Factsheet for Os06t0168000-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
peroxisome 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0276200-00
Os02t0167700-01
Os02t0169800-01
Os03t0323800-01
Os03t0379300-01
Os07t0628500-01
Os08t0494375-00
Os11t0601700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19080.1	Os02t0167700-01	AT2G02560.1	21798944
AT2G19080.1	Os02t0169800-01	AT2G02560.1	21798944
AT2G19080.1	Os01t0276200-00	AT3G20000.1	17981999
AT2G19080.1	Os03t0323800-01	AT3G20000.1	17981999
AT2G19080.1	Os03t0379300-01	AT3G47640.1	21798944
AT2G19080.1	Os07t0628500-01	AT3G47640.1	21798944
AT2G19080.1	Os08t0494375-00	AT3G47640.1	21798944
AT2G19080.1	Os11t0601700-01	AT3G47640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU75905	Sorghum	cytosol, plastid	79.48	81.6
TraesCS7A01G130600.1	Wheat	plastid	73.12	75.07
TraesCS7B01G030900.1	Wheat	plastid	72.83	74.78
Zm00001d045193_P002	Maize	mitochondrion	77.46	72.63
TraesCS7D01G130000.1	Wheat	plastid	72.83	72.62
HORVU7Hr1G027350.3	Barley	endoplasmic reticulum, plasma membrane	63.29	69.09
Solyc07g009320.2.1	Tomato	cytosol, nucleus, plastid	53.18	56.44
PGSC0003DMT400021961	Potato	cytosol	53.18	56.44
GSMUA_Achr1P15670_001	Banana	cytosol	48.84	56.15
VIT_11s0103g00300.t01	Wine grape	cytosol	52.02	55.21
AT2G19080.1	Thale cress	cytosol, peroxisome, plasma membrane	43.93	48.25
CDY39135	Canola	cytosol	43.64	47.94
CDX82614	Canola	cytosol	43.35	47.77
KRH19062	Soybean	cytosol, nucleus, plasma membrane	43.93	47.5
KRH12285	Soybean	cytosol	44.8	47.26
CDY03366	Canola	cytosol, golgi, peroxisome	42.77	47.13
KRH37302	Soybean	cytosol	44.8	47.11
Bra038562.1-P	Field mustard	cytosol	42.49	46.82
Bra038838.1-P	Field mustard	cytosol	31.21	46.75
KRH02821	Soybean	mitochondrion	43.35	46.73
CDY66507	Canola	cytosol	42.2	46.5

Protein Annotations

MapMan:23.2.2.2	UniProt:A0A0N7KLL5	ProteinID:BAS96353.1	ncoils:Coil	GO:GO:0001401	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0005743
GO:GO:0006626	GO:GO:0006810	GO:GO:0008150	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Metaxin	InterPro:Metaxin_GST	EnsemblPlantsGene:Os06g0168000
EnsemblPlants:Os06t0168000-01	PFAM:PF17171	PFAM:PF17172	PIRSF:PIRSF038150	PANTHER:PTHR12289	PANTHER:PTHR12289:SF41
SUPFAM:SSF47616	InterPro:Thioredoxin-like_fold	UniParc:UPI000393AD8D	SEG:seg	:	:

Description

Glutathione S-transferase, C-terminal-like domain containing protein. (Os06t0168000-01)

Coordinates

chr6:+:3428704..3433378

Molecular Weight (calculated)

38428.5 Da

IEP (calculated)

4.959

GRAVY (calculated)

-0.285

Length

346 amino acids

Sequence
(BLAST)

001: SKESSPLPAM ASAAAAAAAE WEEAERKVLV ARKAAFGLPT ACPTCLPVLL YLRMCNVPFD IHVDSSFPDA DHIPYVEFGE CVAFNNEKGG VIEYLKEEKI
101: VDLNSKHPSV SYSDVLSTKA MVMTWLSDAL QYELWLASDG SIPHDIYFSD LSWPIGKILY WKKTREVKQQ LGITKLNAAE KEEEIYQKAN AAYDALSTRL
201: GDQIFLFDNS PTDVDALFLG HALFVLNVLP DTSVLRSCLQ KYDNLVNFTK HLKVQLLEAD SDSSATGLGS TDPSSSSTPR KRASSGRSYK PKPRAKKERT
301: EEEKKFRRKA KYFLATQLVA VLLFLSLMGG ADSSELDDED GVDYED

Best Arabidopsis Sequence Match ( AT2G19080.1 )
(BLAST)

001: MEGDQETNVY TLVARKPSFD LPTACPNCLP AYIYLKLAQL PFELAFNSTF PDSDELPYFE SDTYVAYNNE DGGVIEKLKK DGIVNLDSQL QSLSDYLSLK
101: ALIVSWLEEA LTYEIWVGTE GISTSKIYYS DLPWVISKVL FYKQTYLAKN RLGITKENAE QREKQIYKRA SEAYEALSTR LGEQKFLFED RPSSLDAFLL
201: SHILFIIQAL PVTSVLRCKL LEHSNLVRYA EKLKSEFLEA SSSSPSPPLH SFPSSFPRKS SKPKSKPKVE KTEEEKKFKK RARFFLAAQF LAVVIYVSVM
301: GGGSSDELEY EDEDD

Arabidopsis Description

MTX1Mitochondrial outer membrane import complex protein METAXIN [Source:UniProtKB/Swiss-Prot;Acc:O64471]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.