Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82193 | Canola | nucleus, plastid | 98.03 | 98.86 |
| Bra008001.1-P | Field mustard | nucleus, plastid | 99.44 | 94.39 |
| CDX96370 | Canola | nucleus | 76.34 | 80.9 |
| AT1G72010.1 | Thale cress | nucleus, plastid | 85.35 | 80.8 |
| CDX72856 | Canola | nucleus | 74.93 | 79.64 |
| CDX87179 | Canola | nucleus | 26.76 | 44.19 |
| CDY40752 | Canola | cytosol | 21.97 | 44.07 |
| CDY16842 | Canola | nucleus | 26.48 | 43.72 |
| CDX78335 | Canola | nucleus | 20.85 | 42.05 |
| CDX81094 | Canola | nucleus | 21.13 | 41.67 |
| CDY44770 | Canola | cytosol | 25.92 | 40.89 |
| CDY45760 | Canola | nucleus | 26.76 | 39.26 |
| CDY46951 | Canola | nucleus | 25.35 | 39.13 |
| CDY40799 | Canola | nucleus | 25.07 | 38.7 |
| CDY36943 | Canola | nucleus | 20.56 | 38.62 |
| CDY21536 | Canola | nucleus | 25.35 | 38.14 |
| CDX88010 | Canola | nucleus | 26.2 | 36.76 |
| CDY24170 | Canola | nucleus | 20.85 | 30.45 |
| CDY01754 | Canola | nucleus, plastid | 26.48 | 29.1 |
| CDY68276 | Canola | nucleus, plastid | 26.2 | 28.97 |
| CDY28576 | Canola | nucleus | 25.92 | 28.93 |
| CDY28577 | Canola | cytosol | 19.72 | 28.81 |
| CDY60249 | Canola | cytosol | 16.34 | 27.88 |
| CDY27099 | Canola | nucleus | 21.69 | 27.6 |
| CDX91612 | Canola | nucleus | 21.69 | 26.74 |
| CDX95656 | Canola | nucleus | 21.69 | 26.28 |
| CDY48964 | Canola | nucleus | 15.77 | 25.45 |
| CDX74756 | Canola | nucleus | 22.82 | 24.92 |
| VIT_18s0117g00340.t01 | Wine grape | nucleus | 24.79 | 24.79 |
| CDY53888 | Canola | nucleus | 21.69 | 24.76 |
| CDY18910 | Canola | nucleus | 22.25 | 24.31 |
| CDY20065 | Canola | cytosol | 18.31 | 24.16 |
| CDY00171 | Canola | nucleus | 18.59 | 23.91 |
| CDY52403 | Canola | nucleus | 20.28 | 23.61 |
| CDY71135 | Canola | nucleus | 25.35 | 22.96 |
| CDY39914 | Canola | nucleus, plastid | 25.07 | 22.59 |
| CDY13675 | Canola | nucleus | 19.72 | 22.51 |
| Solyc01g103780.2.1 | Tomato | nucleus | 26.76 | 21.35 |
| GSMUA_Achr6P17840_001 | Banana | cytosol | 22.54 | 20.62 |
| PGSC0003DMT400064164 | Potato | nucleus | 29.3 | 19.48 |
| GSMUA_Achr10P... | Banana | nucleus | 20.85 | 18.32 |
Protein Annotations
| EnsemblPlants:CDY03666 | EnsemblPlantsGene:GSBRNA2T00116452001 | InterPro:IPR017887 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | PANTHER:PTHR31072 |
| PANTHER:PTHR31072:SF70 | PFAM:PF03634 | PFscan:PS51369 | ProteinID:CDY03666 | ProteinID:CDY03666.1 | SEG:seg |
| UniParc:UPI0004EE6C29 | MapMan:15.5.19 | : | : | : | : |
Description
BnaA02g15710D
Coordinates
chrLK031945:-:301278..302630
Molecular Weight (calculated)
37357.6 Da
IEP (calculated)
8.496
GRAVY (calculated)
-0.689
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQNSHDRPT AEAGLQLNST ENPSPGRSVP FAGGATSSST STSSGTALAV VKPAAKKPSK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE
101: WLLQQAEPAI IASTGTGTIP ANFSTLNATL RGGGGSTIFA QSSKSSPFHS TGMSLYEDTA QNAAVFGFHH QGYQPIMSAE RNPPTLGKPY REDYFKESEP
201: SGSSQKPGQF QEQEMGPGPG MGRGTANVVP QPMWAVAPGT TNGGSAFWML PMSGSGGREQ MQQQPGHQMW AFNPGSYPVG TGRVVTAPMG SMMLGGQQLG
301: LGVAEGNMAA AMRGSRGGGG DGLAMTLDQH QHQHHQQHQE PNQSQASENG GDDKK
101: WLLQQAEPAI IASTGTGTIP ANFSTLNATL RGGGGSTIFA QSSKSSPFHS TGMSLYEDTA QNAAVFGFHH QGYQPIMSAE RNPPTLGKPY REDYFKESEP
201: SGSSQKPGQF QEQEMGPGPG MGRGTANVVP QPMWAVAPGT TNGGSAFWML PMSGSGGREQ MQQQPGHQMW AFNPGSYPVG TGRVVTAPMG SMMLGGQQLG
301: LGVAEGNMAA AMRGSRGGGG DGLAMTLDQH QHQHHQQHQE PNQSQASENG GDDKK
001: MNQNSSVAEA TLQLNSGEKP SPGSIPFISS GQHGNISTSA TSSTSTSSGS ALAVVKSAVK KPTKDRHTKV DGRGRRIRMP AMCAARVFQL TRELGHKSDG
101: ETIEWLLQQA EPAIIASTGT GTIPANFSTL NASLRSGGGS TLFSQASKSS SSPLSFHSTG MSLYEDNNGT NGSSVDPSRK LLNSAANAAV FGFHHQMYPP
201: IMSTERNPNT LVKPYREDYF KEPSSAAEPS ESSQKASQFQ EQELAQGRGT ANVVPQPMWA VAPGTTNGGS AFWMLPMSGS GGREQMQQQP GHQMWAFNPG
301: NYPVGTGRVV TAPMGSMMLG GQQLGLGVAE GNMAAAMRGS RGDGLAMTLD QHQHQLQHQE PNQSQASENG GDDKK
101: ETIEWLLQQA EPAIIASTGT GTIPANFSTL NASLRSGGGS TLFSQASKSS SSPLSFHSTG MSLYEDNNGT NGSSVDPSRK LLNSAANAAV FGFHHQMYPP
201: IMSTERNPNT LVKPYREDYF KEPSSAAEPS ESSQKASQFQ EQELAQGRGT ANVVPQPMWA VAPGTTNGGS AFWMLPMSGS GGREQMQQQP GHQMWAFNPG
301: NYPVGTGRVV TAPMGSMMLG GQQLGLGVAE GNMAAAMRGS RGDGLAMTLD QHQHQLQHQE PNQSQASENG GDDKK
Arabidopsis Description
TCP22Transcription factor TCP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.