Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78335 | Canola | nucleus | 83.62 | 84.09 |
| CDX81094 | Canola | nucleus | 83.05 | 81.67 |
| CDY44770 | Canola | cytosol | 96.05 | 75.56 |
| CDY21536 | Canola | nucleus | 87.57 | 65.68 |
| CDY16842 | Canola | nucleus | 76.27 | 62.79 |
| CDX87179 | Canola | nucleus | 75.14 | 61.86 |
| CDY45760 | Canola | nucleus | 80.23 | 58.68 |
| CDX88010 | Canola | nucleus | 81.36 | 56.92 |
| CDY46951 | Canola | nucleus | 73.45 | 56.52 |
| Os03t0422702-00 | Rice | cytosol, plastid | 40.11 | 56.35 |
| CDY40799 | Canola | nucleus | 72.88 | 56.09 |
| Zm00001d018530_P001 | Maize | plastid | 57.06 | 48.79 |
| Os02t0828566-01 | Rice | nucleus | 62.15 | 46.61 |
| Solyc04g009180.1.1 | Tomato | nucleus | 67.8 | 45.11 |
| Solyc01g008230.2.1 | Tomato | nucleus | 63.28 | 44.98 |
| EES07800 | Sorghum | plastid | 60.45 | 44.03 |
| TraesCS6D01G397000.1 | Wheat | mitochondrion | 47.46 | 42.64 |
| TraesCS6A01G412800.1 | Wheat | mitochondrion | 47.46 | 42.42 |
| TraesCS6B01G462100.1 | Wheat | mitochondrion | 47.46 | 42.42 |
| HORVU6Hr1G093960.1 | Barley | cytosol, peroxisome | 61.02 | 40.45 |
| CDY36943 | Canola | nucleus | 37.85 | 35.45 |
| CDY24170 | Canola | nucleus | 37.85 | 27.57 |
| CDY60249 | Canola | cytosol | 31.64 | 26.92 |
| CDY48964 | Canola | nucleus | 31.64 | 25.45 |
| CDX72856 | Canola | nucleus | 45.76 | 24.25 |
| CDX96370 | Canola | nucleus | 45.76 | 24.18 |
| PGSC0003DMT400042166 | Potato | cytosol | 61.02 | 24.11 |
| CDY20065 | Canola | cytosol | 35.03 | 23.05 |
| CDY27099 | Canola | nucleus | 36.16 | 22.94 |
| CDX95656 | Canola | nucleus | 37.85 | 22.87 |
| CDY28577 | Canola | cytosol | 31.07 | 22.63 |
| CDY28576 | Canola | nucleus | 40.11 | 22.33 |
| CDY00171 | Canola | nucleus | 34.46 | 22.1 |
| CDY03666 | Canola | nucleus, plastid | 44.07 | 21.97 |
| CDX82193 | Canola | nucleus, plastid | 43.5 | 21.88 |
| CDY53888 | Canola | nucleus | 38.42 | 21.86 |
| CDY68276 | Canola | nucleus, plastid | 39.55 | 21.81 |
| CDY01754 | Canola | nucleus, plastid | 39.55 | 21.67 |
| CDX91612 | Canola | nucleus | 35.03 | 21.53 |
| CDY52403 | Canola | nucleus | 36.72 | 21.31 |
| CDY13675 | Canola | nucleus | 36.72 | 20.9 |
| CDX74756 | Canola | nucleus | 36.16 | 19.69 |
| CDY18910 | Canola | nucleus | 35.59 | 19.38 |
| CDY39914 | Canola | nucleus, plastid | 41.81 | 18.78 |
| CDY71135 | Canola | nucleus | 40.68 | 18.37 |
Protein Annotations
| MapMan:15.5.19 | MapMan:27.1.5.3 | UniProt:A0A078HSE2 | EnsemblPlants:CDY40752 | ProteinID:CDY40752 | ProteinID:CDY40752.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00071649001 | InterPro:IPR017887 | PFAM:PF03634 |
| PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF73 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI0004EE9527 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng06150DBnaAnng06150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSE2]
Coordinates
chrLK032478:-:119603..120630
Molecular Weight (calculated)
18875.4 Da
IEP (calculated)
11.079
GRAVY (calculated)
-0.465
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MENNDGAMTN GVIINKGPLN AVKKPPTKDR HSKVDGRGRR IRMPIICAAR VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAS FSTASLSASS
101: SPFALGKRML FTQQQQAATL FVRQQQQQQH ASAAVAAMGE ASAARVGNYL PGHHLNLLAS LSGGSPGSGR REEDDSR
101: SPFALGKRML FTQQQQAATL FVRQQQQQQH ASAAVAAMGE ASAARVGNYL PGHHLNLLAS LSGGSPGSGR REEDDSR
001: MADNDGAVSN GIIVEQTSNK GPLNAVKKPP SKDRHSKVDG RGRRIRMPII CAARVFQLTR ELGHKSDGQT IEWLLRQAEP SIIAATGTGT TPASFSTASL
101: STSSPFTLGK RVVRAEEGES GGGGGGGLTV GHTMGTSLMG GGGSGGFWAV PARPDFGQVW SFATGAPPEM VFAQQQQPAT LFVRHQQQQQ ASAAAAAAMG
201: EASAARVGNY LPGHHLNLLA SLSGGANGSG RREDDHEPR
101: STSSPFTLGK RVVRAEEGES GGGGGGGLTV GHTMGTSLMG GGGSGGFWAV PARPDFGQVW SFATGAPPEM VFAQQQQPAT LFVRHQQQQQ ASAAAAAAMG
201: EASAARVGNY LPGHHLNLLA SLSGGANGSG RREDDHEPR
Arabidopsis Description
TCP21Transcription factor TCP21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.