Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY03366 | Canola | cytosol, golgi, peroxisome | 85.71 | 85.99 |
CDY66507 | Canola | cytosol | 85.71 | 85.99 |
Bra038562.1-P | Field mustard | cytosol | 85.71 | 85.99 |
CDX82614 | Canola | cytosol | 83.17 | 83.44 |
CDY39135 | Canola | cytosol | 80.63 | 80.63 |
Bra038838.1-P | Field mustard | cytosol | 57.14 | 77.92 |
VIT_11s0103g00300.t01 | Wine grape | cytosol | 59.68 | 57.67 |
Solyc07g009320.2.1 | Tomato | cytosol, nucleus, plastid | 57.14 | 55.21 |
PGSC0003DMT400021961 | Potato | cytosol | 57.14 | 55.21 |
KRH19062 | Soybean | cytosol, nucleus, plasma membrane | 52.06 | 51.25 |
KRH02821 | Soybean | mitochondrion | 50.79 | 49.84 |
KRH12285 | Soybean | cytosol | 50.79 | 48.78 |
KRH37302 | Soybean | cytosol | 50.48 | 48.33 |
TraesCS7B01G030900.1 | Wheat | plastid | 49.21 | 45.99 |
TraesCS7A01G130600.1 | Wheat | plastid | 48.57 | 45.4 |
OQU75905 | Sorghum | cytosol, plastid | 48.25 | 45.1 |
Os06t0168000-01 | Rice | cytosol, peroxisome | 48.25 | 43.93 |
TraesCS7D01G130000.1 | Wheat | plastid | 48.25 | 43.8 |
GSMUA_Achr1P15670_001 | Banana | cytosol | 40.95 | 42.86 |
HORVU7Hr1G027350.3 | Barley | endoplasmic reticulum, plasma membrane | 42.54 | 42.27 |
Zm00001d045193_P002 | Maize | mitochondrion | 48.57 | 41.46 |
Protein Annotations
MapMan:23.2.2.2 | EntrezGene:816425 | UniProt:A0A178VY14 | ProteinID:AAD12026.1 | ProteinID:AEC06846.1 | ArrayExpress:AT2G19080 |
EnsemblPlantsGene:AT2G19080 | RefSeq:AT2G19080 | TAIR:AT2G19080 | RefSeq:AT2G19080-TAIR-G | EnsemblPlants:AT2G19080.1 | TAIR:AT2G19080.1 |
EMBL:AY070737 | EMBL:AY087648 | EMBL:AY142046 | GO:GO:0001401 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
GO:GO:0005741 | GO:GO:0005743 | GO:GO:0006626 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009536 |
GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Metaxin |
InterPro:Metaxin_GST | RefSeq:NP_565446.1 | UniProt:O64471 | ProteinID:OAP09943.1 | PFAM:PF17171 | PFAM:PF17172 |
PIRSF:PIRSF038150 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12289 | PANTHER:PTHR12289:SF41 | SUPFAM:SSF47616 | TMHMM:TMhelix |
InterPro:Thioredoxin-like_fold | UniParc:UPI00000A4A1F | SEG:seg | : | : | : |
Description
MTX1Mitochondrial outer membrane import complex protein METAXIN [Source:UniProtKB/Swiss-Prot;Acc:O64471]
Coordinates
chr2:+:8262700..8265138
Molecular Weight (calculated)
35855.5 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.337
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDQETNVY TLVARKPSFD LPTACPNCLP AYIYLKLAQL PFELAFNSTF PDSDELPYFE SDTYVAYNNE DGGVIEKLKK DGIVNLDSQL QSLSDYLSLK
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.