CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15372	Soybean	nucleus	88.34	88.05
VIT_18s0001g10420.t01	Wine grape	nucleus	60.43	64.56
KRH52008	Soybean	mitochondrion	48.11	61.43
Solyc04g078810.2.1	Tomato	nucleus	56.49	59.52
PGSC0003DMT400020667	Potato	nucleus	55.83	58.72
PGSC0003DMT400020663	Potato	nucleus	48.28	57.31
KRH66111	Soybean	nucleus	18.23	55.78
GSMUA_Achr5P05710_001	Banana	plastid	34.32	51.23
GSMUA_Achr8P23340_001	Banana	plastid	33.99	50.86
Bra014045.1-P	Field mustard	nucleus, plastid	41.87	49.51
CDY17058	Canola	nucleus, plastid	41.71	49.32
CDY43217	Canola	nucleus	41.54	49.03
AT1G45207.2	Thale cress	nucleus, plastid	44.01	48.29
Zm00001d020387_P001	Maize	nucleus, plastid	6.4	45.88
Zm00001d017576_P001	Maize	nucleus, plastid	6.4	45.88
Zm00001d039978_P001	Maize	nucleus, plastid	6.24	44.71
Zm00001d019245_P001	Maize	nucleus	6.24	44.71
Os02t0767000-01	Rice	nucleus	34.65	41.62
GSMUA_Achr3P07010_001	Banana	nucleus	38.75	41.26
KRH57952	Soybean	nucleus	27.42	40.34
KRH77003	Soybean	nucleus, plastid	26.93	39.9
KRH28469	Soybean	nucleus, plastid	26.27	39.22
Zm00001d005881_P002	Maize	nucleus	23.65	38.5
TraesCS6A01G333200.1	Wheat	nucleus	36.12	38.39
KRH04616	Soybean	nucleus	25.78	38.29
KXG31173	Sorghum	nucleus	36.62	38.18
TraesCS6B01G363600.1	Wheat	nucleus	36.45	37.82
Zm00001d052157_P006	Maize	plastid	35.63	37.61
HORVU6Hr1G080620.6	Barley	nucleus	35.96	35.73
Zm00001d010608_P001	Maize	nucleus	9.2	34.78
KXG35763	Sorghum	nucleus	34.81	34.25
TraesCS5D01G244300.2	Wheat	nucleus	34.32	33.98
Zm00001d018179_P015	Maize	nucleus	35.14	33.91
HORVU5Hr1G068200.5	Barley	nucleus	34.15	33.82
TraesCS5B01G235500.1	Wheat	nucleus	33.66	33.33
Os08t0471800-01	Rice	nucleus	32.84	33.22
TraesCS5A01G237300.2	Wheat	nucleus	33.83	33.12
Zm00001d020708_P001	Maize	cytosol	33.17	32.85
Os09t0456100-01	Rice	nucleus	33.17	32.58
Zm00001d020329_P001	Maize	plastid	9.85	32.26
TraesCS6D01G312000.1	Wheat	nucleus, plastid	35.47	30.34
KXG25311	Sorghum	nucleus	29.39	28.87
Zm00001d050017_P001	Maize	nucleus	30.54	27.72

Protein Annotations

EMBL:ACUP02010770	EnsemblPlants:KRH05674	EnsemblPlantsGene:GLYMA_17G241500	EntrezGene:100792609	InterPro:Remorin_C	ncoils:Coil
PANTHER:PTHR31471	PANTHER:PTHR31471:SF13	PFAM:PF03763	ProteinID:KRH05674	ProteinID:KRH05674.1	SEG:seg
UniParc:UPI000233E661	UniProt:K7MNP3	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:39722521..39726443

Molecular Weight (calculated)

66206.0 Da

IEP (calculated)

10.164

GRAVY (calculated)

-0.775

Length

609 amino acids

Sequence
(BLAST)

001: MPELGFQERR SWRRRGGDTS PDSVIFTLES NLSLFSSASA SVDRCSFASD AHDHDSLASE ISLHLAVQDH DGDFARSESW SGQDPDPDLN KRQQQQQQRH
101: ADTDSDAVHG KHRRNRFSGK REKAKVQKEE DSDGGDTEDG NQHLEFDSAR NSFSLALKEC QDRRSRSETL YKKHDRRRPA SLDLNNAIGN GNVSSPRLEL
201: GAMKKSTLCT RRSGSGSGNG NFPSPGTPNY LHASVAMQKG WSSERVPLHT SAARKQVGAA LFPFNNGRTL PSKWEDAERW ILSPVSGDGG TGRASLPAPQ
301: RRPKSKSGPL GPPGAAAVAY YSMYSPAVPL FESGNSGSFM AASPFSAAVS VSAAAADGLT ASSGGSTDPC MARSVSVHGC SQMQSQSSLP AQGEKFDGFK
401: DAGTNVSPAL SRRDMATQMS PEGSSCSSPS LRPSLSASTP SSFPLSEFKS LPFSKMDIRD VPVDERVTMT RWSKKHRALF SGRGSENGDN WKIKESSCRS
501: SFWDISGGSK TVSKSKREEA KINSWENLQK AKAEAAIRKL EMKLEKKRAS SMDKIMTKLR LAQKKAQEMR SSTLANQPHQ VPRTPHKAIL FSRASQMGSL
601: SGCFTCHAF

Best Arabidopsis Sequence Match ( AT1G45207.3 )
(BLAST)

001: MPSESSYKVH RPAKSGGSRR DSSPDSIIFT PESNLSLFSS ASVSVDRCSS TSDAHDRDDS LISGPSLERD QRVSSSCKDL DLDKRGTGWK NSCNSRKSNK
101: VKAWKEEFEV KKDDESQNLD SARSSFSVAL RECQERRSRS EALAKKLDYQ RTVSLDLSNV TSTSPRVVNV KRASVSTNKS SVFPSPGTPT YLHSMQKGWS
201: SERVPLRSNG GRSPPNAGFL PLYSGRTVPS KWEDAERWIV SPLAKEGAAR TSFGASHERR PKAKSGPLGP PGFAYYSLYS PAVPMVHGGN MGGLTASSPF
301: SAGVLPETVS SRGSTTAAFP QRIDPSMARS VSIHGCSETL ASSSQDDIHE SMKDAATDAQ AVSRRDMATQ MSPEGSIRFS PERQCSFSPS SPSPLPISEL
401: LNAHSNRAEV KDLQVDEKVT VTRWSKKHRG LYHGNGSKMR DHVHGKATNH EDLTCATEEA RIISWENLQK AKAEAAIRKL EMKLEKKRSS SMEKIMRKVK
501: SAEKRAEEMR RSVLDNRVST ASHGKASSFK RSGKKKIPSL SGCFTCHVF

Arabidopsis Description

Remorin family protein [Source:UniProtKB/TrEMBL;Acc:F4HRB5]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.