CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
plasma membrane 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05674	Soybean	nucleus	88.05	88.34
VIT_18s0001g10420.t01	Wine grape	nucleus	60.88	65.26
KRH52008	Soybean	mitochondrion	48.94	62.68
Solyc04g078810.2.1	Tomato	nucleus	55.65	58.82
PGSC0003DMT400020667	Potato	nucleus	54.83	57.86
KRH66111	Soybean	nucleus	18.49	56.78
PGSC0003DMT400020663	Potato	nucleus	47.14	56.14
GSMUA_Achr8P23340_001	Banana	plastid	35.19	52.83
GSMUA_Achr5P05710_001	Banana	plastid	34.7	51.96
Zm00001d017576_P001	Maize	nucleus, plastid	6.87	49.41
Zm00001d020387_P001	Maize	nucleus, plastid	6.87	49.41
Bra014045.1-P	Field mustard	nucleus, plastid	41.57	49.32
CDY17058	Canola	nucleus, plastid	41.41	49.13
CDY43217	Canola	nucleus	41.24	48.84
AT1G45207.2	Thale cress	nucleus, plastid	43.86	48.29
Zm00001d039978_P001	Maize	nucleus, plastid	6.71	48.24
Zm00001d019245_P001	Maize	nucleus	6.71	48.24
Os02t0767000-01	Rice	nucleus	36.01	43.39
GSMUA_Achr3P07010_001	Banana	nucleus	39.28	41.96
KRH57952	Soybean	nucleus	27.99	41.3
KRH04616	Soybean	nucleus	27.0	40.24
KRH77003	Soybean	nucleus, plastid	27.0	40.15
Zm00001d005881_P002	Maize	nucleus	24.55	40.11
KXG31173	Sorghum	nucleus	37.48	39.21
TraesCS6A01G333200.1	Wheat	nucleus	36.66	39.09
KRH28469	Soybean	nucleus, plastid	26.02	38.97
TraesCS6B01G363600.1	Wheat	nucleus	37.15	38.67
Zm00001d052157_P006	Maize	plastid	36.33	38.47
HORVU6Hr1G080620.6	Barley	nucleus	36.99	36.87
Zm00001d010608_P001	Maize	nucleus	9.66	36.65
TraesCS5D01G244300.2	Wheat	nucleus	35.52	35.28
HORVU5Hr1G068200.5	Barley	nucleus	35.35	35.12
KXG35763	Sorghum	nucleus	35.35	34.9
Zm00001d018179_P015	Maize	nucleus	36.01	34.87
TraesCS5A01G237300.2	Wheat	nucleus	35.35	34.73
TraesCS5B01G235500.1	Wheat	nucleus	34.86	34.63
Os08t0471800-01	Rice	nucleus	34.04	34.55
Zm00001d020708_P001	Maize	cytosol	34.04	33.82
Os09t0456100-01	Rice	nucleus	34.21	33.71
Zm00001d020329_P001	Maize	plastid	10.15	33.33
TraesCS6D01G312000.1	Wheat	nucleus, plastid	36.5	31.32
KXG25311	Sorghum	nucleus	30.61	30.16
Zm00001d050017_P001	Maize	nucleus	31.75	28.91

Protein Annotations

EMBL:ACUP02008578	EnsemblPlants:KRH15372	EnsemblPlantsGene:GLYMA_14G083500	EntrezGene:100782306	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:Remorin_C	ncoils:Coil	PANTHER:PTHR31471	PANTHER:PTHR31471:SF13	PFAM:PF03763
ProteinID:KRH15372	ProteinID:KRH15372.1	SEG:seg	UniParc:UPI000233B6DD	UniProt:I1M8N2	MapMan:35.2

Description

hypothetical protein

Coordinates

chr14:+:7277484..7282675

Molecular Weight (calculated)

66316.4 Da

IEP (calculated)

10.207

GRAVY (calculated)

-0.704

Length

611 amino acids

Sequence
(BLAST)

001: MRMRELGFQE RRSWRRRGGD TSPDSVIFTL ESNLSLFSSA SASVDRCSFA SDAHDHDSLA SEISLHLAAQ DHDGDFAHSE SWSGPDPDLD PNKRQQQRHA
101: DTDSDAAHTK HRRNRFSGKG EKAKVQKEED SDGGDTEDGN QHLEFDSARN SFSLALKECQ DRRSRSEALF KKHDRRRPAS LDLNNAIGNG NVSSPHLGLS
201: AMKKSTLCSR RSGSGTFPSP GTPNYLHATV AMQKGWSSER VPLHTSAARK QVGAALLPFN NGRTLPSKWE DAERWILSPV SGDGGTGRAS LPAPQRRPKS
301: KSGPLGPPGV AAVAYYSMYS PAVPLFEGAN SRSFMAASPF SAAVSVPAAA ADGLTASSGG SCGVLSTRTD PCMARSVSVH GCSQMHSQSS LPAQGEKFDG
401: FKDAGTNVSP ALSRRDMATQ MSPEGSSCSS PSLRPSFSAS TPPSLPLSEF RSLPFSKMDI RDVPVDEHVT MTRWSKKHRA LFSGRGSENV DSWKIKESSS
501: RSSSWDISEG SKTVSKAKRV EAKINAWENL QKAKAEAAIQ KLEMKLEKKR ASSMDKIMNK LRLAQKKAQE MRSSALANQP HHVPRTPHKA ILFSRASQMG
601: SLSGCFTCHA F

Best Arabidopsis Sequence Match ( AT1G45207.3 )
(BLAST)

001: MPSESSYKVH RPAKSGGSRR DSSPDSIIFT PESNLSLFSS ASVSVDRCSS TSDAHDRDDS LISGPSLERD QRVSSSCKDL DLDKRGTGWK NSCNSRKSNK
101: VKAWKEEFEV KKDDESQNLD SARSSFSVAL RECQERRSRS EALAKKLDYQ RTVSLDLSNV TSTSPRVVNV KRASVSTNKS SVFPSPGTPT YLHSMQKGWS
201: SERVPLRSNG GRSPPNAGFL PLYSGRTVPS KWEDAERWIV SPLAKEGAAR TSFGASHERR PKAKSGPLGP PGFAYYSLYS PAVPMVHGGN MGGLTASSPF
301: SAGVLPETVS SRGSTTAAFP QRIDPSMARS VSIHGCSETL ASSSQDDIHE SMKDAATDAQ AVSRRDMATQ MSPEGSIRFS PERQCSFSPS SPSPLPISEL
401: LNAHSNRAEV KDLQVDEKVT VTRWSKKHRG LYHGNGSKMR DHVHGKATNH EDLTCATEEA RIISWENLQK AKAEAAIRKL EMKLEKKRSS SMEKIMRKVK
501: SAEKRAEEMR RSVLDNRVST ASHGKASSFK RSGKKKIPSL SGCFTCHVF

Arabidopsis Description

Remorin family protein [Source:UniProtKB/TrEMBL;Acc:F4HRB5]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.