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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana nucleus 37.63 36.14
Zm00001d004791_P001 Maize mitochondrion, nucleus 19.07 36.1
GSMUA_Achr3P12320_001 Banana cytosol 17.53 33.66
KRH06094 Soybean plastid 31.19 33.52
GSMUA_Achr5P03320_001 Banana cytosol 15.46 31.75
GSMUA_Achr6P02720_001 Banana nucleus 21.39 30.74
AT1G35560.1 Thale cress nucleus, plastid 26.55 30.21
Solyc06g065190.1.1 Tomato nucleus 25.0 29.85
GSMUA_AchrUn_... Banana cytosol, extracellular, nucleus 16.24 29.72
PGSC0003DMT400067150 Potato nucleus, plastid 25.0 29.66
GSMUA_Achr11P... Banana cytosol, nucleus, plastid 18.56 29.51
VIT_12s0035g00690.t01 Wine grape nucleus, plastid 34.79 29.35
GSMUA_Achr4P27220_001 Banana nucleus 16.49 29.09
GSMUA_Achr4P00500_001 Banana nucleus 20.36 29.04
GSMUA_Achr11P... Banana nucleus 16.75 28.76
HORVU5Hr1G035980.1 Barley cytosol 28.09 28.61
TraesCS4B01G093700.1 Wheat nucleus, plastid 27.84 28.35
HORVU4Hr1G019380.1 Barley nucleus, plastid 27.84 28.12
GSMUA_Achr7P20990_001 Banana nucleus 19.33 27.99
GSMUA_Achr2P10690_001 Banana cytosol, mitochondrion, nucleus, plastid 15.21 27.96
VIT_18s0117g00340.t01 Wine grape nucleus 25.52 27.89
TraesCS4D01G090500.1 Wheat nucleus, plastid 27.58 27.79
TraesCS4A01G222700.1 Wheat nucleus, plastid 27.58 27.79
Os12t0173300-00 Rice nucleus 29.64 27.51
KRH26343 Soybean nucleus, plastid 30.67 27.42
Zm00001d053020_P001 Maize cytosol, nucleus, plastid 27.06 27.13
Solyc11g020670.1.1 Tomato nucleus 26.03 27.01
Os11t0175700-00 Rice nucleus, plastid 27.84 26.6
TraesCS5A01G121800.1 Wheat nucleus 28.35 26.25
Zm00001d023565_P001 Maize nucleus 27.32 26.17
CDY71135 Canola nucleus 26.29 26.02
PGSC0003DMT400023981 Potato nucleus 26.03 25.96
Zm00001d041866_P001 Maize nucleus 27.84 25.96
Bra027886.1-P Field mustard nucleus, plastid 26.29 25.89
CDY39914 Canola nucleus, plastid 26.29 25.89
TraesCS5B01G117100.1 Wheat nucleus 27.58 25.66
AT1G58100.1 Thale cress nucleus 26.29 25.44
GSMUA_Achr10P... Banana nucleus 14.95 24.68
GSMUA_Achr6P07930_001 Banana cytosol 14.95 24.47
CDX72856 Canola nucleus 20.62 23.95
CDX96370 Canola nucleus 20.36 23.58
GSMUA_Achr7P17990_001 Banana nucleus 20.1 23.21
Solyc01g103780.2.1 Tomato nucleus 26.55 23.15
Bra016090.1-P Field mustard nucleus 21.13 23.03
GSMUA_AchrUn_... Banana nucleus 13.4 22.91
GSMUA_Achr1P27500_001 Banana nucleus 17.01 22.84
CDX82193 Canola nucleus, plastid 20.62 22.73
PGSC0003DMT400064164 Potato nucleus 31.19 22.66
CDY03666 Canola nucleus, plastid 20.62 22.54
Bra008001.1-P Field mustard nucleus, plastid 21.39 22.19
GSMUA_Achr11P... Banana nucleus 14.18 22.09
AT1G72010.1 Thale cress nucleus, plastid 20.88 21.6
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 17.27 21.07
GSMUA_Achr6P36470_001 Banana nucleus 20.62 21.05
GSMUA_Achr11P... Banana nucleus 14.95 20.21
GSMUA_Achr7P23010_001 Banana nucleus 15.46 19.8
GSMUA_Achr7P02680_001 Banana nucleus 14.69 19.39
GSMUA_Achr5P25030_001 Banana nucleus 14.18 19.16
GSMUA_Achr8P00050_001 Banana cytoskeleton, cytosol, peroxisome 15.98 18.08
Protein Annotations
MapMan:15.5.19GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr6G17840_001EnsemblPlants:GSMUA_Achr6P17840_001
EnsemblPlants:GSMUA_Achr6T17840_001InterPro:IPR017887UniProt:M0T7Y2PFAM:PF03634PFscan:PS51369PANTHER:PTHR31072
PANTHER:PTHR31072:SF36InterPro:TF_TCP_subgrInterPro:Transcription_factor_TCPUniParc:UPI00029650FASEG:seg:
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G17840_001]
Coordinates
chr6:+:12018070..12020574
Molecular Weight (calculated)
42047.7 Da
IEP (calculated)
7.455
GRAVY (calculated)
-0.322
Length
388 amino acids
Sequence
(BLAST)
001: MPAICAARVF QLTRELGHKT DGETIEWLLQ QAEPAIIAAT GTGTIPANFS TLNISLRSSG SSFSAPASKS APLSFHALAL AHHRPDFELH QLLSADQIGE
101: GLQGGVGSGG GDSTDTYLRK RFRGDLFKDE QQTPPQHQEG GGGAGPSPPG ILPAAAMWAV APNSAAGGAF WMLPMSAGSA APAVAAATGT IQAPLQFMSR
201: QPTSGVAAQH LGLGTSETNL GMLAALNAYN RGGGLSMNSE HHHPMDHHHQ AHTHQQQQSA DSDEDNHTMF FQLVKEYFHR FSFFYFCSIL LECCDFKNLI
301: CGSKWAARVG NKDLYRDPIR LCSIILCLFE REREREREEE RGQYTVCRCS PIKAISGRTF LIRIVRGRTR GEGPCSSDPS HHVVSARR
Best Arabidopsis Sequence Match ( AT1G58100.1 )
(BLAST)
001: MDLSDIRNNN NDTAAVATGG GARQLVDASL SIVPRSTPPE DSTLATTSST ATATTTKRST KDRHTKVDGR GRRIRMPALC AARVFQLTRE LGHKSDGETI
101: EWLLQQAEPA IVAATGTGTI PANFSTLSVS LRSSGSTLSA PPSKSVPLYG ALGLTHHQYD EQGGGGVFAA HTSPLLGFHH QLQHHQNQNQ NQDPVETIPE
201: GENFSRKRYR SVDLSKENDD RKQNENKSLK ESETSGPTAA PMWAVAPPSR SGAGNTFWML PVPTTAGNQM ESSSNNNTAA GHRAPPMWPF VNSAGGGAGG
301: GGGAATHFMA GTGFSFPMDQ YRGSPLQLGS FLAQPQPTQN LGLSMPDSNL GMLAALNSAY SRGGNANANA EQANNAVEHQ EKQQQSDHDD DSREENSNSS
401: E
Arabidopsis Description
TCP8Transcription factor TCP8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C518]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.