Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G333200.1 | Wheat | nucleus | 81.57 | 87.26 |
| TraesCS6B01G363600.1 | Wheat | nucleus | 82.71 | 86.37 |
| Os02t0767000-01 | Rice | nucleus | 67.86 | 82.05 |
| KXG31173 | Sorghum | nucleus | 69.33 | 72.77 |
| Zm00001d052157_P006 | Maize | plastid | 68.03 | 72.27 |
| TraesCS6D01G312000.1 | Wheat | nucleus, plastid | 78.47 | 67.56 |
| Zm00001d018179_P015 | Maize | nucleus | 64.93 | 63.07 |
| GSMUA_Achr8P23340_001 | Banana | plastid | 38.66 | 58.23 |
| GSMUA_Achr5P05710_001 | Banana | plastid | 37.19 | 55.88 |
| VIT_07s0031g00610.t01 | Wine grape | plastid | 30.02 | 45.77 |
| GSMUA_Achr3P07010_001 | Banana | nucleus | 42.41 | 45.45 |
| KRH66111 | Soybean | nucleus | 14.52 | 44.72 |
| KRH52008 | Soybean | mitochondrion | 31.65 | 40.67 |
| VIT_18s0001g10420.t01 | Wine grape | nucleus | 37.19 | 40.0 |
| Solyc02g090900.2.1 | Tomato | plastid | 24.31 | 39.52 |
| KRH77003 | Soybean | nucleus, plastid | 26.43 | 39.42 |
| PGSC0003DMT400010346 | Potato | plastid | 23.98 | 38.89 |
| PGSC0003DMT400065490 | Potato | nucleus | 24.31 | 38.8 |
| Solyc02g064990.2.1 | Tomato | nucleus | 24.47 | 38.76 |
| KRH28469 | Soybean | nucleus, plastid | 25.61 | 38.48 |
| KRH04616 | Soybean | nucleus | 25.61 | 38.29 |
| KRH57952 | Soybean | nucleus | 25.29 | 37.44 |
| KRH15372 | Soybean | nucleus | 36.87 | 36.99 |
| PGSC0003DMT400020667 | Potato | nucleus | 34.75 | 36.79 |
| Solyc04g078810.2.1 | Tomato | nucleus | 34.42 | 36.51 |
| KRH05674 | Soybean | nucleus | 35.73 | 35.96 |
| Bra017801.1-P | Field mustard | plastid | 21.7 | 35.19 |
| PGSC0003DMT400020663 | Potato | nucleus | 29.36 | 35.09 |
| Bra014045.1-P | Field mustard | nucleus, plastid | 29.2 | 34.76 |
| CDY17058 | Canola | nucleus, plastid | 29.2 | 34.76 |
| CDY42723 | Canola | nucleus, plastid | 22.19 | 34.26 |
| HORVU5Hr1G068200.5 | Barley | nucleus | 34.26 | 34.15 |
| CDY43217 | Canola | nucleus | 28.71 | 34.11 |
| AT1G45207.2 | Thale cress | nucleus, plastid | 30.83 | 34.05 |
| CDX69276 | Canola | nucleus, plastid | 23.49 | 34.04 |
| AT4G36970.1 | Thale cress | plastid | 23.49 | 33.72 |
| Bra011737.1-P | Field mustard | nucleus, plastid | 23.33 | 33.57 |
| CDX75626 | Canola | nucleus, plastid | 23.0 | 33.02 |
| CDY67768 | Canola | plastid | 13.54 | 29.96 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G080620.6 | EnsemblPlantsGene:HORVU6Hr1G080620 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF13 |
| PFAM:PF03763 | SEG:seg | UniParc:UPI000B46E51F | UniProt:A0A287UVW6 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr6H:+:542411656..542417027
Molecular Weight (calculated)
65785.5 Da
IEP (calculated)
10.395
GRAVY (calculated)
-0.706
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: AIFNPRRGGK PRLAPLIDCP AVAPSSGNAT ARPAMPRAAP GLGFPAGPAT ERRHHPPSSR RKKPPPRRRR PAPPPAPPVG PRGAPDPDPG LLHHLHLRGS
101: SHASRATAPR DDDEAEAGYD AAGLEEAAAG DSFSHSLKEC QKQLQLRAEA RPPAASHELG NGDAFGGIEL LVLSPRCLLG AAVGGMSKSS TASSRSRSGT
201: FPSPGTPNYH RHCAGNMQYP KGWSSERVPL GAGANRRYGG SGVVLPFNNG RKLPSKWEDA EKWILSPVSC DGMGRMSAPA PHHRRPKSKS GPLGHPAGVP
301: GAYASVSPMI PCFDGVLAAA NFAAHSPFSA GVLMPGHARN GDFSSGRARS GDDGSSRSYS AEKEPYIWRS SSTHAWTETL MEASAFAHIS EEAAQDDVLQ
401: GQQGATPAIS SPIIKKDVAT QMSPDDSIIS SSPKARHSCS SLPSGHAIRE SNSHTPKVEV RDVQVDDQVT VTRWSKRHVT RGSDKRSTNI VEWRKKTTEA
501: RAPSFDEKER ERCISKCKRE EAKITAWENL QKAKAEAAIR KLEMKLEKKR SSSMDRILGK LRSAQKKAQG MRSTVSEDQC AVSEDQCAVR ATKKASLRRS
601: GKPFSCCFTY HAC
101: SHASRATAPR DDDEAEAGYD AAGLEEAAAG DSFSHSLKEC QKQLQLRAEA RPPAASHELG NGDAFGGIEL LVLSPRCLLG AAVGGMSKSS TASSRSRSGT
201: FPSPGTPNYH RHCAGNMQYP KGWSSERVPL GAGANRRYGG SGVVLPFNNG RKLPSKWEDA EKWILSPVSC DGMGRMSAPA PHHRRPKSKS GPLGHPAGVP
301: GAYASVSPMI PCFDGVLAAA NFAAHSPFSA GVLMPGHARN GDFSSGRARS GDDGSSRSYS AEKEPYIWRS SSTHAWTETL MEASAFAHIS EEAAQDDVLQ
401: GQQGATPAIS SPIIKKDVAT QMSPDDSIIS SSPKARHSCS SLPSGHAIRE SNSHTPKVEV RDVQVDDQVT VTRWSKRHVT RGSDKRSTNI VEWRKKTTEA
501: RAPSFDEKER ERCISKCKRE EAKITAWENL QKAKAEAAIR KLEMKLEKKR SSSMDRILGK LRSAQKKAQG MRSTVSEDQC AVSEDQCAVR ATKKASLRRS
601: GKPFSCCFTY HAC
001: MPSESSYKVH RPAKSGGSRR DSSPDSIIFT PESNLSLFSS ASVSVDRCSS TSDAHDRDDS LISGPSLERD QRVSSSCKDL DLDKRGTGWK NSCNSRKSNK
101: VKAAWKEEFE VKKDDESQNL DSARSSFSVA LRECQERRSR SEALAKKLDY QRTVSLDLSN VTSTSPRVVN VKRASVSTNK SSVFPSPGTP TYLHSMQKGW
201: SSERVPLRSN GGRSPPNAGF LPLYSGRTVP SKWEDAERWI VSPLAKEGAA RTSFGASHER RPKAKSGPLG PPGFAYYSLY SPAVPMVHGG NMGGLTASSP
301: FSAGVLPETV SSRGSTTAAF PQRIDPSMAR SVSIHGCSET LASSSQDDIH ESMKDAATDA QAVSRRDMAT QMSPEGSIRF SPERQCSFSP SSPSPLPISE
401: LLNAHSNRAE VKDLQVDEKV TVTRWSKKHR GLYHGNGSKM RDHVHGKATN HEDLTCATEE ARIISWENLQ KAKAEAAIRK LEKYFPQMKL EKKRSSSMEK
501: IMRKVKSAEK RAEEMRRSVL DNRVSTASHG KASSFKRSGK KKIPSLSGCF TCHVF
101: VKAAWKEEFE VKKDDESQNL DSARSSFSVA LRECQERRSR SEALAKKLDY QRTVSLDLSN VTSTSPRVVN VKRASVSTNK SSVFPSPGTP TYLHSMQKGW
201: SSERVPLRSN GGRSPPNAGF LPLYSGRTVP SKWEDAERWI VSPLAKEGAA RTSFGASHER RPKAKSGPLG PPGFAYYSLY SPAVPMVHGG NMGGLTASSP
301: FSAGVLPETV SSRGSTTAAF PQRIDPSMAR SVSIHGCSET LASSSQDDIH ESMKDAATDA QAVSRRDMAT QMSPEGSIRF SPERQCSFSP SSPSPLPISE
401: LLNAHSNRAE VKDLQVDEKV TVTRWSKKHR GLYHGNGSKM RDHVHGKATN HEDLTCATEE ARIISWENLQ KAKAEAAIRK LEKYFPQMKL EKKRSSSMEK
501: IMRKVKSAEK RAEEMRRSVL DNRVSTASHG KASSFKRSGK KKIPSLSGCF TCHVF
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:F4HRB5]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.