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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • mitochondrion 3
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr8P30040_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G36970.1 GSMUA_Achr11P... AT4G15930.1 21798944
AT4G36970.1 GSMUA_Achr8P30040_001 AT4G15930.1 21798944
AT4G36970.1 GSMUA_AchrUn_... AT4G15930.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P05710_001 Banana plastid 75.18 75.0
GSMUA_Achr3P07010_001 Banana nucleus 73.22 52.1
VIT_07s0031g00610.t01 Wine grape plastid 49.88 50.5
Os02t0767000-01 Rice nucleus 58.72 47.14
PGSC0003DMT400010346 Potato plastid 42.01 45.24
Solyc02g090900.2.1 Tomato plastid 40.79 44.03
KRH52008 Soybean mitochondrion 49.39 42.14
Solyc02g064990.2.1 Tomato nucleus 40.05 42.12
KXG31173 Sorghum nucleus 59.71 41.61
TraesCS6A01G333200.1 Wheat nucleus 58.23 41.36
Zm00001d052157_P006 Maize plastid 58.23 41.07
PGSC0003DMT400065490 Potato nucleus 38.08 40.36
TraesCS6B01G363600.1 Wheat nucleus 57.74 40.03
KRH77003 Soybean nucleus, plastid 40.05 39.66
KRH57952 Soybean nucleus 40.05 39.37
VIT_18s0001g10420.t01 Wine grape nucleus 55.04 39.3
KRH28469 Soybean nucleus, plastid 38.82 38.73
HORVU6Hr1G080620.6 Barley nucleus 58.23 38.66
KRH04616 Soybean nucleus 38.82 38.54
Zm00001d018179_P015 Maize nucleus 56.27 36.29
AT4G36970.1 Thale cress plastid 37.59 35.83
Solyc04g078810.2.1 Tomato nucleus 50.12 35.29
PGSC0003DMT400020667 Potato nucleus 50.12 35.23
CDX69276 Canola nucleus, plastid 36.61 35.22
KRH15372 Soybean nucleus 52.83 35.19
Bra011737.1-P Field mustard nucleus, plastid 36.61 34.98
CDX75626 Canola nucleus, plastid 36.12 34.43
KRH05674 Soybean nucleus 50.86 33.99
Bra017801.1-P Field mustard plastid 31.45 33.86
CDY42723 Canola nucleus, plastid 32.68 33.5
PGSC0003DMT400020663 Potato nucleus 41.52 32.94
TraesCS6D01G312000.1 Wheat nucleus, plastid 57.25 32.72
KRH66111 Soybean nucleus 15.97 32.66
AT1G45207.2 Thale cress nucleus, plastid 41.77 30.63
CDY17058 Canola nucleus, plastid 38.33 30.29
Bra014045.1-P Field mustard nucleus, plastid 38.33 30.29
CDY43217 Canola nucleus 37.84 29.84
CDY67768 Canola plastid 18.92 27.8
Protein Annotations
EnsemblPlants:GSMUA_Achr8P23340_001EnsemblPlants:GSMUA_Achr8T23340_001EnsemblPlantsGene:GSMUA_Achr8G23340_001InterPro:Remorin_Cncoils:CoilPANTHER:PTHR31471
PANTHER:PTHR31471:SF13PFAM:PF03763SEG:segUniParc:UPI0002956010UniProt:M0TSY7MapMan:35.2
Description
Putative Remorin [Source:GMGC_GENE;Acc:GSMUA_Achr8G23340_001]
Coordinates
chr8:+:27819773..27825255
Molecular Weight (calculated)
43970.6 Da
IEP (calculated)
10.407
GRAVY (calculated)
-0.691
Length
407 amino acids
Sequence
(BLAST)
001: MKKSSAASCR SRSGTFPSPG TPIYRHGVGS VAYQNGWSSE RVPLPTHCNR RYGGSGVLLP FANGRALPSK WEDAERWIFS PVSGDGVGSS SVPPSHHRRP
101: KSKSGPLGAP AGKAGAYSSA SPLVPCFDSG RVRNYAANSP FLAGVLMPER SFCGNGGGVR GGDGEPYVVR SASIHGWSDT LIESSSSVPS SQDEKSEGTR
201: ESASTVSAAV LRKDVATQMS PDGSIPSSPK GRPFSPSPSL VPPLEELENH FSKSVVRDVQ VDDQVTVTRW SKKHTARGSD RRLASILEWK KKKTEASNSS
301: GWEVDETAKS TSKYKREEAK ITAWENLQKA KAEAEIRKLE MKLEKKRSSS MEKILNKLRS AQKKAQEMRS TVTTSQDNQL GKTTRKASYF CKSGQISSLS
401: GCFTCAF
Best Arabidopsis Sequence Match ( AT1G45207.3 )
(BLAST)
001: MPSESSYKVH RPAKSGGSRR DSSPDSIIFT PESNLSLFSS ASVSVDRCSS TSDAHDRDDS LISGPSLERD QRVSSSCKDL DLDKRGTGWK NSCNSRKSNK
101: VKAWKEEFEV KKDDESQNLD SARSSFSVAL RECQERRSRS EALAKKLDYQ RTVSLDLSNV TSTSPRVVNV KRASVSTNKS SVFPSPGTPT YLHSMQKGWS
201: SERVPLRSNG GRSPPNAGFL PLYSGRTVPS KWEDAERWIV SPLAKEGAAR TSFGASHERR PKAKSGPLGP PGFAYYSLYS PAVPMVHGGN MGGLTASSPF
301: SAGVLPETVS SRGSTTAAFP QRIDPSMARS VSIHGCSETL ASSSQDDIHE SMKDAATDAQ AVSRRDMATQ MSPEGSIRFS PERQCSFSPS SPSPLPISEL
401: LNAHSNRAEV KDLQVDEKVT VTRWSKKHRG LYHGNGSKMR DHVHGKATNH EDLTCATEEA RIISWENLQK AKAEAAIRKL EMKLEKKRSS SMEKIMRKVK
501: SAEKRAEEMR RSVLDNRVST ASHGKASSFK RSGKKKIPSL SGCFTCHVF
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:F4HRB5]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.