Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72856 | Canola | nucleus | 95.22 | 95.51 |
| Bra016090.1-P | Field mustard | nucleus | 99.1 | 93.26 |
| CDY03666 | Canola | nucleus, plastid | 80.9 | 76.34 |
| CDX82193 | Canola | nucleus, plastid | 79.7 | 75.85 |
| AT1G72010.1 | Thale cress | nucleus, plastid | 80.0 | 71.47 |
| CDY40752 | Canola | cytosol | 24.18 | 45.76 |
| CDX87179 | Canola | nucleus | 29.25 | 45.58 |
| CDY16842 | Canola | nucleus | 28.96 | 45.12 |
| CDX78335 | Canola | nucleus | 22.99 | 43.75 |
| CDX81094 | Canola | nucleus | 22.99 | 42.78 |
| CDY44770 | Canola | cytosol | 28.66 | 42.67 |
| CDY45760 | Canola | nucleus | 28.96 | 40.08 |
| CDY21536 | Canola | nucleus | 27.76 | 39.41 |
| CDY46951 | Canola | nucleus | 26.87 | 39.13 |
| CDY36943 | Canola | nucleus | 21.79 | 38.62 |
| CDX88010 | Canola | nucleus | 28.96 | 38.34 |
| CDY40799 | Canola | nucleus | 26.27 | 38.26 |
| CDY24170 | Canola | nucleus | 22.39 | 30.86 |
| CDY28577 | Canola | cytosol | 21.79 | 30.04 |
| CDY01754 | Canola | nucleus, plastid | 28.66 | 29.72 |
| CDY68276 | Canola | nucleus, plastid | 28.36 | 29.59 |
| CDY28576 | Canola | nucleus | 28.06 | 29.56 |
| CDY27099 | Canola | nucleus | 22.99 | 27.6 |
| CDY60249 | Canola | cytosol | 17.01 | 27.4 |
| CDX91612 | Canola | nucleus | 22.99 | 26.74 |
| CDX95656 | Canola | nucleus | 22.99 | 26.28 |
| CDY48964 | Canola | nucleus | 16.72 | 25.45 |
| CDX74756 | Canola | nucleus | 24.48 | 25.23 |
| CDY20065 | Canola | cytosol | 20.0 | 24.91 |
| CDY53888 | Canola | nucleus | 22.99 | 24.76 |
| CDY00171 | Canola | nucleus | 20.3 | 24.64 |
| CDY18910 | Canola | nucleus | 23.88 | 24.62 |
| CDY52403 | Canola | nucleus | 22.09 | 24.26 |
| VIT_18s0117g00340.t01 | Wine grape | nucleus | 25.07 | 23.66 |
| CDY13675 | Canola | nucleus | 21.49 | 23.15 |
| CDY71135 | Canola | nucleus | 26.57 | 22.7 |
| CDY39914 | Canola | nucleus, plastid | 26.27 | 22.34 |
| Solyc01g103780.2.1 | Tomato | nucleus | 27.16 | 20.45 |
| GSMUA_Achr6P17840_001 | Banana | cytosol | 23.58 | 20.36 |
| PGSC0003DMT400064164 | Potato | nucleus | 30.45 | 19.1 |
| GSMUA_Achr10P... | Banana | nucleus | 22.69 | 18.81 |
Protein Annotations
| EnsemblPlants:CDX96370 | EnsemblPlantsGene:GSBRNA2T00102522001 | InterPro:IPR017887 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | PANTHER:PTHR31072 |
| PANTHER:PTHR31072:SF70 | PFAM:PF03634 | PFscan:PS51369 | ProteinID:CDX96370 | ProteinID:CDX96370.1 | SEG:seg |
| UniParc:UPI0004EEFD6F | MapMan:15.5.19 | : | : | : | : |
Description
BnaA07g29810D
Coordinates
chrLK031894:+:519457..520723
Molecular Weight (calculated)
34796.6 Da
IEP (calculated)
7.089
GRAVY (calculated)
-0.629
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: METRTAEEAS LQLNSTENPS PGGGSVPSTA LAVVKSAVKK PSKDRHTKVD GRGRRIRMPA VCAARVFQLT RELGHKSDGE TIEWLLQQAE PAIIATTGTG
101: TIPANFSTLN ASLRGGGGGG GSTVFAQSSK SSSLPMSFHG SGMSLYDDSN GANGSSSSVV VDHSRKEDYF NKESEVPSGS SQKPGQFQDQ ELGPGPGMGR
201: GTPTASVVPQ PMWAVAPGST NGGSAFWMLP MSGSGGREQM QQQQPGHQMW AFNPGSYPVG TGRVVTAAPM GSMMLGGQQL GLGVAEGNMA AALRGGRGGD
301: GLGMTLEQHQ HQHHQQHQEP NNQGEASENG GDDKK
101: TIPANFSTLN ASLRGGGGGG GSTVFAQSSK SSSLPMSFHG SGMSLYDDSN GANGSSSSVV VDHSRKEDYF NKESEVPSGS SQKPGQFQDQ ELGPGPGMGR
201: GTPTASVVPQ PMWAVAPGST NGGSAFWMLP MSGSGGREQM QQQQPGHQMW AFNPGSYPVG TGRVVTAAPM GSMMLGGQQL GLGVAEGNMA AALRGGRGGD
301: GLGMTLEQHQ HQHHQQHQEP NNQGEASENG GDDKK
001: MNQNSSVAEA TLQLNSGEKP SPGSIPFISS GQHGNISTSA TSSTSTSSGS ALAVVKSAVK KPTKDRHTKV DGRGRRIRMP AMCAARVFQL TRELGHKSDG
101: ETIEWLLQQA EPAIIASTGT GTIPANFSTL NASLRSGGGS TLFSQASKSS SSPLSFHSTG MSLYEDNNGT NGSSVDPSRK LLNSAANAAV FGFHHQMYPP
201: IMSTERNPNT LVKPYREDYF KEPSSAAEPS ESSQKASQFQ EQELAQGRGT ANVVPQPMWA VAPGTTNGGS AFWMLPMSGS GGREQMQQQP GHQMWAFNPG
301: NYPVGTGRVV TAPMGSMMLG GQQLGLGVAE GNMAAAMRGS RGDGLAMTLD QHQHQLQHQE PNQSQASENG GDDKK
101: ETIEWLLQQA EPAIIASTGT GTIPANFSTL NASLRSGGGS TLFSQASKSS SSPLSFHSTG MSLYEDNNGT NGSSVDPSRK LLNSAANAAV FGFHHQMYPP
201: IMSTERNPNT LVKPYREDYF KEPSSAAEPS ESSQKASQFQ EQELAQGRGT ANVVPQPMWA VAPGTTNGGS AFWMLPMSGS GGREQMQQQP GHQMWAFNPG
301: NYPVGTGRVV TAPMGSMMLG GQQLGLGVAE GNMAAAMRGS RGDGLAMTLD QHQHQLQHQE PNQSQASENG GDDKK
Arabidopsis Description
TCP22Transcription factor TCP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.