Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96370 | Canola | nucleus | 95.51 | 95.22 |
| Bra016090.1-P | Field mustard | nucleus | 95.51 | 89.61 |
| CDY03666 | Canola | nucleus, plastid | 79.64 | 74.93 |
| CDX82193 | Canola | nucleus, plastid | 78.44 | 74.43 |
| AT1G72010.1 | Thale cress | nucleus, plastid | 79.94 | 71.2 |
| CDX87179 | Canola | nucleus | 29.64 | 46.05 |
| CDY40752 | Canola | cytosol | 24.25 | 45.76 |
| CDY16842 | Canola | nucleus | 29.34 | 45.58 |
| CDX78335 | Canola | nucleus | 23.35 | 44.32 |
| CDX81094 | Canola | nucleus | 23.05 | 42.78 |
| CDY44770 | Canola | cytosol | 28.74 | 42.67 |
| CDY45760 | Canola | nucleus | 29.34 | 40.5 |
| CDY46951 | Canola | nucleus | 27.54 | 40.0 |
| CDY21536 | Canola | nucleus | 27.84 | 39.41 |
| CDY40799 | Canola | nucleus | 26.95 | 39.13 |
| CDX88010 | Canola | nucleus | 29.34 | 38.74 |
| CDY36943 | Canola | nucleus | 21.86 | 38.62 |
| CDY24170 | Canola | nucleus | 22.46 | 30.86 |
| CDY28577 | Canola | cytosol | 22.16 | 30.45 |
| CDY68276 | Canola | nucleus, plastid | 28.74 | 29.91 |
| CDY28576 | Canola | nucleus | 28.44 | 29.87 |
| CDY01754 | Canola | nucleus, plastid | 28.74 | 29.72 |
| CDY27099 | Canola | nucleus | 22.75 | 27.24 |
| CDY60249 | Canola | cytosol | 16.77 | 26.92 |
| CDX91612 | Canola | nucleus | 22.75 | 26.39 |
| CDX95656 | Canola | nucleus | 23.05 | 26.28 |
| CDY48964 | Canola | nucleus | 16.77 | 25.45 |
| CDX74756 | Canola | nucleus | 24.55 | 25.23 |
| CDY20065 | Canola | cytosol | 20.06 | 24.91 |
| CDY53888 | Canola | nucleus | 23.05 | 24.76 |
| CDY00171 | Canola | nucleus | 20.36 | 24.64 |
| CDY18910 | Canola | nucleus | 23.95 | 24.62 |
| CDY52403 | Canola | nucleus | 22.16 | 24.26 |
| VIT_18s0117g00340.t01 | Wine grape | nucleus | 25.75 | 24.23 |
| CDY71135 | Canola | nucleus | 27.25 | 23.21 |
| CDY13675 | Canola | nucleus | 21.56 | 23.15 |
| CDY39914 | Canola | nucleus, plastid | 27.25 | 23.1 |
| Solyc01g103780.2.1 | Tomato | nucleus | 28.44 | 21.35 |
| GSMUA_Achr6P17840_001 | Banana | cytosol | 23.95 | 20.62 |
| PGSC0003DMT400064164 | Potato | nucleus | 31.74 | 19.85 |
| GSMUA_Achr10P... | Banana | nucleus | 22.75 | 18.81 |
Protein Annotations
| EnsemblPlants:CDX72856 | EnsemblPlantsGene:GSBRNA2T00103257001 | InterPro:IPR017887 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | PANTHER:PTHR31072 |
| PANTHER:PTHR31072:SF70 | PFAM:PF03634 | PFscan:PS51369 | ProteinID:CDX72856 | ProteinID:CDX72856.1 | SEG:seg |
| UniParc:UPI0004EE2848 | MapMan:15.5.19 | : | : | : | : |
Description
BnaC06g33040D
Coordinates
chrLK031797:+:713176..714246
Molecular Weight (calculated)
34907.7 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.634
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: METRTVEEAS LQLNSTENPS PGGGSVPTTS SNTAALAVVK SAVKKPCKDR HTKVDGRGRR IRMPAVCAAR VFQLTRELGH KSDGETIEWL LQQAEPAIIA
101: TTGTGTIPAN FSTLNASLRG GGGGFAQSSK SSSLPMSFHG SGMSLYDDSN GSNGSSSSAV VDHSRKLEDY FKESDEVTGG SSQKPGQFQD QELGPGMGRE
201: TPTASVVPQP MWAVAPGSTN GGSAFWMLPM SGSGGREQMQ QQQPGHQMWA FNPGSYPVGT GRVVTAAPMG SMMLGGQQLG LGVAEGNMAA ALRGGRGGDG
301: LGMTLEQHQH QHHQQHQEPN NQGEASENGG DDKK
101: TTGTGTIPAN FSTLNASLRG GGGGFAQSSK SSSLPMSFHG SGMSLYDDSN GSNGSSSSAV VDHSRKLEDY FKESDEVTGG SSQKPGQFQD QELGPGMGRE
201: TPTASVVPQP MWAVAPGSTN GGSAFWMLPM SGSGGREQMQ QQQPGHQMWA FNPGSYPVGT GRVVTAAPMG SMMLGGQQLG LGVAEGNMAA ALRGGRGGDG
301: LGMTLEQHQH QHHQQHQEPN NQGEASENGG DDKK
001: MNQNSSVAEA TLQLNSGEKP SPGSIPFISS GQHGNISTSA TSSTSTSSGS ALAVVKSAVK KPTKDRHTKV DGRGRRIRMP AMCAARVFQL TRELGHKSDG
101: ETIEWLLQQA EPAIIASTGT GTIPANFSTL NASLRSGGGS TLFSQASKSS SSPLSFHSTG MSLYEDNNGT NGSSVDPSRK LLNSAANAAV FGFHHQMYPP
201: IMSTERNPNT LVKPYREDYF KEPSSAAEPS ESSQKASQFQ EQELAQGRGT ANVVPQPMWA VAPGTTNGGS AFWMLPMSGS GGREQMQQQP GHQMWAFNPG
301: NYPVGTGRVV TAPMGSMMLG GQQLGLGVAE GNMAAAMRGS RGDGLAMTLD QHQHQLQHQE PNQSQASENG GDDKK
101: ETIEWLLQQA EPAIIASTGT GTIPANFSTL NASLRSGGGS TLFSQASKSS SSPLSFHSTG MSLYEDNNGT NGSSVDPSRK LLNSAANAAV FGFHHQMYPP
201: IMSTERNPNT LVKPYREDYF KEPSSAAEPS ESSQKASQFQ EQELAQGRGT ANVVPQPMWA VAPGTTNGGS AFWMLPMSGS GGREQMQQQP GHQMWAFNPG
301: NYPVGTGRVV TAPMGSMMLG GQQLGLGVAE GNMAAAMRGS RGDGLAMTLD QHQHQLQHQE PNQSQASENG GDDKK
Arabidopsis Description
TCP22Transcription factor TCP22 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G4]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.