Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075540 | Potato | cytosol, mitochondrion | 63.95 | 72.37 |
| VIT_02s0087g00100.t01 | Wine grape | cytosol | 72.67 | 71.84 |
| Zm00001d014925_P001 | Maize | mitochondrion | 67.44 | 69.88 |
| EES06098 | Sorghum | cytosol, mitochondrion | 66.86 | 69.7 |
| KRH76405 | Soybean | cytosol | 69.19 | 69.19 |
| Os02t0102600-01 | Rice | cytosol, mitochondrion | 66.28 | 68.67 |
| KRH39707 | Soybean | cytosol | 68.6 | 68.6 |
| HORVU6Hr1G001980.1 | Barley | mitochondrion | 66.28 | 68.26 |
| PGSC0003DMT400011414 | Potato | cytosol | 66.86 | 68.05 |
| Solyc08g005910.2.1 | Tomato | cytosol | 66.86 | 68.05 |
| TraesCS6D01G006600.1 | Wheat | cytosol | 65.7 | 67.26 |
| TraesCS6A01G004600.1 | Wheat | mitochondrion | 65.7 | 66.86 |
| TraesCS6B01G009600.1 | Wheat | mitochondrion | 65.7 | 66.86 |
| Solyc12g096260.1.1 | Tomato | cytosol | 48.84 | 65.62 |
| TraesCS2B01G597300.1 | Wheat | cytosol | 63.95 | 65.48 |
| CDY23077 | Canola | cytosol | 61.63 | 60.23 |
| CDY02163 | Canola | cytosol, mitochondrion | 61.05 | 60.0 |
| Bra012976.1-P | Field mustard | cytosol, mitochondrion | 61.05 | 60.0 |
| AT5G07840.1 | Thale cress | cytosol | 59.3 | 58.29 |
| AT5G61230.1 | Thale cress | cytosol, plastid | 58.72 | 58.05 |
| CDX87205 | Canola | cytosol, mitochondrion | 60.47 | 55.91 |
| CDY16818 | Canola | cytosol, mitochondrion | 60.47 | 55.03 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr9G23190_001 | EnsemblPlants:GSMUA_Achr9P23190_001 | EnsemblPlants:GSMUA_Achr9T23190_001 | InterPro:IPR002110 |
| InterPro:IPR020683 | InterPro:IPR036770 | UniProt:M0U2S8 | PFAM:PF13606 | PFAM:PF13637 | PRINTS:PR01415 |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR45189 | SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI000295C889 |
Description
Putative Ankyrin-2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G23190_001]
Coordinates
chr9:+:28129997..28134176
Molecular Weight (calculated)
19429.2 Da
IEP (calculated)
9.188
GRAVY (calculated)
-0.613
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPEQQVKTR NYISSRRLFK HRLRERDDRG WTLLHIGARK GDLKEVKRLL DAGMDVNVTA LGCKALGVTP LHLAAQGGHI NVMDELLERG ANIDARTKGA
101: CGWTPLHIAA KERNKQAIKF LIENGAFLPP DINDNRFNPP LHYCPGLEWA YEIKHKQEEW LSSSGTSYSS EN
101: CGWTPLHIAA KERNKQAIKF LIENGAFLPP DINDNRFNPP LHYCPGLEWA YEIKHKQEEW LSSSGTSYSS EN
001: MLQEQPVALS FRPNSFRRRS METGVDRDDR GWTQLHIKAR EGDLKAVKEL LDQGADVNAL ACGPKSKGMT PLHLAAKGGH IEVMDLLLER GANMEARTSG
101: ACGWTPLHAA AKERKREAVK FLVGNGAFLP DDITDSRFNP PVQYCHGLEW AYEERKKLSE DTSLSCGDTS CSSAN
101: ACGWTPLHAA AKERKREAVK FLVGNGAFLP DDITDSRFNP PVQYCHGLEW AYEERKKLSE DTSLSCGDTS CSSAN
Arabidopsis Description
PIA1PIA1 [Source:UniProtKB/TrEMBL;Acc:A0A178UK09]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.