Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004929.1-P | Field mustard | nucleus | 98.77 | 99.07 |
| CDY18910 | Canola | nucleus | 95.69 | 95.69 |
| CDX95656 | Canola | nucleus | 73.23 | 81.23 |
| CDY53888 | Canola | nucleus | 76.92 | 80.39 |
| AT2G45680.1 | Thale cress | cytosol | 78.15 | 71.35 |
| VIT_15s0048g01150.t01 | Wine grape | nucleus | 52.92 | 50.74 |
| KRH48289 | Soybean | nucleus | 52.0 | 50.45 |
| KRH65181 | Soybean | nucleus | 51.38 | 49.7 |
| CDY27099 | Canola | nucleus | 40.31 | 46.95 |
| CDX91612 | Canola | nucleus | 40.31 | 45.49 |
| CDX78335 | Canola | nucleus | 20.0 | 36.93 |
| GSMUA_Achr3P12320_001 | Banana | cytosol | 22.77 | 36.63 |
| CDY36943 | Canola | nucleus | 21.23 | 36.51 |
| CDX87179 | Canola | nucleus | 24.0 | 36.28 |
| CDY40752 | Canola | cytosol | 19.69 | 36.16 |
| CDX81094 | Canola | nucleus | 20.0 | 36.11 |
| CDY16842 | Canola | nucleus | 23.69 | 35.81 |
| GSMUA_Achr11P... | Banana | nucleus | 24.62 | 35.4 |
| CDY46951 | Canola | nucleus | 24.0 | 33.91 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 32.92 | 33.65 |
| PGSC0003DMT400088049 | Potato | cytosol | 27.69 | 33.33 |
| GSMUA_Achr4P27220_001 | Banana | nucleus | 22.46 | 33.18 |
| PGSC0003DMT400094424 | Potato | cytosol | 24.92 | 33.06 |
| CDY40799 | Canola | nucleus | 23.08 | 32.61 |
| CDY44770 | Canola | cytosol | 22.46 | 32.44 |
| CDY21536 | Canola | nucleus | 23.38 | 32.2 |
| GSMUA_Achr5P03320_001 | Banana | cytosol | 18.46 | 31.75 |
| CDY60249 | Canola | cytosol | 20.0 | 31.25 |
| CDY45760 | Canola | nucleus | 23.08 | 30.99 |
| GSMUA_Achr8P00050_001 | Banana | cytoskeleton, cytosol, peroxisome | 32.62 | 30.9 |
| TraesCS4A01G355900.1 | Wheat | nucleus | 27.38 | 30.07 |
| CDX88010 | Canola | nucleus | 23.08 | 29.64 |
| CDY24170 | Canola | nucleus | 22.15 | 29.63 |
| CDY48964 | Canola | nucleus | 20.0 | 29.55 |
| Zm00001d031725_P001 | Maize | nucleus | 31.08 | 28.86 |
| TraesCS5D01G516300.1 | Wheat | nucleus | 30.46 | 28.78 |
| TraesCS5B01G516200.1 | Wheat | cytosol, nucleus, peroxisome | 30.46 | 28.37 |
| OQU80770 | Sorghum | nucleus | 31.08 | 28.13 |
| Os08t0544800-01 | Rice | nucleus | 32.0 | 27.88 |
| CDY20065 | Canola | cytosol | 22.77 | 27.51 |
| CDY28576 | Canola | nucleus | 26.46 | 27.04 |
| CDY00171 | Canola | nucleus | 22.77 | 26.81 |
| HORVU5Hr1G117990.1 | Barley | cytosol, mitochondrion, nucleus | 30.46 | 26.4 |
| CDY68276 | Canola | nucleus, plastid | 25.85 | 26.17 |
| CDY01754 | Canola | nucleus, plastid | 25.85 | 26.01 |
| CDY52403 | Canola | nucleus | 23.38 | 24.92 |
| CDX72856 | Canola | nucleus | 25.23 | 24.55 |
| CDX96370 | Canola | nucleus | 25.23 | 24.48 |
| CDY13675 | Canola | nucleus | 23.38 | 24.44 |
| CDY28577 | Canola | cytosol | 17.85 | 23.87 |
| CDY03666 | Canola | nucleus, plastid | 24.92 | 22.82 |
| CDX82193 | Canola | nucleus, plastid | 24.62 | 22.73 |
| HORVU5Hr1G080210.1 | Barley | cytosol | 19.08 | 22.71 |
| EER99208 | Sorghum | nucleus | 21.23 | 21.17 |
| CDY39914 | Canola | nucleus, plastid | 25.54 | 21.07 |
| CDY71135 | Canola | nucleus | 25.23 | 20.92 |
| Zm00001d006165_P001 | Maize | nucleus | 21.23 | 20.91 |
| TraesCS5A01G309300.1 | Wheat | cytosol, nucleus, peroxisome | 20.92 | 20.12 |
| TraesCS5D01G316300.1 | Wheat | nucleus | 20.62 | 20.06 |
| TraesCS5B01G310000.1 | Wheat | cytosol, nucleus, peroxisome | 20.92 | 20.06 |
| Os09t0521300-00 | Rice | nucleus | 22.15 | 18.9 |
Protein Annotations
| EnsemblPlants:CDX74756 | EnsemblPlantsGene:GSBRNA2T00116725001 | InterPro:IPR017887 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | PANTHER:PTHR31072 |
| PANTHER:PTHR31072:SF69 | PFAM:PF03634 | PFscan:PS51369 | ProteinID:CDX74756 | ProteinID:CDX74756.1 | SEG:seg |
| UniParc:UPI0004EEF2A6 | MapMan:15.5.19 | : | : | : | : |
Description
BnaA05g05020D
Coordinates
chrLK031802:-:482546..483523
Molecular Weight (calculated)
34581.2 Da
IEP (calculated)
10.180
GRAVY (calculated)
-0.260
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIKHHEDE RLRAVDLTSK PFEVNNAVSL EPKTEPSLES SLQVPSTSMS LAPPSRPPLK RASTKDRHTK VEGRGRRIRM PATCAARIFQ LTRELGHKSD
101: GETIRWLLEN AEPAIIAATG TGTVPAIAMS VNGTLKIPTT TNADSDVGDN SAKKRRKRPS NSEYIDINEA VTVSVSSGLA PISSGLAPIS SGLAPVTTVS
201: QQTLPQGMIP MWAIPSNAVI PTVGAFFLVP HVAGPTNQPQ MLAFPAAPPS SYVAAVQQAS LMARPPFVSV STPSVMAPSS SSGVTNRGSS SSTTNMLRDF
301: SLEIYEKQEL HQFMSTTTAR SSSNH
101: GETIRWLLEN AEPAIIAATG TGTVPAIAMS VNGTLKIPTT TNADSDVGDN SAKKRRKRPS NSEYIDINEA VTVSVSSGLA PISSGLAPIS SGLAPVTTVS
201: QQTLPQGMIP MWAIPSNAVI PTVGAFFLVP HVAGPTNQPQ MLAFPAAPPS SYVAAVQQAS LMARPPFVSV STPSVMAPSS SSGVTNRGSS SSTTNMLRDF
301: SLEIYEKQEL HQFMSTTTAR SSSNH
001: MATIQKLEEV AGKDQTLRAV DLTIINGVRN VETSRPFQVN PTVSLEPKAE PVMPSFSMSL APPSSTGPPL KRASTKDRHT KVEGRGRRIR MPATCAARIF
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH
Arabidopsis Description
TCP9Transcription factor TCP9 [Source:UniProtKB/Swiss-Prot;Acc:O64647]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.