57.67
Solyc07g009320.2.1 Tomato cytosol, nucleus, plastid 57.14 55.21
PGSC0003DMT400021961 Potato cytosol 57.14 55.21
KRH19062 Soybean cytosol, nucleus, plasma membrane 52.06 51.25
KRH02821 Soybean mitochondrion 50.79 49.84
KRH12285 Soybean cytosol 50.79 48.78
KRH37302 Soybean cytosol 50.48 48.33
TraesCS7B01G030900.1 Wheat plastid 49.21 45.99
TraesCS7A01G130600.1 Wheat plastid 48.57 45.4
OQU75905 Sorghum cytosol, plastid 48.25 45.1
Os06t0168000-01 Rice cytosol, peroxisome 48.25 43.93
TraesCS7D01G130000.1 Wheat plastid 48.25 43.8
GSMUA_Achr1P15670_001 Banana cytosol 40.95 42.86
HORVU7Hr1G027350.3 Barley endoplasmic reticulum, plasma membrane 42.54 42.27
Zm00001d045193_P002 Maize mitochondrion 48.57 41.46
Protein Annotations
MapMan:23.2.2.2EntrezGene:816425UniProt:A0A178VY14ProteinID:AAD12026.1ProteinID:AEC06846.1ArrayExpress:AT2G19080
EnsemblPlantsGene:AT2G19080RefSeq:AT2G19080TAIR:AT2G19080RefSeq:AT2G19080-TAIR-GEnsemblPlants:AT2G19080.1TAIR:AT2G19080.1
EMBL:AY070737EMBL:AY087648EMBL:AY142046GO:GO:0001401GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005741GO:GO:0005743GO:GO:0006626GO:GO:0006810GO:GO:0008150GO:GO:0009536
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043InterPro:Glutathione-S-Trfase_C_sfInterPro:Metaxin
InterPro:Metaxin_GSTRefSeq:NP_565446.1UniProt:O64471ProteinID:OAP09943.1PFAM:PF17171PFAM:PF17172
PIRSF:PIRSF038150PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0005052PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PANTHER:PTHR12289PANTHER:PTHR12289:SF41SUPFAM:SSF47616TMHMM:TMhelix
InterPro:Thioredoxin-like_foldUniParc:UPI00000A4A1FSEG:seg:::
Description
MTX1Mitochondrial outer membrane import complex protein METAXIN [Source:UniProtKB/Swiss-Prot;Acc:O64471]
Coordinates
chr2:+:8262700..8265138
Molecular Weight (calculated)
35855.5 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.337
Length
315 amino acids
Sequence
(BLAST)
001: MEGDQETNVY TLVARKPSFD LPTACPNCLP AYIYLKLAQL PFELAFNSTF PDSDELPYFE SDTYVAYNNE DGGVIEKLKK DGIVNLDSQL QSLSDYLSLK
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.