Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 1
- cytosol 2
- plastid 1
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G018470.1 | |
| HORVU0Hr1G021800.1 | |
| HORVU0Hr1G025410.1 | |
| HORVU1Hr1G001860.1 | |
| HORVU1Hr1G008160.1 | |
| HORVU1Hr1G054930.3 | |
| HORVU1Hr1G092980.14 | |
| HORVU2Hr1G056160.5 | |
| HORVU2Hr1G067660.1 | |
| HORVU2Hr1G072180.1 | |
| HORVU2Hr1G072210.1 | |
| HORVU2Hr1G112000.1 | |
| HORVU3Hr1G021300.1 | |
| HORVU3Hr1G023970.2 | |
| HORVU3Hr1G027730.1 | |
| HORVU3Hr1G054660.1 | |
| HORVU3Hr1G055550.3 | |
| HORVU3Hr1G113750.1 | |
| HORVU4Hr1G047410.2 | |
| HORVU4Hr1G048730.1 | |
| HORVU5Hr1G068200.5 | |
| HORVU5Hr1G080210.1 | |
| HORVU5Hr1G092190.1 | |
| HORVU5Hr1G117990.1 | |
| HORVU6Hr1G021570.1 | |
| HORVU6Hr1G023630.1 | |
| HORVU6Hr1G066640.4 | |
| HORVU6Hr1G080620.6 | |
| HORVU7Hr1G078010.1 | |
| HORVU7Hr1G082720.10 | |
| HORVU7Hr1G097840.6 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G07840.1 | HORVU0Hr1G018470.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU0Hr1G025410.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU1Hr1G008160.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU2Hr1G056160.5 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU2Hr1G067660.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU2Hr1G112000.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU3Hr1G021300.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU3Hr1G054660.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU3Hr1G113750.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU4Hr1G047410.2 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU4Hr1G048730.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU6Hr1G023630.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU7Hr1G078010.1 | AT1G22920.1 | 21798944 |
| AT5G07840.1 | HORVU3Hr1G027730.1 | AT3G01340.1 | 21798944 |
| AT5G61230.1 | HORVU6Hr1G021570.1 | AT1G51600.1 | 21798944 |
| AT5G61230.1 | HORVU7Hr1G097840.6 | AT1G51600.1 | 21798944 |
| AT5G61230.1 | HORVU1Hr1G001860.1 | AT2G05230.1 | 21798944 |
| AT5G61230.1 | HORVU1Hr1G001860.1 | AT2G05250.1 | 21798944 |
| AT5G61230.1 | HORVU3Hr1G023970.2 | AT3G15660.1 | 21798944 |
| AT5G61230.1 | HORVU2Hr1G072180.1 | AT3G44720.1 | 21798944 |
| AT5G61230.1 | HORVU2Hr1G072210.1 | AT3G44720.1 | 21798944 |
| AT5G61230.1 | HORVU5Hr1G092190.1 | AT3G44720.1 | 21798944 |
| AT5G61230.1 | HORVU0Hr1G021800.1 | AT4G01090.1 | 21798944 |
| AT5G61230.1 | HORVU1Hr1G092980.14 | AT4G01090.1 | 21798944 |
| AT5G61230.1 | HORVU3Hr1G055550.3 | AT4G01090.1 | 21798944 |
| AT5G61230.1 | HORVU7Hr1G082720.10 | AT4G01090.1 | 21798944 |
| AT5G61230.1 | HORVU1Hr1G054930.3 | AT4G17680.1 | 21798944 |
| AT5G61230.1 | HORVU6Hr1G066640.4 | AT4G17680.1 | 21798944 |
| AT5G61230.1 | HORVU5Hr1G068200.5 | AT4G36970.1 | 21798944 |
| AT5G61230.1 | HORVU6Hr1G080620.6 | AT4G36970.1 | 21798944 |
| AT5G61230.1 | HORVU5Hr1G080210.1 | AT5G51910.1 | 21798944 |
| AT5G61230.1 | HORVU5Hr1G117990.1 | AT5G51910.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G006600.1 | Wheat | cytosol | 97.01 | 96.43 |
| TraesCS6B01G009600.1 | Wheat | mitochondrion | 97.01 | 95.86 |
| TraesCS6A01G004600.1 | Wheat | mitochondrion | 97.01 | 95.86 |
| TraesCS2B01G597300.1 | Wheat | cytosol | 93.41 | 92.86 |
| Zm00001d014925_P001 | Maize | mitochondrion | 87.43 | 87.95 |
| Os02t0102600-01 | Rice | cytosol, mitochondrion | 86.83 | 87.35 |
| EES06098 | Sorghum | cytosol, mitochondrion | 85.03 | 86.06 |
| VIT_02s0087g00100.t01 | Wine grape | cytosol | 71.86 | 68.97 |
| PGSC0003DMT400075540 | Potato | cytosol, mitochondrion | 62.28 | 68.42 |
| PGSC0003DMT400011414 | Potato | cytosol | 67.66 | 66.86 |
| Solyc08g005910.2.1 | Tomato | cytosol | 67.66 | 66.86 |
| GSMUA_Achr9P23190_001 | Banana | cytosol | 68.26 | 66.28 |
| KRH39707 | Soybean | cytosol | 68.26 | 66.28 |
| KRH76405 | Soybean | cytosol | 67.66 | 65.7 |
| Solyc12g096260.1.1 | Tomato | cytosol | 47.9 | 62.5 |
| CDY02163 | Canola | cytosol, mitochondrion | 61.08 | 58.29 |
| Bra012976.1-P | Field mustard | cytosol, mitochondrion | 61.08 | 58.29 |
| AT5G61230.1 | Thale cress | cytosol, plastid | 60.48 | 58.05 |
| CDY23077 | Canola | cytosol | 61.08 | 57.95 |
| CDX87205 | Canola | cytosol, mitochondrion | 60.48 | 54.3 |
| AT5G07840.1 | Thale cress | cytosol | 56.29 | 53.71 |
| CDY16818 | Canola | cytosol, mitochondrion | 60.48 | 53.44 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EMBL:AK368312 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| UniProt:F2DWP4 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU6Hr1G001980 | EnsemblPlants:HORVU6Hr1G001980.1 |
| InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF13637 | PRINTS:PR01415 | PFscan:PS50088 |
| PFscan:PS50297 | PANTHER:PTHR45189 | SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI000200731B | SEG:seg |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DWP4]
Coordinates
chrchr6H:+:5695266..5698973
Molecular Weight (calculated)
18531.9 Da
IEP (calculated)
8.755
GRAVY (calculated)
-0.638
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQLRSSLSM TRVRARADSD ADDRGWNQLH VAARKGNLKE VRRLLNEGMD VNAPAWGPKS PGATPLHLAA QGGHVKIMDE LLERGANIDA RTKGACGWTP
101: LHIAAKERNK RVVRFLIENG AFLPPDLNDH RFNPPLHYCS GLEWAYEMKR MQDESDSGGE ASFSSSN
101: LHIAAKERNK RVVRFLIENG AFLPPDLNDH RFNPPLHYCS GLEWAYEMKR MQDESDSGGE ASFSSSN
001: MLQEPSAAFS LRRNSFRRRS PRSNVDDRGW NPLHIKARKG DLKSVKQLLD QGMDVNALAW GPKSKGVSAL HLAAEGGHIE VMDLLLERGA NIDAKTWGSC
101: GWTPLHAAAK ERKREAVKFL VENGAFLADD ITDTRFNPPV HYCHGLEWAY EEMKKLNSES SSSSGGDTSS SSDN
101: GWTPLHAAAK ERKREAVKFL VENGAFLADD ITDTRFNPPV HYCHGLEWAY EEMKKLNSES SSSSGGDTSS SSDN
Arabidopsis Description
PIA2Phytochrome-interacting ankyrin-repeat protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.