Factsheet for Bra038838.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019509.1-P
Bra024815.1-P
Bra026586.1-P
Bra033788.1-P
Bra035826.1-P
Bra038249.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19080.1	Bra024815.1-P	AT2G02560.1	21798944
AT2G19080.1	Bra026586.1-P	AT2G02560.1	21798944
AT2G19080.1	Bra035826.1-P	AT3G20000.1	17981999
AT2G19080.1	Bra038249.1-P	AT3G20000.1	17981999
AT2G19080.1	Bra019509.1-P	AT3G47640.1	21798944
AT2G19080.1	Bra033788.1-P	AT3G47640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39135	Canola	cytosol	99.57	73.02
Bra038562.1-P	Field mustard	cytosol	80.09	58.92
AT2G19080.1	Thale cress	cytosol, peroxisome, plasma membrane	77.92	57.14
VIT_11s0103g00300.t01	Wine grape	cytosol	57.58	40.8
PGSC0003DMT400021961	Potato	cytosol	56.71	40.18
Solyc07g009320.2.1	Tomato	cytosol, nucleus, plastid	56.28	39.88
KRH19062	Soybean	cytosol, nucleus, plasma membrane	51.08	36.88
KRH02821	Soybean	mitochondrion	49.35	35.51
KRH12285	Soybean	cytosol	49.35	34.76
KRH37302	Soybean	cytosol	49.35	34.65
OQU75905	Sorghum	cytosol, plastid	50.22	34.42
TraesCS7A01G130600.1	Wheat	plastid	47.62	32.64
TraesCS7B01G030900.1	Wheat	plastid	47.19	32.34
Zm00001d045193_P002	Maize	mitochondrion	50.65	31.71
Os06t0168000-01	Rice	cytosol, peroxisome	46.75	31.21
TraesCS7D01G130000.1	Wheat	plastid	46.32	30.84
GSMUA_Achr1P15670_001	Banana	cytosol	38.96	29.9
HORVU7Hr1G027350.3	Barley	endoplasmic reticulum, plasma membrane	38.53	28.08

Protein Annotations

EnsemblPlants:Bra038838.1	EnsemblPlants:Bra038838.1-P	EnsemblPlantsGene:Bra038838	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Thioredoxin-like_fold	PANTHER:PTHR12289	PANTHER:PTHR12289:SF41	PFAM:PF17172	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002541086	UniProt:M4FCL9	MapMan:23.2.2.2	:	:	:

Description

AT2G19080 (E=4e-036) | metaxin-related

Coordinates

chrA07:-:1134034..1135562

Molecular Weight (calculated)

26270.3 Da

IEP (calculated)

7.334

GRAVY (calculated)

-0.496

Length

231 amino acids

Sequence
(BLAST)

001: MEGDQDTSGG FTLVTRKPCF GLPTACPNCL PAYIYLKLAQ LPFQLAFNST FPDSDELPYF ETGTYVAYNN EEGGVIEKLK KDGGVSAWKI YYSDLPWVIS
101: KVLFYKQTYM AKTRLGIIKE NSEEREKQET SVLRTKLLEH GNLVRYAEKL KLEFLEAPSS SWSPPLHSFP SSFSRKGSKP KSKSKTEKTE EEKKFKKRAK
201: FFLAAQFLAV VIYLSVMGGV SNDELEYEDD E

Best Arabidopsis Sequence Match ( AT2G19080.1 )
(BLAST)

001: MEGDQETNVY TLVARKPSFD LPTACPNCLP AYIYLKLAQL PFELAFNSTF PDSDELPYFE SDTYVAYNNE DGGVIEKLKK DGIVNLDSQL QSLSDYLSLK
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD

Arabidopsis Description

MTX1Mitochondrial outer membrane import complex protein METAXIN [Source:UniProtKB/Swiss-Prot;Acc:O64471]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.