Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36970.1 | CDY08148 | AT3G49580.1 | 21798944 |
| AT4G36970.1 | CDY24919 | AT4G15930.1 | 21798944 |
| AT4G36970.1 | CDY57865 | AT4G15930.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011737.1-P | Field mustard | nucleus, plastid | 82.2 | 82.39 |
| CDX69276 | Canola | nucleus, plastid | 77.99 | 78.72 |
| AT4G36970.1 | Thale cress | plastid | 76.11 | 76.11 |
| CDY42723 | Canola | nucleus, plastid | 57.38 | 61.71 |
| CDY67768 | Canola | plastid | 35.36 | 54.51 |
| VIT_07s0031g00610.t01 | Wine grape | plastid | 38.88 | 41.29 |
| Solyc02g064990.2.1 | Tomato | nucleus | 36.3 | 40.05 |
| PGSC0003DMT400010346 | Potato | plastid | 35.13 | 39.68 |
| Solyc02g090900.2.1 | Tomato | plastid | 34.19 | 38.73 |
| PGSC0003DMT400065490 | Potato | nucleus | 33.96 | 37.76 |
| GSMUA_Achr8P23340_001 | Banana | plastid | 34.43 | 36.12 |
| KRH57952 | Soybean | nucleus | 34.89 | 35.99 |
| KRH77003 | Soybean | nucleus, plastid | 34.43 | 35.77 |
| KRH04616 | Soybean | nucleus | 33.96 | 35.37 |
| KRH28469 | Soybean | nucleus, plastid | 33.72 | 35.29 |
| Zm00001d020387_P001 | Maize | nucleus, plastid | 7.03 | 35.29 |
| Zm00001d019245_P001 | Maize | nucleus | 7.03 | 35.29 |
| Zm00001d017576_P001 | Maize | nucleus, plastid | 7.03 | 35.29 |
| GSMUA_Achr5P05710_001 | Banana | plastid | 33.26 | 34.8 |
| Zm00001d039978_P001 | Maize | nucleus, plastid | 6.79 | 34.12 |
| Zm00001d005881_P002 | Maize | nucleus | 27.17 | 31.02 |
| Zm00001d010608_P001 | Maize | nucleus | 11.01 | 29.19 |
| Os02t0767000-01 | Rice | nucleus | 33.49 | 28.21 |
| GSMUA_Achr3P07010_001 | Banana | nucleus | 35.13 | 26.22 |
| CDY17058 | Canola | nucleus, plastid | 31.15 | 25.83 |
| Zm00001d020329_P001 | Maize | plastid | 11.24 | 25.81 |
| CDY43217 | Canola | nucleus | 30.91 | 25.58 |
| TraesCS6A01G333200.1 | Wheat | nucleus | 33.26 | 24.78 |
| KXG31173 | Sorghum | nucleus | 33.49 | 24.49 |
| Zm00001d052157_P006 | Maize | plastid | 32.79 | 24.26 |
| TraesCS6B01G363600.1 | Wheat | nucleus | 33.02 | 24.02 |
| KXG35763 | Sorghum | nucleus | 34.19 | 23.59 |
| HORVU5Hr1G068200.5 | Barley | nucleus | 33.26 | 23.09 |
| HORVU6Hr1G080620.6 | Barley | nucleus | 33.02 | 23.0 |
| TraesCS5A01G237300.2 | Wheat | nucleus | 33.49 | 22.99 |
| TraesCS5D01G244300.2 | Wheat | nucleus | 33.02 | 22.93 |
| TraesCS5B01G235500.1 | Wheat | nucleus | 33.02 | 22.93 |
| Zm00001d020708_P001 | Maize | cytosol | 33.02 | 22.93 |
| Os08t0471800-01 | Rice | nucleus | 32.32 | 22.92 |
| Os09t0456100-01 | Rice | nucleus | 32.79 | 22.58 |
| Zm00001d018179_P015 | Maize | nucleus | 31.85 | 21.55 |
| KXG25311 | Sorghum | nucleus | 28.57 | 19.68 |
| TraesCS6D01G312000.1 | Wheat | nucleus, plastid | 32.79 | 19.66 |
| Zm00001d050017_P001 | Maize | nucleus | 27.4 | 17.44 |
Protein Annotations
| EnsemblPlants:CDX75626 | EnsemblPlantsGene:GSBRNA2T00121542001 | InterPro:Remorin_C | ncoils:Coil | PANTHER:PTHR31471 | PANTHER:PTHR31471:SF2 |
| PFAM:PF03763 | ProteinID:CDX75626 | ProteinID:CDX75626.1 | SEG:seg | UniParc:UPI0004EE500B | MapMan:35.2 |
Description
BnaA01g00760D
Coordinates
chrLK031804:+:1969315..1970997
Molecular Weight (calculated)
46478.0 Da
IEP (calculated)
10.530
GRAVY (calculated)
-0.711
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKTSLSSNS FGGFLSPGAA PSSYSDNKGW SSERVPHPSS STASSTPTLN NGHGPRRHLG SSSALTTPFY SGRAVPSKWE DAERWICSPV AAYPPGVCAN
101: LSSQFSEQRR QKSKSGPIVP PTLPHPPPYS PRLRAMEAAP KGLMVSGSPF STGVLEAERV FRGSVGGSGG GGGHGHSRSW VDLMSEETSS LSSKTDTEDR
201: KGTAAQSPVV SRRDIATQMS PEEMSPNNNP QELLLSPPLV VSVIDEPPPC RGGGEVREVK MDKGAKMIKR PKRRVMSSSS RVIMRREEQP PEVEDNSEAS
301: ASSSSWDISE PAMTRSKLQR EEAKIAAWEN LQKAKAEAAI RKLEVKLEKK KSASMDKILN KLQSAKLKAQ EMRRSSVSVS SDHQQEQQQV SRNSVKITHL
401: VRRHTFMTPF MACFAPRVDC RKSPSAL
101: LSSQFSEQRR QKSKSGPIVP PTLPHPPPYS PRLRAMEAAP KGLMVSGSPF STGVLEAERV FRGSVGGSGG GGGHGHSRSW VDLMSEETSS LSSKTDTEDR
201: KGTAAQSPVV SRRDIATQMS PEEMSPNNNP QELLLSPPLV VSVIDEPPPC RGGGEVREVK MDKGAKMIKR PKRRVMSSSS RVIMRREEQP PEVEDNSEAS
301: ASSSSWDISE PAMTRSKLQR EEAKIAAWEN LQKAKAEAAI RKLEVKLEKK KSASMDKILN KLQSAKLKAQ EMRRSSVSVS SDHQQEQQQV SRNSVKITHL
401: VRRHTFMTPF MACFAPRVDC RKSPSAL
001: MRKTSVSSNS FGGFLSPGAP SYADNKGWSS ERVPHPSSTT SSSAINGGRR HIGSSSALTT PFYSGRAIPS KWEDAERWIC SPVSTYPQGV CLNSSVSSEQ
101: RRQKSKSGPI VPPTLPHPHP TSSSSATGCY HYSPRMMMRS MDAPPKGLMV AGSPFSTGVL EADRVFRGSV GGGGCDGYGR GPGHGHSRSW VDLMSEETSS
201: LSSKTDTEEK AEMTTAMQSP VVSRRDMATQ MSPEETSPNN NNQSPPLVVS VIEPPPCRGE VREVKMDKGA RMIKRPKRRV MSSRIIRREQ PEVEDNSEAS
301: ASSSSWDISE PAMTLSKLQR EEAKIAAWEN LQKAKAEAAI RKLEVKLEKK KSASMDKILN KLQTAKIKAQ EMRRSSVSSE HEQQQGNHQI SRNSVKITHL
401: VRRHTFMTPF MTCFAPRVDC RKSSSAL
101: RRQKSKSGPI VPPTLPHPHP TSSSSATGCY HYSPRMMMRS MDAPPKGLMV AGSPFSTGVL EADRVFRGSV GGGGCDGYGR GPGHGHSRSW VDLMSEETSS
201: LSSKTDTEEK AEMTTAMQSP VVSRRDMATQ MSPEETSPNN NNQSPPLVVS VIEPPPCRGE VREVKMDKGA RMIKRPKRRV MSSRIIRREQ PEVEDNSEAS
301: ASSSSWDISE PAMTLSKLQR EEAKIAAWEN LQKAKAEAAI RKLEVKLEKK KSASMDKILN KLQTAKIKAQ EMRRSSVSSE HEQQQGNHQI SRNSVKITHL
401: VRRHTFMTPF MTCFAPRVDC RKSSSAL
Arabidopsis Description
Remorin family protein [Source:UniProtKB/TrEMBL;Acc:O23188]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.