Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G244300.2 | Wheat | nucleus | 87.32 | 87.32 |
| TraesCS5A01G237300.2 | Wheat | nucleus | 88.29 | 87.3 |
| TraesCS5B01G235500.1 | Wheat | nucleus | 86.99 | 86.99 |
| Os09t0456100-01 | Rice | nucleus | 62.6 | 62.1 |
| KXG35763 | Sorghum | nucleus | 61.95 | 61.55 |
| Zm00001d005881_P002 | Maize | nucleus | 37.4 | 61.5 |
| Zm00001d020708_P001 | Maize | cytosol | 61.14 | 61.14 |
| VIT_07s0031g00610.t01 | Wine grape | plastid | 26.34 | 40.3 |
| VIT_18s0001g10420.t01 | Wine grape | nucleus | 35.94 | 38.77 |
| Solyc02g090900.2.1 | Tomato | plastid | 23.41 | 38.2 |
| KRH52008 | Soybean | mitochondrion | 28.94 | 37.32 |
| PGSC0003DMT400010346 | Potato | plastid | 22.76 | 37.04 |
| KRH57952 | Soybean | nucleus | 24.88 | 36.96 |
| Solyc02g064990.2.1 | Tomato | nucleus | 23.25 | 36.95 |
| Solyc04g078810.2.1 | Tomato | nucleus | 34.15 | 36.33 |
| KRH77003 | Soybean | nucleus, plastid | 24.23 | 36.25 |
| KRH66111 | Soybean | nucleus | 11.71 | 36.18 |
| PGSC0003DMT400065490 | Potato | nucleus | 22.44 | 35.94 |
| PGSC0003DMT400020667 | Potato | nucleus | 33.82 | 35.92 |
| KRH28469 | Soybean | nucleus, plastid | 23.74 | 35.78 |
| KRH04616 | Soybean | nucleus | 23.74 | 35.61 |
| Bra017801.1-P | Field mustard | plastid | 21.79 | 35.45 |
| KRH15372 | Soybean | nucleus | 35.12 | 35.35 |
| CDY42723 | Canola | nucleus, plastid | 22.6 | 35.01 |
| HORVU6Hr1G080620.6 | Barley | nucleus | 34.15 | 34.26 |
| KRH05674 | Soybean | nucleus | 33.82 | 34.15 |
| PGSC0003DMT400020663 | Potato | nucleus | 28.13 | 33.72 |
| CDX69276 | Canola | nucleus, plastid | 23.09 | 33.57 |
| AT4G36970.1 | Thale cress | plastid | 23.09 | 33.26 |
| CDX75626 | Canola | nucleus, plastid | 23.09 | 33.26 |
| AT1G45207.2 | Thale cress | nucleus, plastid | 29.92 | 33.15 |
| Bra011737.1-P | Field mustard | nucleus, plastid | 22.93 | 33.1 |
| CDY67768 | Canola | plastid | 14.31 | 31.77 |
| Bra014045.1-P | Field mustard | nucleus, plastid | 26.02 | 31.07 |
| CDY17058 | Canola | nucleus, plastid | 25.85 | 30.87 |
| CDY43217 | Canola | nucleus | 25.69 | 30.62 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G068200.5 | EnsemblPlantsGene:HORVU5Hr1G068200 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF21 |
| PFAM:PF03763 | SEG:seg | UniParc:UPI000B46461C | UniProt:A0A287RML9 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr5H:+:516498347..516504796
Molecular Weight (calculated)
65992.6 Da
IEP (calculated)
10.006
GRAVY (calculated)
-0.680
Length
615 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGAGDCGLE FRGVMGEEEE EEAASASASE RAMRRRRRWG AEADDGYSTS STGGRGGSSG SGSGSFGCDS PLAGFVRADG DMEGTDLETD GLAATSSSSA
101: SAAFTEPHDD EEAQSRQEPA KSPAGTATAI RECQSQRRCR TDAVYLHGRK GLKQRPASLD FGSAGFSSGT PFSPGFVVGG AGFVSKGLVS SQISSGVFPS
201: PGTPSYPRRH RPSALGYQKG WSSERVPLPS KGNNTRRYPG SSMAFPLNNR RTLPSKWEDA ERWIFSPKSN AGDAREKTAT LPHARRPKAK SGPLGPPGRL
301: GGQYSSVSSS VSLFDSGRVG HLAANSPFLA GVLIPEHYGG AKSNVRRYTS GTAGDEFGIG IVGRSSLAAI GSPAIPSTTV RRRLDTAIES SVSLPSTRES
401: VQGEEAEFVE DSAPVATPII SRKDTATQTS PDLSRSSSPS ARPSFVRSFS MQQAKEESCF SDLEIRDVQM DDRVSLTRWS KKHVTQASNK NSTNILEWNR
501: KTVDSKSSSW ESTETKCTLK VEREEAKLTA WENLQKAKAE AAIQKLVMKL EKKRSFSLDR ILNTLRSAQR KAQGMRDAAT ASQDEHVCRK AKKTSHVTKN
601: GQIRSLSGCF TCHAF
101: SAAFTEPHDD EEAQSRQEPA KSPAGTATAI RECQSQRRCR TDAVYLHGRK GLKQRPASLD FGSAGFSSGT PFSPGFVVGG AGFVSKGLVS SQISSGVFPS
201: PGTPSYPRRH RPSALGYQKG WSSERVPLPS KGNNTRRYPG SSMAFPLNNR RTLPSKWEDA ERWIFSPKSN AGDAREKTAT LPHARRPKAK SGPLGPPGRL
301: GGQYSSVSSS VSLFDSGRVG HLAANSPFLA GVLIPEHYGG AKSNVRRYTS GTAGDEFGIG IVGRSSLAAI GSPAIPSTTV RRRLDTAIES SVSLPSTRES
401: VQGEEAEFVE DSAPVATPII SRKDTATQTS PDLSRSSSPS ARPSFVRSFS MQQAKEESCF SDLEIRDVQM DDRVSLTRWS KKHVTQASNK NSTNILEWNR
501: KTVDSKSSSW ESTETKCTLK VEREEAKLTA WENLQKAKAE AAIQKLVMKL EKKRSFSLDR ILNTLRSAQR KAQGMRDAAT ASQDEHVCRK AKKTSHVTKN
601: GQIRSLSGCF TCHAF
001: MPSESSYKVH RPAKSGGSRR DSSPDSIIFT PESNLSLFSS ASVSVDRCSS TSDAHDRDDS LISGPSLERD QRVSSSCKDL DLDKRGTGWK NSCNSRKSNK
101: VKAAWKEEFE VKKDDESQNL DSARSSFSVA LRECQERRSR SEALAKKLDY QRTVSLDLSN VTSTSPRVVN VKRASVSTNK SSVFPSPGTP TYLHSMQKGW
201: SSERVPLRSN GGRSPPNAGF LPLYSGRTVP SKWEDAERWI VSPLAKEGAA RTSFGASHER RPKAKSGPLG PPGFAYYSLY SPAVPMVHGG NMGGLTASSP
301: FSAGVLPETV SSRGSTTAAF PQRIDPSMAR SVSIHGCSET LASSSQDDIH ESMKDAATDA QAVSRRDMAT QMSPEGSIRF SPERQCSFSP SSPSPLPISE
401: LLNAHSNRAE VKDLQVDEKV TVTRWSKKHR GLYHGNGSKM RDHVHGKATN HEDLTCATEE ARIISWENLQ KAKAEAAIRK LEKYFPQMKL EKKRSSSMEK
501: IMRKVKSAEK RAEEMRRSVL DNRVSTASHG KASSFKRSGK KKIPSLSGCF TCHVF
101: VKAAWKEEFE VKKDDESQNL DSARSSFSVA LRECQERRSR SEALAKKLDY QRTVSLDLSN VTSTSPRVVN VKRASVSTNK SSVFPSPGTP TYLHSMQKGW
201: SSERVPLRSN GGRSPPNAGF LPLYSGRTVP SKWEDAERWI VSPLAKEGAA RTSFGASHER RPKAKSGPLG PPGFAYYSLY SPAVPMVHGG NMGGLTASSP
301: FSAGVLPETV SSRGSTTAAF PQRIDPSMAR SVSIHGCSET LASSSQDDIH ESMKDAATDA QAVSRRDMAT QMSPEGSIRF SPERQCSFSP SSPSPLPISE
401: LLNAHSNRAE VKDLQVDEKV TVTRWSKKHR GLYHGNGSKM RDHVHGKATN HEDLTCATEE ARIISWENLQ KAKAEAAIRK LEKYFPQMKL EKKRSSSMEK
501: IMRKVKSAEK RAEEMRRSVL DNRVSTASHG KASSFKRSGK KKIPSLSGCF TCHVF
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:F4HRB5]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.