Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- mitochondrion 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G030900.1 | Wheat | plastid | 95.1 | 97.92 |
| TraesCS7A01G130600.1 | Wheat | plastid | 94.24 | 97.03 |
| HORVU7Hr1G027350.3 | Barley | endoplasmic reticulum, plasma membrane | 74.64 | 81.7 |
| OQU75905 | Sorghum | cytosol, plastid | 71.47 | 73.59 |
| Os06t0168000-01 | Rice | cytosol, peroxisome | 72.62 | 72.83 |
| Zm00001d045193_P002 | Maize | mitochondrion | 70.61 | 66.4 |
| GSMUA_Achr1P15670_001 | Banana | cytosol | 46.97 | 54.15 |
| VIT_11s0103g00300.t01 | Wine grape | cytosol | 49.57 | 52.76 |
| PGSC0003DMT400021961 | Potato | cytosol | 49.28 | 52.45 |
| Solyc07g009320.2.1 | Tomato | cytosol, nucleus, plastid | 48.99 | 52.15 |
| AT2G19080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 43.8 | 48.25 |
| CDX82614 | Canola | cytosol | 43.52 | 48.09 |
| CDY39135 | Canola | cytosol | 43.23 | 47.62 |
| Bra038562.1-P | Field mustard | cytosol | 42.94 | 47.45 |
| CDY66507 | Canola | cytosol | 42.94 | 47.45 |
| CDY03366 | Canola | cytosol, golgi, peroxisome | 42.65 | 47.13 |
| KRH37302 | Soybean | cytosol | 44.67 | 47.11 |
| KRH12285 | Soybean | cytosol | 43.8 | 46.34 |
| Bra038838.1-P | Field mustard | cytosol | 30.84 | 46.32 |
| KRH02821 | Soybean | mitochondrion | 41.5 | 44.86 |
| KRH19062 | Soybean | cytosol, nucleus, plasma membrane | 41.21 | 44.69 |
Protein Annotations
| MapMan:23.2.2.2 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005741 | GO:GO:0005743 | GO:GO:0006626 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | InterPro:Metaxin | InterPro:Metaxin_GST |
| PFAM:PF17171 | PFAM:PF17172 | PIRSF:PIRSF038150 | PANTHER:PTHR12289 | PANTHER:PTHR12289:SF41 | TMHMM:TMhelix |
| InterPro:Thioredoxin-like_fold | EnsemblPlantsGene:TraesCS7D01G130000 | EnsemblPlants:TraesCS7D01G130000.1 | TIGR:cd03054 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:+:82294049..82298880
Molecular Weight (calculated)
38699.8 Da
IEP (calculated)
5.028
GRAVY (calculated)
-0.249
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MASATTAAAE WEAAARKTLV ARKPGFGLPT ACPTCLPVLL YLRMSQVPFD IHVDYRFPDA DHIPYVEFGE CVAFNNENGG VIEYLREEKI VDLTSKHPSV
101: SYSDVLSTKA MISTWLADAL QYELWVANDG AHGSIARDIY FSDLPWPIGK VLHWKKIRDV KRLMDITKLN AAEKEEEIYR KATAAYDALS TKLGDQSFLF
201: DDRTLTILYF EFCSPTDADA LLLGHVLFVL NALPATSMLR SYLQNYDNLV KYAEDIKVQL VEVGSSSAGS ASSDMPSSST PRKTSSSGQS YKPKPKAKER
301: TEEEKKSRRR TKYFLAAQLI SVLAFLSITG GVDSSALDDD YDMDYED
101: SYSDVLSTKA MISTWLADAL QYELWVANDG AHGSIARDIY FSDLPWPIGK VLHWKKIRDV KRLMDITKLN AAEKEEEIYR KATAAYDALS TKLGDQSFLF
201: DDRTLTILYF EFCSPTDADA LLLGHVLFVL NALPATSMLR SYLQNYDNLV KYAEDIKVQL VEVGSSSAGS ASSDMPSSST PRKTSSSGQS YKPKPKAKER
301: TEEEKKSRRR TKYFLAAQLI SVLAFLSITG GVDSSALDDD YDMDYED
001: MEGDQETNVY TLVARKPSFD LPTACPNCLP AYIYLKLAQL PFELAFNSTF PDSDELPYFE SDTYVAYNNE DGGVIEKLKK DGIVNLDSQL QSLSDYLSLK
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD
Arabidopsis Description
MTX1Mitochondrial outer membrane import complex protein METAXIN [Source:UniProtKB/Swiss-Prot;Acc:O64471]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.