Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012976.1-P | Field mustard | cytosol, mitochondrion | 89.66 | 89.14 |
| CDY02163 | Canola | cytosol, mitochondrion | 89.66 | 89.14 |
| CDY23077 | Canola | cytosol | 89.66 | 88.64 |
| CDX87205 | Canola | cytosol, mitochondrion | 82.76 | 77.42 |
| CDY16818 | Canola | cytosol, mitochondrion | 83.33 | 76.72 |
| AT5G07840.1 | Thale cress | cytosol | 76.44 | 76.0 |
| PGSC0003DMT400075540 | Potato | cytosol, mitochondrion | 55.17 | 63.16 |
| KRH39707 | Soybean | cytosol | 62.07 | 62.79 |
| KRH76405 | Soybean | cytosol | 62.07 | 62.79 |
| EES06098 | Sorghum | cytosol, mitochondrion | 59.2 | 62.42 |
| Zm00001d014925_P001 | Maize | mitochondrion | 59.2 | 62.05 |
| VIT_02s0087g00100.t01 | Wine grape | cytosol | 60.92 | 60.92 |
| Os02t0102600-01 | Rice | cytosol, mitochondrion | 58.05 | 60.84 |
| HORVU6Hr1G001980.1 | Barley | mitochondrion | 58.05 | 60.48 |
| TraesCS6D01G006600.1 | Wheat | cytosol | 58.05 | 60.12 |
| TraesCS6A01G004600.1 | Wheat | mitochondrion | 58.05 | 59.76 |
| TraesCS6B01G009600.1 | Wheat | mitochondrion | 58.05 | 59.76 |
| Solyc08g005910.2.1 | Tomato | cytosol | 57.47 | 59.17 |
| GSMUA_Achr9P23190_001 | Banana | cytosol | 58.05 | 58.72 |
| Solyc12g096260.1.1 | Tomato | cytosol | 43.1 | 58.59 |
| PGSC0003DMT400011414 | Potato | cytosol | 56.9 | 58.58 |
| TraesCS2B01G597300.1 | Wheat | cytosol | 56.32 | 58.33 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:836244 | UniProt:A0A178UBU8 | ProteinID:AED97439.1 | ArrayExpress:AT5G61230 |
| EnsemblPlantsGene:AT5G61230 | RefSeq:AT5G61230 | TAIR:AT5G61230 | RefSeq:AT5G61230-TAIR-G | EnsemblPlants:AT5G61230.1 | TAIR:AT5G61230.1 |
| EMBL:AY039615 | EMBL:AY078023 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | Unigene:At.22973 |
| ProteinID:BAB10384.1 | GO:GO:0000003 | GO:GO:0000151 | GO:GO:0001933 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009553 | GO:GO:0009567 | GO:GO:0009628 | GO:GO:0009644 |
| GO:GO:0009744 | GO:GO:0009987 | GO:GO:0010218 | GO:GO:0010313 | GO:GO:0016043 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031542 | GO:GO:0031625 | GO:GO:0080173 | InterPro:IPR002110 |
| InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_200931.1 | ProteinID:OAO91253.1 | PFAM:PF12796 | PO:PO:0000084 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025074 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR01415 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR45189 | UniProt:Q9FNP4 | SMART:SM00248 |
| SUPFAM:SSF48403 | UniParc:UPI00000A8B7C | SEG:seg | : | : | : |
Description
PIA2Phytochrome-interacting ankyrin-repeat protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP4]
Coordinates
chr5:+:24627187..24628968
Molecular Weight (calculated)
19207.5 Da
IEP (calculated)
8.258
GRAVY (calculated)
-0.642
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQEPSAAFS LRRNSFRRRS PRSNVDDRGW NPLHIKARKG DLKSVKQLLD QGMDVNALAW GPKSKGVSAL HLAAEGGHIE VMDLLLERGA NIDAKTWGSC
101: GWTPLHAAAK ERKREAVKFL VENGAFLADD ITDTRFNPPV HYCHGLEWAY EEMKKLNSES SSSSGGDTSS SSDN
101: GWTPLHAAAK ERKREAVKFL VENGAFLADD ITDTRFNPPV HYCHGLEWAY EEMKKLNSES SSSSGGDTSS SSDN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.