Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36970.1 | CDY08148 | AT3G49580.1 | 21798944 |
| AT4G36970.1 | CDY24919 | AT4G15930.1 | 21798944 |
| AT4G36970.1 | CDY57865 | AT4G15930.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017801.1-P | Field mustard | plastid | 89.42 | 93.92 |
| CDY67768 | Canola | plastid | 56.17 | 80.51 |
| CDX69276 | Canola | nucleus, plastid | 64.48 | 60.52 |
| AT4G36970.1 | Thale cress | plastid | 62.22 | 57.85 |
| CDX75626 | Canola | nucleus, plastid | 61.71 | 57.38 |
| Zm00001d020387_P001 | Maize | nucleus, plastid | 8.31 | 38.82 |
| Zm00001d017576_P001 | Maize | nucleus, plastid | 8.31 | 38.82 |
| Zm00001d039978_P001 | Maize | nucleus, plastid | 8.06 | 37.65 |
| Zm00001d019245_P001 | Maize | nucleus | 8.06 | 37.65 |
| VIT_07s0031g00610.t01 | Wine grape | plastid | 37.78 | 37.31 |
| PGSC0003DMT400010346 | Potato | plastid | 35.26 | 37.04 |
| Solyc02g090900.2.1 | Tomato | plastid | 33.75 | 35.54 |
| KRH04616 | Soybean | nucleus | 36.52 | 35.37 |
| KRH57952 | Soybean | nucleus | 36.02 | 34.54 |
| PGSC0003DMT400065490 | Potato | nucleus | 33.25 | 34.38 |
| KRH28469 | Soybean | nucleus, plastid | 34.76 | 33.82 |
| KRH77003 | Soybean | nucleus, plastid | 35.01 | 33.82 |
| Solyc02g064990.2.1 | Tomato | nucleus | 32.75 | 33.59 |
| GSMUA_Achr8P23340_001 | Banana | plastid | 33.5 | 32.68 |
| GSMUA_Achr5P05710_001 | Banana | plastid | 33.5 | 32.6 |
| Zm00001d010608_P001 | Maize | nucleus | 12.09 | 29.81 |
| Zm00001d020329_P001 | Maize | plastid | 13.6 | 29.03 |
| Zm00001d005881_P002 | Maize | nucleus | 26.95 | 28.61 |
| Os02t0767000-01 | Rice | nucleus | 35.26 | 27.61 |
| CDY43217 | Canola | nucleus | 31.49 | 24.22 |
| CDY17058 | Canola | nucleus, plastid | 31.23 | 24.08 |
| Zm00001d052157_P006 | Maize | plastid | 34.51 | 23.74 |
| TraesCS6A01G333200.1 | Wheat | nucleus | 34.26 | 23.73 |
| KXG31173 | Sorghum | nucleus | 34.51 | 23.46 |
| TraesCS6B01G363600.1 | Wheat | nucleus | 34.51 | 23.34 |
| GSMUA_Achr3P07010_001 | Banana | nucleus | 33.5 | 23.25 |
| HORVU5Hr1G068200.5 | Barley | nucleus | 35.01 | 22.6 |
| TraesCS5A01G237300.2 | Wheat | nucleus | 35.01 | 22.35 |
| KXG35763 | Sorghum | nucleus | 34.76 | 22.29 |
| TraesCS5D01G244300.2 | Wheat | nucleus | 34.51 | 22.28 |
| TraesCS5B01G235500.1 | Wheat | nucleus | 34.51 | 22.28 |
| Os09t0456100-01 | Rice | nucleus | 34.76 | 22.26 |
| HORVU6Hr1G080620.6 | Barley | nucleus | 34.26 | 22.19 |
| Zm00001d020708_P001 | Maize | cytosol | 33.5 | 21.63 |
| Os08t0471800-01 | Rice | nucleus | 32.75 | 21.59 |
| Zm00001d018179_P015 | Maize | nucleus | 33.25 | 20.92 |
| TraesCS6D01G312000.1 | Wheat | nucleus, plastid | 34.26 | 19.1 |
| KXG25311 | Sorghum | nucleus | 29.22 | 18.71 |
| Zm00001d050017_P001 | Maize | nucleus | 27.71 | 16.39 |
Protein Annotations
| EnsemblPlants:CDY42723 | EnsemblPlantsGene:GSBRNA2T00075262001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF2 |
| PFAM:PF03763 | ProteinID:CDY42723 | ProteinID:CDY42723.1 | SEG:seg | UniParc:UPI0004EDB04D | UniProt:A0A078I0W3 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g53760DBnaA03g53760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0W3]
Coordinates
chrLK032532:+:258872..260824
Molecular Weight (calculated)
43669.9 Da
IEP (calculated)
10.705
GRAVY (calculated)
-0.752
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKTSVSSSS SSFGGFLSPG APPSYTDNNK GWSSERVPHP SSSSSTSTIN APRRRIGSAS ALTTPFYSGR AVPSKWEDAE RWICSPRWIC SPAVTTNPQR
101: RQKSKSGPIA PPPPALPHPR MTMMMRAVEA PPQGNSKKGL MVVGSPFSTG VLEAERVFRG SVGGGHGHSQ SCADLMSEEE TSSLSSKTDT EEKEEVITRR
201: DIATQMTPNN NHHSPQELSV SVIEPPPCRG GGEVREVKMD KGARLIKHPK RRVMSSSSRI IRRDHQPEAE PNSASWDISE PAMTLFKLHR EEAKIAAWEN
301: LQKAKAEAAM RKLEVKLEKK KSASMDKILN KLQTAKLKAQ DMRRSTTASS GDHGKEEQIS RNSAKITTHL VRRHTFMSPF MTCFAPRVDC RKSSSAL
101: RQKSKSGPIA PPPPALPHPR MTMMMRAVEA PPQGNSKKGL MVVGSPFSTG VLEAERVFRG SVGGGHGHSQ SCADLMSEEE TSSLSSKTDT EEKEEVITRR
201: DIATQMTPNN NHHSPQELSV SVIEPPPCRG GGEVREVKMD KGARLIKHPK RRVMSSSSRI IRRDHQPEAE PNSASWDISE PAMTLFKLHR EEAKIAAWEN
301: LQKAKAEAAM RKLEVKLEKK KSASMDKILN KLQTAKLKAQ DMRRSTTASS GDHGKEEQIS RNSAKITTHL VRRHTFMSPF MTCFAPRVDC RKSSSAL
001: MRKTSVSSNS FGGFLSPGAP SYADNKGWSS ERVPHPSSTT SSSAINGGRR HIGSSSALTT PFYSGRAIPS KWEDAERWIC SPVSTYPQGV CLNSSVSSEQ
101: RRQKSKSGPI VPPTLPHPHP TSSSSATGCY HYSPRMMMRS MDAPPKGLMV AGSPFSTGVL EADRVFRGSV GGGGCDGYGR GPGHGHSRSW VDLMSEETSS
201: LSSKTDTEEK AEMTTAMQSP VVSRRDMATQ MSPEETSPNN NNQSPPLVVS VIEPPPCRGE VREVKMDKGA RMIKRPKRRV MSSRIIRREQ PEVEDNSEAS
301: ASSSSWDISE PAMTLSKLQR EEAKIAAWEN LQKAKAEAAI RKLEVKLEKK KSASMDKILN KLQTAKIKAQ EMRRSSVSSE HEQQQGNHQI SRNSVKITHL
401: VRRHTFMTPF MTCFAPRVDC RKSSSAL
101: RRQKSKSGPI VPPTLPHPHP TSSSSATGCY HYSPRMMMRS MDAPPKGLMV AGSPFSTGVL EADRVFRGSV GGGGCDGYGR GPGHGHSRSW VDLMSEETSS
201: LSSKTDTEEK AEMTTAMQSP VVSRRDMATQ MSPEETSPNN NNQSPPLVVS VIEPPPCRGE VREVKMDKGA RMIKRPKRRV MSSRIIRREQ PEVEDNSEAS
301: ASSSSWDISE PAMTLSKLQR EEAKIAAWEN LQKAKAEAAI RKLEVKLEKK KSASMDKILN KLQTAKIKAQ EMRRSSVSSE HEQQQGNHQI SRNSVKITHL
401: VRRHTFMTPF MTCFAPRVDC RKSSSAL
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:O23188]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.