Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058534 | Potato | nucleus | 89.73 | 88.77 |
| Solyc02g094290.1.1 | Tomato | cytosol | 15.41 | 50.44 |
| KRH57263 | Soybean | nucleus | 44.86 | 47.98 |
| KRH03994 | Soybean | nucleus | 43.78 | 47.65 |
| VIT_02s0025g04590.t01 | Wine grape | nucleus | 50.81 | 45.74 |
| Solyc03g006800.1.1 | Tomato | nucleus | 37.57 | 42.64 |
| GSMUA_Achr3P12320_001 | Banana | cytosol | 18.38 | 33.66 |
| GSMUA_Achr4P27220_001 | Banana | nucleus | 18.65 | 31.36 |
| GSMUA_Achr11P... | Banana | nucleus | 18.38 | 30.09 |
| Solyc01g008230.2.1 | Tomato | nucleus | 19.73 | 29.32 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 25.14 | 29.25 |
| TraesCS4A01G355900.1 | Wheat | nucleus | 22.7 | 28.38 |
| Zm00001d031725_P001 | Maize | nucleus | 26.49 | 28.0 |
| Solyc09g008030.1.1 | Tomato | plastid | 15.14 | 27.86 |
| GSMUA_Achr8P00050_001 | Banana | cytoskeleton, cytosol, peroxisome | 25.68 | 27.7 |
| OQU80770 | Sorghum | nucleus | 26.49 | 27.3 |
| GSMUA_Achr5P03320_001 | Banana | cytosol | 13.78 | 26.98 |
| TraesCS5D01G516300.1 | Wheat | nucleus | 24.86 | 26.74 |
| Solyc04g009180.1.1 | Tomato | nucleus | 19.19 | 26.69 |
| TraesCS5B01G516200.1 | Wheat | cytosol, nucleus, peroxisome | 25.14 | 26.65 |
| Solyc02g068200.1.1 | Tomato | nucleus | 19.19 | 26.1 |
| Os08t0544800-01 | Rice | nucleus | 25.95 | 25.74 |
| HORVU5Hr1G117990.1 | Barley | cytosol, mitochondrion, nucleus | 25.41 | 25.07 |
| Solyc06g065190.1.1 | Tomato | nucleus | 18.92 | 21.54 |
| Solyc06g070900.2.1 | Tomato | nucleus | 23.51 | 20.91 |
| HORVU5Hr1G080210.1 | Barley | cytosol | 15.14 | 20.51 |
| EER99208 | Sorghum | nucleus | 17.84 | 20.25 |
| Solyc05g007420.1.1 | Tomato | nucleus | 20.81 | 20.1 |
| Solyc03g116320.2.1 | Tomato | nucleus | 22.16 | 20.05 |
| Zm00001d006165_P001 | Maize | nucleus | 17.84 | 20.0 |
| Solyc11g020670.1.1 | Tomato | nucleus | 19.46 | 19.25 |
| TraesCS5B01G310000.1 | Wheat | cytosol, nucleus, peroxisome | 17.57 | 19.17 |
| TraesCS5D01G316300.1 | Wheat | nucleus | 17.3 | 19.16 |
| TraesCS5A01G309300.1 | Wheat | cytosol, nucleus, peroxisome | 17.3 | 18.93 |
| Os09t0521300-00 | Rice | nucleus | 18.38 | 17.85 |
| Solyc01g103780.2.1 | Tomato | nucleus | 19.46 | 16.18 |
Protein Annotations
| MapMan:15.5.19 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | UniProt:K4CP15 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF15 | EnsemblPlantsGene:Solyc08g080150.1 | EnsemblPlants:Solyc08g080150.1.1 |
| InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI000276B702 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr8:+:63485002..63486114
Molecular Weight (calculated)
39741.7 Da
IEP (calculated)
7.326
GRAVY (calculated)
-0.497
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSFHDPDDD CGTSELSNGA AGDLNDQKMD GHAVADDKKL VFSAMKEEPF DSDHHTLVPS MPMPVATAAP PRRSSTKDRH TKVEGRGRRI RIPATCAARI
101: FQLTRELGHK SDGETVRWLL EQAEQSIIEA TGTGTVPAIA VSVNGTLKIP TSSPASNPEI DENHPQKRRR KSSNSEFIDV GSLNRNAANV SQFAPVTTTP
201: ATITTAPPPG FVPVWGMSNG GMMVPSNAIW MIPATVPPAQ VNVTNNNNVV LQYPQLWTPV FNLATRPIPS FVTAATINTN GPPAIMIAGP LSVNNGAATT
301: TGPKIGSNKS SMAPASLSSS TDKNNNNTND VKPHMLRDFS LEIYDRKELQ LMSRSGNHQQ ETQVTSSERS
101: FQLTRELGHK SDGETVRWLL EQAEQSIIEA TGTGTVPAIA VSVNGTLKIP TSSPASNPEI DENHPQKRRR KSSNSEFIDV GSLNRNAANV SQFAPVTTTP
201: ATITTAPPPG FVPVWGMSNG GMMVPSNAIW MIPATVPPAQ VNVTNNNNVV LQYPQLWTPV FNLATRPIPS FVTAATINTN GPPAIMIAGP LSVNNGAATT
301: TGPKIGSNKS SMAPASLSSS TDKNNNNTND VKPHMLRDFS LEIYDRKELQ LMSRSGNHQQ ETQVTSSERS
001: MATIQKLEEV AGKDQTLRAV DLTIINGVRN VETSRPFQVN PTVSLEPKAE PVMPSFSMSL APPSSTGPPL KRASTKDRHT KVEGRGRRIR MPATCAARIF
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH
Arabidopsis Description
TCP9Transcription factor TCP9 [Source:UniProtKB/Swiss-Prot;Acc:O64647]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.