Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022568.1-P | Field mustard | cytosol | 99.28 | 93.27 |
| CDX91612 | Canola | nucleus | 95.7 | 92.71 |
| AT5G51910.1 | Thale cress | nucleus | 75.63 | 72.01 |
| KRG91429 | Soybean | nucleus | 50.54 | 43.25 |
| KRH35393 | Soybean | nucleus | 47.67 | 42.77 |
| CDX95656 | Canola | nucleus | 44.09 | 41.98 |
| CDX74756 | Canola | nucleus | 46.95 | 40.31 |
| CDY53888 | Canola | nucleus | 44.8 | 40.19 |
| CDY18910 | Canola | nucleus | 46.59 | 40.0 |
| Solyc03g006800.1.1 | Tomato | nucleus | 45.52 | 38.96 |
| PGSC0003DMT400062327 | Potato | nucleus | 47.67 | 36.34 |
| CDY40752 | Canola | cytosol | 22.94 | 36.16 |
| CDX78335 | Canola | nucleus | 22.58 | 35.8 |
| CDX81094 | Canola | nucleus | 22.94 | 35.56 |
| GSMUA_Achr3P12320_001 | Banana | cytosol | 24.73 | 34.16 |
| CDX87179 | Canola | nucleus | 25.45 | 33.02 |
| CDY16842 | Canola | nucleus | 25.09 | 32.56 |
| CDY36943 | Canola | nucleus | 21.86 | 32.28 |
| CDY44770 | Canola | cytosol | 25.81 | 32.0 |
| GSMUA_Achr11P... | Banana | nucleus | 24.37 | 30.09 |
| CDY40799 | Canola | nucleus | 24.73 | 30.0 |
| CDY21536 | Canola | nucleus | 25.09 | 29.66 |
| CDY60249 | Canola | cytosol | 21.86 | 29.33 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 33.33 | 29.25 |
| CDY46951 | Canola | nucleus | 24.01 | 29.13 |
| GSMUA_Achr5P03320_001 | Banana | cytosol | 19.71 | 29.1 |
| TraesCS4A01G355900.1 | Wheat | nucleus | 30.47 | 28.72 |
| GSMUA_Achr4P27220_001 | Banana | nucleus | 22.22 | 28.18 |
| CDY45760 | Canola | nucleus | 24.37 | 28.1 |
| GSMUA_Achr8P00050_001 | Banana | cytoskeleton, cytosol, peroxisome | 33.69 | 27.41 |
| CDY20065 | Canola | cytosol | 26.16 | 27.14 |
| TraesCS5D01G516300.1 | Wheat | nucleus | 33.33 | 27.03 |
| TraesCS5B01G516200.1 | Wheat | cytosol, nucleus, peroxisome | 33.69 | 26.93 |
| CDX88010 | Canola | nucleus | 24.37 | 26.88 |
| Zm00001d031725_P001 | Maize | nucleus | 33.69 | 26.86 |
| CDY48964 | Canola | nucleus | 21.15 | 26.82 |
| OQU80770 | Sorghum | nucleus | 34.05 | 26.46 |
| CDY00171 | Canola | nucleus | 25.81 | 26.09 |
| CDY24170 | Canola | nucleus | 22.58 | 25.93 |
| Os08t0544800-01 | Rice | nucleus | 34.05 | 25.47 |
| CDY28576 | Canola | nucleus | 28.67 | 25.16 |
| HORVU5Hr1G117990.1 | Barley | cytosol, mitochondrion, nucleus | 33.69 | 25.07 |
| CDY68276 | Canola | nucleus, plastid | 28.32 | 24.61 |
| CDY01754 | Canola | nucleus, plastid | 28.32 | 24.46 |
| CDY13675 | Canola | nucleus | 27.24 | 24.44 |
| CDY52403 | Canola | nucleus | 26.52 | 24.26 |
| CDY28577 | Canola | cytosol | 20.79 | 23.87 |
| HORVU5Hr1G080210.1 | Barley | cytosol | 23.3 | 23.81 |
| CDX96370 | Canola | nucleus | 27.6 | 22.99 |
| TraesCS5A01G309300.1 | Wheat | cytosol, nucleus, peroxisome | 27.6 | 22.78 |
| CDX72856 | Canola | nucleus | 27.24 | 22.75 |
| TraesCS5D01G316300.1 | Wheat | nucleus | 27.24 | 22.75 |
| TraesCS5B01G310000.1 | Wheat | cytosol, nucleus, peroxisome | 27.24 | 22.42 |
| EER99208 | Sorghum | nucleus | 26.16 | 22.39 |
| CDY03666 | Canola | nucleus, plastid | 27.6 | 21.69 |
| CDX82193 | Canola | nucleus, plastid | 27.24 | 21.59 |
| Zm00001d006165_P001 | Maize | nucleus | 24.37 | 20.61 |
| Os09t0521300-00 | Rice | nucleus | 27.24 | 19.95 |
| CDY71135 | Canola | nucleus | 27.6 | 19.64 |
| CDY39914 | Canola | nucleus, plastid | 27.24 | 19.29 |
Protein Annotations
| MapMan:15.5.19 | UniProt:A0A078GPG3 | EnsemblPlants:CDY27099 | ProteinID:CDY27099 | ProteinID:CDY27099.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00036925001 | InterPro:IPR017887 | PFAM:PF03634 | PFscan:PS51369 |
| PANTHER:PTHR31072 | PANTHER:PTHR31072:SF15 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI0004EE5141 | SEG:seg |
Description
BnaA02g11190DBnaA02g11190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPG3]
Coordinates
chrLK032199:+:508889..509728
Molecular Weight (calculated)
29980.0 Da
IEP (calculated)
5.747
GRAVY (calculated)
-0.633
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNLEGKVV HLSDPDPETN RGMLLKQEDD DPNKQQEVGF LQPVTAPKRP PSKDRHTKVE GRGRRIRMPA GCAARIFQLT RELGHKSDGE TIRWLLERSE
101: PAIIEATGTG TIPAIAVSVN GALKIPTDST PQFESDGGSG KRRRRNCTSE FVDINRQDSS VTSGLAPITA SSYGVNLMNV NAQSFVPFWQ TGFVTGGPNQ
201: MGHMWAIPTV AAPSFLNGGG TRPVPSYVSN TSDAEPQMGT SGGGGDEGTT QTLRDFSLET YDKKELQFLG GSGDNTSPS
101: PAIIEATGTG TIPAIAVSVN GALKIPTDST PQFESDGGSG KRRRRNCTSE FVDINRQDSS VTSGLAPITA SSYGVNLMNV NAQSFVPFWQ TGFVTGGPNQ
201: MGHMWAIPTV AAPSFLNGGG TRPVPSYVSN TSDAEPQMGT SGGGGDEGTT QTLRDFSLET YDKKELQFLG GSGDNTSPS
001: MESNHEGNAI QVIDQVTTMT HLSDPNPKTK PGMMLMKQED GYLQPVKTKP APKRPTSKDR HTKVEGRGRR IRMPAGCAAR VFQLTRELGH KSDGETIRWL
101: LERAEPAIIE ATGTGTVPAI AVSVNGTLKI PTSSPVLNDG GRDGDGDLIK KRRKRNCTSD FVDVNDSCHS SVTSGLAPIT ASNYGVNILN VNTQGFVPFW
201: PMGMGTAFVT GGPDQMGQMW AIPTVATAPF LNVGARPVSS YVSNASDAEA EMETSGGGTT QPLRDFSLEI YDKRELQFLG GSGNSSPSSC HET
101: LERAEPAIIE ATGTGTVPAI AVSVNGTLKI PTSSPVLNDG GRDGDGDLIK KRRKRNCTSD FVDVNDSCHS SVTSGLAPIT ASNYGVNILN VNTQGFVPFW
201: PMGMGTAFVT GGPDQMGQMW AIPTVATAPF LNVGARPVSS YVSNASDAEA EMETSGGGTT QPLRDFSLEI YDKRELQFLG GSGNSSPSSC HET
Arabidopsis Description
TCP19Transcription factor TCP19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT89]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.