Factsheet for Zm00001d045193_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008242_P001
Zm00001d022225_P001
Zm00001d027974_P002
Zm00001d028971_P001
Zm00001d029339_P001
Zm00001d040440_P001
Zm00001d046662_P001
Zm00001d047566_P008
Zm00001d048901_P002
Zm00001d049167_P001
Zm00001d050298_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19080.1	Zm00001d027974_P002	AT2G02560.1	21798944
AT2G19080.1	Zm00001d046662_P001	AT2G02560.1	21798944
AT2G19080.1	Zm00001d049167_P001	AT2G02560.1	21798944
AT2G19080.1	Zm00001d050298_P001	AT2G02560.1	21798944
AT2G19080.1	Zm00001d008242_P001	AT3G20000.1	17981999
AT2G19080.1	Zm00001d028971_P001	AT3G20000.1	17981999
AT2G19080.1	Zm00001d040440_P001	AT3G20000.1	17981999
AT2G19080.1	Zm00001d047566_P008	AT3G20000.1	17981999
AT2G19080.1	Zm00001d022225_P001	AT3G47640.1	21798944
AT2G19080.1	Zm00001d029339_P001	AT3G47640.1	21798944
AT2G19080.1	Zm00001d048901_P002	AT3G47640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU75905	Sorghum	cytosol, plastid	83.47	91.39
Os06t0168000-01	Rice	cytosol, peroxisome	72.63	77.46
TraesCS7B01G030900.1	Wheat	plastid	65.85	72.11
TraesCS7A01G130600.1	Wheat	plastid	65.31	71.51
TraesCS7D01G130000.1	Wheat	plastid	66.4	70.61
HORVU7Hr1G027350.3	Barley	endoplasmic reticulum, plasma membrane	54.74	63.72
VIT_11s0103g00300.t01	Wine grape	cytosol	49.86	56.44
Solyc07g009320.2.1	Tomato	cytosol, nucleus, plastid	49.05	55.52
PGSC0003DMT400021961	Potato	cytosol	49.05	55.52
GSMUA_Achr1P15670_001	Banana	cytosol	45.26	55.48
Bra038838.1-P	Field mustard	cytosol	31.71	50.65
CDY39135	Canola	cytosol	42.28	49.52
CDX82614	Canola	cytosol	42.01	49.36
AT2G19080.1	Thale cress	cytosol, peroxisome, plasma membrane	41.46	48.57
Bra038562.1-P	Field mustard	cytosol	40.92	48.09
CDY03366	Canola	cytosol, golgi, peroxisome	40.92	48.09
KRH19062	Soybean	cytosol, nucleus, plasma membrane	41.46	47.81
CDY66507	Canola	cytosol	40.65	47.77
KRH02821	Soybean	mitochondrion	40.92	47.04
KRH12285	Soybean	cytosol	41.46	46.65
KRH37302	Soybean	cytosol	41.46	46.5

Protein Annotations

MapMan:23.2.2.2	UniProt:A0A1D6NUF5	ProteinID:AQL01786.1	GO:GO:0001401	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0005743	GO:GO:0006626
GO:GO:0006810	GO:GO:0008150	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	InterPro:Metaxin	InterPro:Metaxin_GST	PFAM:PF17171	PFAM:PF17172	PIRSF:PIRSF038150
PANTHER:PTHR12289	PANTHER:PTHR12289:SF41	TMHMM:TMhelix	InterPro:Thioredoxin-like_fold	UniParc:UPI000843F837	EnsemblPlantsGene:Zm00001d045193
EnsemblPlants:Zm00001d045193_P002	EnsemblPlants:Zm00001d045193_T002	SEG:seg	:	:	:

Description

Mitochondrial outer membrane import complex protein METAXIN

Coordinates

chr9:-:15736908..15740322

Molecular Weight (calculated)

40956.7 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.180

Length

369 amino acids

Sequence
(BLAST)

001: MNRKEPLCAR QTPTQLTSAM ASAAAVEWEA AARKVLVARK PCFGLPTACP TCLPVLLYLR MAQVPFDIHV DTSFPDADHI PYVEFGDCVA FNNEKGGVIE
101: YLKDEKIADL NSNHPNISST TVLDTKAMVS SWLANALLYE LWVVSAGSIA NDIYFSDLPW PIGKILHWNK TRHVKQLLGI TKLNAAEKEE EIYLKASAAY
201: DSLSFRLGDQ VFLFDNRYTS INLYPAYFSV LCVSPTDVDA LFLGHALFVL SALPDTSVLR GTLQKHDNLV SFAEHHKVQL LETSSSSSSG LGSSPSPSSS
301: TPRRRPSADH SYKPKPRAKK ERTEEEKKFR RRAKYFLATQ LVAVLVFLSL MGGVDSSELD DEDGLDYDD

Best Arabidopsis Sequence Match ( AT2G19080.1 )
(BLAST)

001: MEGDQETNVY TLVARKPSFD LPTACPNCLP AYIYLKLAQL PFELAFNSTF PDSDELPYFE SDTYVAYNNE DGGVIEKLKK DGIVNLDSQL QSLSDYLSLK
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD

Arabidopsis Description

MTX1Mitochondrial outer membrane import complex protein METAXIN [Source:UniProtKB/Swiss-Prot;Acc:O64471]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.